RNA–Protein interactions for RNA: ENST00000625410.1

LINC01943-201, Transcript of long intergenic non-protein coding RNA 1943, humanhuman

TSL 2 BASIC

Gene LINC01943, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01943-201ENST00000625410 CCDC30Q5VVM6 783 aa12.54□□□□□ -0.4
LINC01943-201ENST00000625410 NFATC2IPQ8NCF5 419 aa12.54□□□□□ -0.4
LINC01943-201ENST00000625410 CACNA1FO60840 1977 aa12.53□□□□□ -0.4
LINC01943-201ENST00000625410 PROSER3Q2NL68 480 aa12.53□□□□□ -0.4
LINC01943-201ENST00000625410 ZNF790Q6PG37 636 aa12.53□□□□□ -0.4
LINC01943-201ENST00000625410 C1orf115Q9H7X2 142 aa12.53□□□□□ -0.4
LINC01943-201ENST00000625410 PHAXQ9H814 394 aaKnown RBP12.53□□□□□ -0.4
LINC01943-201ENST00000625410 NWD2Q9ULI1 1742 aa12.53□□□□□ -0.4
LINC01943-201ENST00000625410 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.52□□□□□ -0.41
LINC01943-201ENST00000625410 ANXA1P04083 346 aa12.52□□□□□ -0.41
LINC01943-201ENST00000625410 EVA1CP58658 441 aa12.52□□□□□ -0.41
LINC01943-201ENST00000625410 PDIA6Q15084 440 aa12.52□□□□□ -0.41
LINC01943-201ENST00000625410 LRP10Q7Z4F1 713 aa12.52□□□□□ -0.41
LINC01943-201ENST00000625410 UNC5CLQ8IV45 518 aa12.52□□□□□ -0.41
LINC01943-201ENST00000625410 ZNF496Q96IT1 587 aaPredicted RBP12.52□□□□□ -0.41
LINC01943-201ENST00000625410 CHPF2Q9P2E5 772 aa12.52□□□□□ -0.41
LINC01943-201ENST00000625410 ADCY9O60503 1353 aa12.52□□□□□ -0.41
LINC01943-201ENST00000625410 TULP1O00294 542 aaPredicted RBP12.51□□□□□ -0.41
LINC01943-201ENST00000625410 HSP90AB1P08238 724 aaKnown RBP12.51□□□□□ -0.41
LINC01943-201ENST00000625410 SMC5Q8IY18 1101 aa12.51□□□□□ -0.41
LINC01943-201ENST00000625410 MEIS3Q99687 375 aa12.51□□□□□ -0.41
LINC01943-201ENST00000625410 LAMB4A4D0S4 1761 aa12.51□□□□□ -0.41
LINC01943-201ENST00000625410 EIF2S2P20042 333 aaKnown RBP12.5□□□□□ -0.41
LINC01943-201ENST00000625410 STK31Q9BXU1 1019 aa12.5□□□□□ -0.41
LINC01943-201ENST00000625410 PDZRN3Q9UPQ7 1066 aa12.5□□□□□ -0.41
LINC01943-201ENST00000625410 RBM19Q9Y4C8 960 aaKnown RBP12.5□□□□□ -0.41
LINC01943-201ENST00000625410 SPATA31A1Q5TZJ5 1347 aa12.5□□□□□ -0.41
LINC01943-201ENST00000625410 DCAF8L1A6NGE4 600 aa12.49□□□□□ -0.41
LINC01943-201ENST00000625410 ERVV-2B6SEH9 535 aa12.49□□□□□ -0.41
LINC01943-201ENST00000625410 PDE4AP27815 886 aa12.49□□□□□ -0.41
LINC01943-201ENST00000625410 RWDD1Q9H446 243 aaPredicted RBP12.49□□□□□ -0.41
LINC01943-201ENST00000625410 USP35Q9P2H5 1018 aa12.49□□□□□ -0.41
LINC01943-201ENST00000625410 SPATA31A5Q5VU36 1347 aa12.48□□□□□ -0.41
LINC01943-201ENST00000625410 SPATA31A7Q8IWB4 1347 aa12.48□□□□□ -0.41
LINC01943-201ENST00000625410 CABP4P57796 275 aa12.48□□□□□ -0.41
LINC01943-201ENST00000625410 ONECUT3O60422 494 aaPredicted RBP12.47□□□□□ -0.41
LINC01943-201ENST00000625410 CCT4P50991 539 aaKnown RBP12.47□□□□□ -0.41
LINC01943-201ENST00000625410 FKBP5Q13451 457 aaPredicted RBP12.47□□□□□ -0.41
LINC01943-201ENST00000625410 CEP85Q6P2H3 762 aa12.47□□□□□ -0.41
LINC01943-201ENST00000625410 ANKRD44Q8N8A2 993 aa12.47□□□□□ -0.41
LINC01943-201ENST00000625410 DDX54Q8TDD1 881 aaKnown RBP12.47□□□□□ -0.41
LINC01943-201ENST00000625410 CNKSR2Q8WXI2 1034 aa12.47□□□□□ -0.41
LINC01943-201ENST00000625410 USP16Q9Y5T5 823 aa12.47□□□□□ -0.41
LINC01943-201ENST00000625410 ITGB4P16144 1822 aa12.46□□□□□ -0.41
LINC01943-201ENST00000625410 BEND3Q5T5X7 828 aa12.46□□□□□ -0.41
LINC01943-201ENST00000625410 DDX21Q9NR30 783 aaKnown RBP eCLIP12.46□□□□□ -0.41
LINC01943-201ENST00000625410 DBF4Q9UBU7 674 aaPredicted RBP12.46□□□□□ -0.41
LINC01943-201ENST00000625410 HOXD11P31277 338 aaPredicted RBP12.45□□□□□ -0.42
LINC01943-201ENST00000625410 RGS3P49796 1198 aa12.45□□□□□ -0.42
LINC01943-201ENST00000625410 VPS72Q15906 364 aa12.45□□□□□ -0.42
LINC01943-201ENST00000625410 C8orf34Q49A92 452 aa12.45□□□□□ -0.42
LINC01943-201ENST00000625410 FMNL2Q96PY5 1086 aa12.45□□□□□ -0.42
LINC01943-201ENST00000625410 BACH2Q9BYV9 841 aa12.45□□□□□ -0.42
LINC01943-201ENST00000625410 DOT1LQ8TEK3 1739 aa12.45□□□□□ -0.42
LINC01943-201ENST00000625410 BCL9O00512 1426 aa12.45□□□□□ -0.42
LINC01943-201ENST00000625410 NBPF26B4DH59 902 aa12.44□□□□□ -0.42
LINC01943-201ENST00000625410 NUCB1Q02818 461 aa12.44□□□□□ -0.42
LINC01943-201ENST00000625410 NBPF14Q5TI25 921 aa12.44□□□□□ -0.42
LINC01943-201ENST00000625410 NBPF10Q6P3W6 841 aaKnown RBP12.44□□□□□ -0.42
LINC01943-201ENST00000625410 SLC4A10Q6U841 1118 aa12.44□□□□□ -0.42
LINC01943-201ENST00000625410 DEFB132Q7Z7B7 95 aa12.44□□□□□ -0.42
LINC01943-201ENST00000625410 SEPT12Q8IYM1 358 aa12.44□□□□□ -0.42
LINC01943-201ENST00000625410 NBPF15Q8N660 670 aa12.44□□□□□ -0.42
LINC01943-201ENST00000625410 PIGBQ92521 554 aa12.44□□□□□ -0.42
LINC01943-201ENST00000625410 USP44Q9H0E7 712 aa12.44□□□□□ -0.42
LINC01943-201ENST00000625410 CHMP4BQ9H444 224 aaKnown RBP12.44□□□□□ -0.42
LINC01943-201ENST00000625410 BRWD3Q6RI45 1802 aa12.44□□□□□ -0.42
LINC01943-201ENST00000625410 PI4KAP2A4QPH2 592 aa12.43□□□□□ -0.42
LINC01943-201ENST00000625410 SNRPA1P09661 255 aaKnown RBP12.43□□□□□ -0.42
LINC01943-201ENST00000625410 BARGINQ6ZT62 677 aa12.43□□□□□ -0.42
LINC01943-201ENST00000625410 PI4KAP1Q8N8J0 262 aa12.43□□□□□ -0.42
LINC01943-201ENST00000625410 DNAAF4Q8WXU2 420 aa12.43□□□□□ -0.42
LINC01943-201ENST00000625410 SLC4A9Q96Q91 983 aa12.43□□□□□ -0.42
LINC01943-201ENST00000625410 THRAP3Q9Y2W1 955 aaKnown RBP12.43□□□□□ -0.42
LINC01943-201ENST00000625410 THSD7AQ9UPZ6 1657 aa12.42□□□□□ -0.42
LINC01943-201ENST00000625410 PIP4K2AP48426 406 aaPredicted RBP12.42□□□□□ -0.42
LINC01943-201ENST00000625410 MARCH10Q8NA82 808 aaPredicted RBP12.42□□□□□ -0.42
LINC01943-201ENST00000625410 DCTPP1Q9H773 170 aa12.42□□□□□ -0.42
LINC01943-201ENST00000625410 ATG3Q9NT62 314 aa12.42□□□□□ -0.42
LINC01943-201ENST00000625410 HYPKQ9NX55 129 aa12.42□□□□□ -0.42
LINC01943-201ENST00000625410 IBTKQ9P2D0 1353 aaPredicted RBP12.42□□□□□ -0.42
LINC01943-201ENST00000625410 TJP1Q07157 1748 aa12.41□□□□□ -0.42
LINC01943-201ENST00000625410 SF3B2Q13435 895 aaKnown RBP12.41□□□□□ -0.42
LINC01943-201ENST00000625410 NUP188Q5SRE5 1749 aa12.41□□□□□ -0.42
LINC01943-201ENST00000625410 KSR2Q6VAB6 950 aa12.41□□□□□ -0.42
LINC01943-201ENST00000625410 RPAP2Q8IXW5 612 aaPredicted RBP12.41□□□□□ -0.42
LINC01943-201ENST00000625410 TTC5Q8N0Z6 440 aa12.41□□□□□ -0.42
LINC01943-201ENST00000625410 ASAP1Q9ULH1 1129 aa12.41□□□□□ -0.42
LINC01943-201ENST00000625410 MAP3K2Q9Y2U5 619 aa12.41□□□□□ -0.42
LINC01943-201ENST00000625410 IGKV5-2P06315 115 aa12.4□□□□□ -0.42
LINC01943-201ENST00000625410 TPRNQ4KMQ1 711 aa12.4□□□□□ -0.42
LINC01943-201ENST00000625410 KRT27Q7Z3Y8 459 aa12.4□□□□□ -0.42
LINC01943-201ENST00000625410 XAGE3Q8WTP9 111 aa12.4□□□□□ -0.42
LINC01943-201ENST00000625410 CDCA7Q9BWT1 371 aaPredicted RBP12.4□□□□□ -0.42
LINC01943-201ENST00000625410 CHMP4AQ9BY43 222 aa12.4□□□□□ -0.42
LINC01943-201ENST00000625410 ARFGEF2Q9Y6D5 1785 aa12.4□□□□□ -0.42
LINC01943-201ENST00000625410 LRP5O75197 1615 aa12.4□□□□□ -0.42
LINC01943-201ENST00000625410 ERBB4Q15303 1308 aa12.39□□□□□ -0.43
LINC01943-201ENST00000625410 EXOC5O00471 708 aa12.39□□□□□ -0.43
LINC01943-201ENST00000625410 GNAI2P04899 355 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms