RNA–Protein interactions for RNA: ENST00000626583.2

LINC01828-208, Transcript of long intergenic non-protein coding RNA 1828, human

TSL 5

Gene LINC01828, Length 848 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01828-208	ENST00000626583	NKX1-1	Q15270	411 aa	Predicted RBP	5.73	□□□□□ -1.49
LINC01828-208	ENST00000626583	ZNF516	Q92618	1163 aa		5.73	□□□□□ -1.49
LINC01828-208	ENST00000626583	TRPM3	Q9HCF6	1732 aa	Predicted RBP	5.73	□□□□□ -1.49
LINC01828-208	ENST00000626583	THSD7B	Q9C0I4	1608 aa		5.73	□□□□□ -1.49
LINC01828-208	ENST00000626583	OVOS2	A0A0G2JMS6	1433 aa		5.73	□□□□□ -1.49
LINC01828-208	ENST00000626583	OVOS2	A0A0J9YW53	1432 aa		5.73	□□□□□ -1.49
LINC01828-208	ENST00000626583	OVOS2	Q6IE36	1432 aa		5.73	□□□□□ -1.49
LINC01828-208	ENST00000626583	PNPLA7	Q6ZV29	1317 aa		5.73	□□□□□ -1.49
LINC01828-208	ENST00000626583	PIK3C2A	O00443	1686 aa		5.72	□□□□□ -1.49
LINC01828-208	ENST00000626583	CDC42BPG	Q6DT37	1551 aa		5.72	□□□□□ -1.49
LINC01828-208	ENST00000626583	ROBO2	Q9HCK4	1378 aa		5.72	□□□□□ -1.49
LINC01828-208	ENST00000626583	NUTM2F	A1L443	756 aa		5.72	□□□□□ -1.49
LINC01828-208	ENST00000626583	SAMD7	Q7Z3H4	446 aa		5.72	□□□□□ -1.49
LINC01828-208	ENST00000626583	ZNF598	Q86UK7	904 aa	Known RBP	5.72	□□□□□ -1.49
LINC01828-208	ENST00000626583	CRIPAK	Q8N1N5	446 aa		5.72	□□□□□ -1.49
LINC01828-208	ENST00000626583	LARP6	Q9BRS8	491 aa	Known RBP	5.72	□□□□□ -1.49
LINC01828-208	ENST00000626583	IGSF1	Q8N6C5	1336 aa		5.72	□□□□□ -1.49
LINC01828-208	ENST00000626583	INSM1	Q01101	510 aa	Predicted RBP	5.71	□□□□□ -1.5
LINC01828-208	ENST00000626583	CAMK2B	Q13554	666 aa		5.71	□□□□□ -1.5
LINC01828-208	ENST00000626583	SPRYD7	Q5W111	196 aa		5.71	□□□□□ -1.5
LINC01828-208	ENST00000626583	KRT28	Q7Z3Y7	464 aa		5.71	□□□□□ -1.5
LINC01828-208	ENST00000626583	STRN4	Q9NRL3	753 aa		5.71	□□□□□ -1.5
LINC01828-208	ENST00000626583	NHS	Q6T4R5	1651 aa		5.71	□□□□□ -1.5
LINC01828-208	ENST00000626583	HFM1	A2PYH4	1435 aa		5.71	□□□□□ -1.5
LINC01828-208	ENST00000626583	ARFGEF1	Q9Y6D6	1849 aa		5.71	□□□□□ -1.5
LINC01828-208	ENST00000626583	SLC19A1	P41440	591 aa		5.7	□□□□□ -1.5
LINC01828-208	ENST00000626583	BARGIN	Q6ZT62	677 aa		5.7	□□□□□ -1.5
LINC01828-208	ENST00000626583	SLC16A10	Q8TF71	515 aa		5.7	□□□□□ -1.5
LINC01828-208	ENST00000626583	LRRC4B	Q9NT99	713 aa		5.7	□□□□□ -1.5
LINC01828-208	ENST00000626583	KIF13B	Q9NQT8	1826 aa		5.69	□□□□□ -1.5
LINC01828-208	ENST00000626583	CCDC144A	A2RUR9	1427 aa		5.69	□□□□□ -1.5
LINC01828-208	ENST00000626583	MSL1	Q68DK7	614 aa		5.69	□□□□□ -1.5
LINC01828-208	ENST00000626583	NKX2-3	Q8TAU0	364 aa		5.69	□□□□□ -1.5
LINC01828-208	ENST00000626583	EMID1	Q96A84	441 aa	Predicted RBP	5.69	□□□□□ -1.5
LINC01828-208	ENST00000626583	LRPPRC	P42704	1394 aa	Known RBP	5.68	□□□□□ -1.5
LINC01828-208	ENST00000626583	CCNB3	Q8WWL7	1395 aa		5.68	□□□□□ -1.5
LINC01828-208	ENST00000626583	COL18A1	P39060	1754 aa		5.68	□□□□□ -1.5
LINC01828-208	ENST00000626583	GDF9	O60383	454 aa		5.68	□□□□□ -1.5
LINC01828-208	ENST00000626583	ZPR1	O75312	459 aa		5.68	□□□□□ -1.5
LINC01828-208	ENST00000626583	WFS1	O76024	890 aa		5.68	□□□□□ -1.5
LINC01828-208	ENST00000626583	DGKZ	Q13574	1117 aa		5.68	□□□□□ -1.5
LINC01828-208	ENST00000626583	CHRNA2	Q15822	529 aa		5.68	□□□□□ -1.5
LINC01828-208	ENST00000626583	LMOD2	Q6P5Q4	547 aa		5.68	□□□□□ -1.5
LINC01828-208	ENST00000626583	PRDM6	Q9NQX0	595 aa		5.68	□□□□□ -1.5
LINC01828-208	ENST00000626583	AAAS	Q9NRG9	546 aa		5.68	□□□□□ -1.5
LINC01828-208	ENST00000626583	CD2AP	Q9Y5K6	639 aa		5.68	□□□□□ -1.5
LINC01828-208	ENST00000626583	CCDC18	Q5T9S5	1454 aa		5.68	□□□□□ -1.5
LINC01828-208	ENST00000626583	NBPF26	B4DH59	902 aa		5.67	□□□□□ -1.5
LINC01828-208	ENST00000626583	SUPT5H	O00267	1087 aa	Known RBP	5.67	□□□□□ -1.5
LINC01828-208	ENST00000626583	PLA2G5	P39877	138 aa		5.67	□□□□□ -1.5
LINC01828-208	ENST00000626583	PRSS12	P56730	875 aa		5.67	□□□□□ -1.5
LINC01828-208	ENST00000626583	C9orf131	Q5VYM1	1079 aa		5.67	□□□□□ -1.5
LINC01828-208	ENST00000626583	ANKLE1	Q8NAG6	615 aa		5.67	□□□□□ -1.5
LINC01828-208	ENST00000626583	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	5.67	□□□□□ -1.5
LINC01828-208	ENST00000626583	CDCA7L	Q96GN5	454 aa		5.67	□□□□□ -1.5
LINC01828-208	ENST00000626583	SLC52A1	Q9NWF4	448 aa		5.67	□□□□□ -1.5
LINC01828-208	ENST00000626583	RBM27	Q9P2N5	1060 aa	Known RBP	5.67	□□□□□ -1.5
LINC01828-208	ENST00000626583	ITSN1	Q15811	1721 aa		5.67	□□□□□ -1.5
LINC01828-208	ENST00000626583	TIAM2	Q8IVF5	1701 aa		5.67	□□□□□ -1.5
LINC01828-208	ENST00000626583	IFT172	Q9UG01	1749 aa		5.67	□□□□□ -1.5
LINC01828-208	ENST00000626583	BRCA2	P51587	3418 aa		5.67	□□□□□ -1.5
LINC01828-208	ENST00000626583	KIF15	Q9NS87	1388 aa		5.67	□□□□□ -1.5
LINC01828-208	ENST00000626583	SSH2	Q76I76	1423 aa		5.66	□□□□□ -1.5
LINC01828-208	ENST00000626583	USP54	Q70EL1	1684 aa		5.66	□□□□□ -1.5
LINC01828-208	ENST00000626583	RNF223	E7ERA6	249 aa		5.66	□□□□□ -1.5
LINC01828-208	ENST00000626583	HDGF	P51858	240 aa	Known RBP	5.66	□□□□□ -1.5
LINC01828-208	ENST00000626583	LARP1	Q6PKG0	1096 aa	Known RBP	5.66	□□□□□ -1.5
LINC01828-208	ENST00000626583	PRR14	Q9BWN1	585 aa		5.66	□□□□□ -1.5
LINC01828-208	ENST00000626583	KDM2B	Q8NHM5	1336 aa		5.66	□□□□□ -1.5
LINC01828-208	ENST00000626583	IQGAP3	Q86VI3	1631 aa		5.66	□□□□□ -1.5
LINC01828-208	ENST00000626583	LMO7	Q8WWI1	1683 aa		5.66	□□□□□ -1.5
LINC01828-208	ENST00000626583	AVP	P01185	164 aa		5.65	□□□□□ -1.5
LINC01828-208	ENST00000626583	NFX1	Q12986	1120 aa	Known RBP	5.65	□□□□□ -1.5
LINC01828-208	ENST00000626583	MARCH10	Q8NA82	808 aa	Predicted RBP	5.65	□□□□□ -1.5
LINC01828-208	ENST00000626583	TATDN2	Q93075	761 aa		5.65	□□□□□ -1.5
LINC01828-208	ENST00000626583	PLEKHG2	Q9H7P9	1386 aa		5.65	□□□□□ -1.51
LINC01828-208	ENST00000626583	MUC3A	Q02505	3323 aa		5.64	□□□□□ -1.51
LINC01828-208	ENST00000626583	KCNQ4	P56696	695 aa		5.64	□□□□□ -1.51
LINC01828-208	ENST00000626583	ARHGAP27	Q6ZUM4	889 aa		5.64	□□□□□ -1.51
LINC01828-208	ENST00000626583	TCP11L2	Q8N4U5	519 aa		5.64	□□□□□ -1.51
LINC01828-208	ENST00000626583	NBPF15	Q8N660	670 aa		5.64	□□□□□ -1.51
LINC01828-208	ENST00000626583	LY75	O60449	1722 aa		5.64	□□□□□ -1.51
LINC01828-208	ENST00000626583	SBNO1	A3KN83	1393 aa		5.64	□□□□□ -1.51
LINC01828-208	ENST00000626583	CEP290	O15078	2479 aa		5.64	□□□□□ -1.51
LINC01828-208	ENST00000626583	TRPM1	Q7Z4N2	1603 aa		5.63	□□□□□ -1.51
LINC01828-208	ENST00000626583	FAM187A	A6NFU0	413 aa		5.63	□□□□□ -1.51
LINC01828-208	ENST00000626583	SMIM5	Q71RC9	77 aa		5.63	□□□□□ -1.51
LINC01828-208	ENST00000626583	SLF2	Q8IX21	1173 aa		5.63	□□□□□ -1.51
LINC01828-208	ENST00000626583	FAM198A	Q9UFP1	575 aa		5.63	□□□□□ -1.51
LINC01828-208	ENST00000626583	RANBP2	P49792	3224 aa	Known RBP	5.63	□□□□□ -1.51
LINC01828-208	ENST00000626583	ARHGEF10	O15013	1369 aa		5.63	□□□□□ -1.51
LINC01828-208	ENST00000626583	KIAA0232	Q92628	1395 aa		5.63	□□□□□ -1.51
LINC01828-208	ENST00000626583	GTPBP6	O43824	516 aa	Predicted RBP	5.62	□□□□□ -1.51
LINC01828-208	ENST00000626583	SMCP	P49901	116 aa	Predicted RBP	5.62	□□□□□ -1.51
LINC01828-208	ENST00000626583	CTC1	Q2NKJ3	1217 aa		5.62	□□□□□ -1.51
LINC01828-208	ENST00000626583	ZNF697	Q5TEC3	545 aa		5.62	□□□□□ -1.51
LINC01828-208	ENST00000626583	COL23A1	Q86Y22	540 aa	Predicted RBP	5.62	□□□□□ -1.51
LINC01828-208	ENST00000626583	PRDM11	Q9NQV5	511 aa		5.62	□□□□□ -1.51
LINC01828-208	ENST00000626583	BCL9	O00512	1426 aa		5.62	□□□□□ -1.51
LINC01828-208	ENST00000626583	NAIP	Q13075	1403 aa		5.62	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms