RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 GLI3P10071 1580 aa8.87□□□□□ -0.99
CTNNA1-244ENST00000627109 AOX1Q06278 1338 aa8.87□□□□□ -0.99
CTNNA1-244ENST00000627109 EPB41L2O43491 1005 aaKnown RBP8.86□□□□□ -0.99
CTNNA1-244ENST00000627109 CD2BP2O95400 341 aaKnown RBP8.86□□□□□ -0.99
CTNNA1-244ENST00000627109 CYP2E1P05181 493 aaPredicted RBP8.86□□□□□ -0.99
CTNNA1-244ENST00000627109 HOXB7P09629 217 aa8.86□□□□□ -0.99
CTNNA1-244ENST00000627109 MEIS3Q99687 375 aa8.86□□□□□ -0.99
CTNNA1-244ENST00000627109 C5P01031 1676 aa8.86□□□□□ -0.99
CTNNA1-244ENST00000627109 GNAT3A8MTJ3 354 aa8.86□□□□□ -0.99
CTNNA1-244ENST00000627109 K7ELQ4 463 aaPredicted RBP8.86□□□□□ -0.99
CTNNA1-244ENST00000627109 STAP2Q9UGK3 403 aa8.86□□□□□ -0.99
CTNNA1-244ENST00000627109 MRC1P22897 1456 aa8.85□□□□□ -0.99
CTNNA1-244ENST00000627109 DDX11L8A8MPP1 907 aa8.85□□□□□ -0.99
CTNNA1-244ENST00000627109 GCP02774 474 aa8.85□□□□□ -0.99
CTNNA1-244ENST00000627109 LAMB4A4D0S4 1761 aa8.85□□□□□ -0.99
CTNNA1-244ENST00000627109 G2E3Q7L622 706 aa8.85□□□□□ -0.99
CTNNA1-244ENST00000627109 IL17REQ8NFR9 667 aa8.85□□□□□ -0.99
CTNNA1-244ENST00000627109 NLRP2Q9NX02 1062 aa8.85□□□□□ -0.99
CTNNA1-244ENST00000627109 SLC4A2P04920 1241 aa8.85□□□□□ -0.99
CTNNA1-244ENST00000627109 HSP90AB1P08238 724 aaKnown RBP8.85□□□□□ -0.99
CTNNA1-244ENST00000627109 PTMSP20962 102 aa8.85□□□□□ -0.99
CTNNA1-244ENST00000627109 RABEP1Q15276 862 aa8.85□□□□□ -0.99
CTNNA1-244ENST00000627109 IP6K1Q92551 441 aa8.84□□□□□ -0.99
CTNNA1-244ENST00000627109 TSPYL4Q9UJ04 414 aa8.84□□□□□ -0.99
CTNNA1-244ENST00000627109 STRCP1A6NGW2 1772 aa8.84□□□□□ -0.99
CTNNA1-244ENST00000627109 SDSP20132 328 aa8.84□□□□□ -0.99
CTNNA1-244ENST00000627109 L1TD1Q5T7N2 865 aaKnown RBP8.84□□□□□ -0.99
CTNNA1-244ENST00000627109 CCDC30Q5VVM6 783 aa8.83□□□□□ -1
CTNNA1-244ENST00000627109 ATP8B2P98198 1209 aa8.83□□□□□ -1
CTNNA1-244ENST00000627109 POLA2Q14181 598 aa8.83□□□□□ -1
CTNNA1-244ENST00000627109 C16orf71Q8IYS4 520 aaPredicted RBP8.83□□□□□ -1
CTNNA1-244ENST00000627109 TNPO1Q92973 898 aaKnown RBP8.83□□□□□ -1
CTNNA1-244ENST00000627109 PAPPAQ13219 1627 aa8.83□□□□□ -1
CTNNA1-244ENST00000627109 USP42Q9H9J4 1324 aaKnown RBP8.83□□□□□ -1
CTNNA1-244ENST00000627109 HMMRO75330 724 aa8.83□□□□□ -1
CTNNA1-244ENST00000627109 FLIIQ13045 1269 aa8.83□□□□□ -1
CTNNA1-244ENST00000627109 RTF1Q92541 710 aaKnown RBP8.83□□□□□ -1
CTNNA1-244ENST00000627109 PXDNQ92626 1479 aa8.83□□□□□ -1
CTNNA1-244ENST00000627109 SPATA31A3Q5VYP0 1347 aa8.82□□□□□ -1
CTNNA1-244ENST00000627109 TAF7Q15545 349 aaPredicted RBP8.82□□□□□ -1
CTNNA1-244ENST00000627109 TOM1L2Q6ZVM7 507 aa8.82□□□□□ -1
CTNNA1-244ENST00000627109 OTUD7AQ8TE49 926 aaPredicted RBP8.82□□□□□ -1
CTNNA1-244ENST00000627109 ANO8Q9HCE9 1232 aaPredicted RBP8.82□□□□□ -1
CTNNA1-244ENST00000627109 BTG4Q9NY30 223 aa8.82□□□□□ -1
CTNNA1-244ENST00000627109 UBR2Q8IWV8 1755 aa8.82□□□□□ -1
CTNNA1-244ENST00000627109 GNAI2P04899 355 aa8.82□□□□□ -1
CTNNA1-244ENST00000627109 PDE1AP54750 535 aa8.82□□□□□ -1
CTNNA1-244ENST00000627109 FAM43AQ8N2R8 423 aa8.82□□□□□ -1
CTNNA1-244ENST00000627109 GNAI3P08754 354 aa8.82□□□□□ -1
CTNNA1-244ENST00000627109 SSH3Q8TE77 659 aa8.82□□□□□ -1
CTNNA1-244ENST00000627109 NAP1L5Q96NT1 182 aaPredicted RBP8.82□□□□□ -1
CTNNA1-244ENST00000627109 TRAK2O60296 914 aa8.81□□□□□ -1
CTNNA1-244ENST00000627109 KCNH5Q8NCM2 988 aa8.81□□□□□ -1
CTNNA1-244ENST00000627109 XIRP1Q702N8 1843 aaKnown RBP8.81□□□□□ -1
CTNNA1-244ENST00000627109 LTBP4Q8N2S1 1624 aa8.81□□□□□ -1
CTNNA1-244ENST00000627109 DCCP43146 1447 aa8.8□□□□□ -1
CTNNA1-244ENST00000627109 SKOR2Q2VWA4 1001 aaPredicted RBP8.8□□□□□ -1
CTNNA1-244ENST00000627109 EIF4A1P60842 406 aaKnown RBP8.8□□□□□ -1
CTNNA1-244ENST00000627109 MTX1Q13505 466 aa8.8□□□□□ -1
CTNNA1-244ENST00000627109 SLC4A10Q6U841 1118 aa8.8□□□□□ -1
CTNNA1-244ENST00000627109 USHBP1Q8N6Y0 703 aa8.8□□□□□ -1
CTNNA1-244ENST00000627109 SRCIN1Q9C0H9 1055 aa8.8□□□□□ -1
CTNNA1-244ENST00000627109 USP44Q9H0E7 712 aa8.8□□□□□ -1
CTNNA1-244ENST00000627109 MIS18AQ9NYP9 233 aa8.8□□□□□ -1
CTNNA1-244ENST00000627109 SOS2Q07890 1332 aaPredicted RBP8.8□□□□□ -1
CTNNA1-244ENST00000627109 NUP188Q5SRE5 1749 aa8.8□□□□□ -1
CTNNA1-244ENST00000627109 ANAPC15P60006 121 aa8.8□□□□□ -1
CTNNA1-244ENST00000627109 RBM42Q9BTD8 480 aaKnown RBP8.8□□□□□ -1
CTNNA1-244ENST00000627109 XRCC6P12956 609 aaKnown RBP eCLIP8.79□□□□□ -1
CTNNA1-244ENST00000627109 CWC22Q9HCG8 908 aaKnown RBP8.79□□□□□ -1
CTNNA1-244ENST00000627109 USP21Q9UK80 565 aa8.79□□□□□ -1
CTNNA1-244ENST00000627109 ARFGEF2Q9Y6D5 1785 aa8.79□□□□□ -1
CTNNA1-244ENST00000627109 ADCY9O60503 1353 aa8.79□□□□□ -1
CTNNA1-244ENST00000627109 ERC2O15083 957 aa8.79□□□□□ -1
CTNNA1-244ENST00000627109 STK31Q9BXU1 1019 aa8.79□□□□□ -1
CTNNA1-244ENST00000627109 UTYO14607 1347 aa8.79□□□□□ -1
CTNNA1-244ENST00000627109 PNMA6EA0A0J9YXQ4 647 aa8.79□□□□□ -1
CTNNA1-244ENST00000627109 F6X3S4 739 aa8.79□□□□□ -1
CTNNA1-244ENST00000627109 REC8O95072 547 aa8.79□□□□□ -1
CTNNA1-244ENST00000627109 CNKSR2Q8WXI2 1034 aa8.79□□□□□ -1
CTNNA1-244ENST00000627109 SHANK3Q9BYB0 1731 aa8.79□□□□□ -1
CTNNA1-244ENST00000627109 GBP4Q96PP9 640 aa8.78□□□□□ -1
CTNNA1-244ENST00000627109 JCADQ9P266 1359 aa8.78□□□□□ -1
CTNNA1-244ENST00000627109 SMARCA5O60264 1052 aaPredicted RBP8.78□□□□□ -1
CTNNA1-244ENST00000627109 RAB11FIP3O75154 756 aa8.78□□□□□ -1
CTNNA1-244ENST00000627109 NCLP19338 710 aaKnown RBP8.78□□□□□ -1
CTNNA1-244ENST00000627109 CUL4AQ13619 759 aa8.78□□□□□ -1
CTNNA1-244ENST00000627109 AKAP4Q5JQC9 854 aa8.78□□□□□ -1
CTNNA1-244ENST00000627109 ARHGEF25Q86VW2 580 aa8.78□□□□□ -1
CTNNA1-244ENST00000627109 LRRCC1Q9C099 1032 aa8.78□□□□□ -1
CTNNA1-244ENST00000627109 ABCA3Q99758 1704 aa8.78□□□□□ -1
CTNNA1-244ENST00000627109 NBPF6Q5VWK0 638 aa8.78□□□□□ -1
CTNNA1-244ENST00000627109 NBPF4Q96M43 638 aa8.78□□□□□ -1
CTNNA1-244ENST00000627109 ESYT1Q9BSJ8 1104 aa8.78□□□□□ -1
CTNNA1-244ENST00000627109 MRE11P49959 708 aa8.77□□□□□ -1
CTNNA1-244ENST00000627109 BEND3Q5T5X7 828 aa8.77□□□□□ -1
CTNNA1-244ENST00000627109 CASC1Q6TDU7 716 aa8.77□□□□□ -1
CTNNA1-244ENST00000627109 QTRT2Q9H974 415 aaKnown RBP8.77□□□□□ -1
CTNNA1-244ENST00000627109 COL15A1P39059 1388 aa8.77□□□□□ -1.01
CTNNA1-244ENST00000627109 GOLGA6L3A6NEY3 463 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms