RNA–Protein interactions for RNA: ENST00000624166.3

ATRX-214, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 4,272 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-214ENST00000624166 NOC3LQ8WTT2 800 aaKnown RBP13.88□□□□□ -0.19
ATRX-214ENST00000624166 KIF24Q5T7B8 1368 aa13.88□□□□□ -0.19
ATRX-214ENST00000624166 FAM83GA6ND36 823 aa13.88□□□□□ -0.19
ATRX-214ENST00000624166 ZSCAN12O43309 604 aa13.88□□□□□ -0.19
ATRX-214ENST00000624166 TSHZ3Q63HK5 1081 aa13.88□□□□□ -0.19
ATRX-214ENST00000624166 TXNDC2Q86VQ3 553 aa13.88□□□□□ -0.19
ATRX-214ENST00000624166 MIS18AQ9NYP9 233 aa13.88□□□□□ -0.19
ATRX-214ENST00000624166 NEUROD6Q96NK8 337 aa13.87□□□□□ -0.19
ATRX-214ENST00000624166 GNAT3A8MTJ3 354 aa13.87□□□□□ -0.19
ATRX-214ENST00000624166 TUBB4AP04350 444 aa13.87□□□□□ -0.19
ATRX-214ENST00000624166 CHMLP26374 656 aa13.87□□□□□ -0.19
ATRX-214ENST00000624166 ATP8B2P98198 1209 aa13.87□□□□□ -0.19
ATRX-214ENST00000624166 TTC5Q8N0Z6 440 aa13.87□□□□□ -0.19
ATRX-214ENST00000624166 NOL10Q9BSC4 688 aaKnown RBP13.87□□□□□ -0.19
ATRX-214ENST00000624166 DACH1Q9UI36 760 aa13.87□□□□□ -0.19
ATRX-214ENST00000624166 SPG7Q9UQ90 795 aa13.87□□□□□ -0.19
ATRX-214ENST00000624166 EVI5LQ96CN4 794 aa13.86□□□□□ -0.19
ATRX-214ENST00000624166 DNAJC2Q99543 621 aaKnown RBP13.86□□□□□ -0.19
ATRX-214ENST00000624166 ECHDC1Q9NTX5 307 aa13.86□□□□□ -0.19
ATRX-214ENST00000624166 TRMT1Q9NXH9 659 aaKnown RBP13.86□□□□□ -0.19
ATRX-214ENST00000624166 TFIP11Q9UBB9 837 aaKnown RBP13.86□□□□□ -0.19
ATRX-214ENST00000624166 DNM1Q05193 864 aaKnown RBP13.86□□□□□ -0.19
ATRX-214ENST00000624166 TYRO3Q06418 890 aa13.86□□□□□ -0.19
ATRX-214ENST00000624166 AIMP1Q12904 312 aaKnown RBP13.86□□□□□ -0.19
ATRX-214ENST00000624166 ANO6Q4KMQ2 910 aa13.86□□□□□ -0.19
ATRX-214ENST00000624166 FILIP1LQ4L180 1135 aa13.86□□□□□ -0.19
ATRX-214ENST00000624166 ZNF397Q8NF99 534 aaPredicted RBP13.86□□□□□ -0.19
ATRX-214ENST00000624166 POLKQ9UBT6 870 aa13.86□□□□□ -0.19
ATRX-214ENST00000624166 SNW1Q13573 536 aaKnown RBP13.86□□□□□ -0.19
ATRX-214ENST00000624166 SMARCE1Q969G3 411 aa13.86□□□□□ -0.19
ATRX-214ENST00000624166 CLASP1Q7Z460 1538 aa13.85□□□□□ -0.19
ATRX-214ENST00000624166 A0A0G2JS52 829 aa13.85□□□□□ -0.19
ATRX-214ENST00000624166 EPB41L2O43491 1005 aaKnown RBP13.85□□□□□ -0.19
ATRX-214ENST00000624166 LARP6Q9BRS8 491 aaKnown RBP13.85□□□□□ -0.19
ATRX-214ENST00000624166 ERBB4Q15303 1308 aa13.85□□□□□ -0.19
ATRX-214ENST00000624166 NFXL1Q6ZNB6 911 aa13.85□□□□□ -0.19
ATRX-214ENST00000624166 ZSCAN16Q9H4T2 348 aaPredicted RBP13.85□□□□□ -0.19
ATRX-214ENST00000624166 NPHP3Q7Z494 1330 aa13.85□□□□□ -0.19
ATRX-214ENST00000624166 DDX11Q96FC9 970 aa13.85□□□□□ -0.19
ATRX-214ENST00000624166 A0A1W2PP64 1363 aa13.85□□□□□ -0.19
ATRX-214ENST00000624166 GABPB1Q06547 395 aaPredicted RBP13.84□□□□□ -0.19
ATRX-214ENST00000624166 IDI1Q13907 227 aa13.84□□□□□ -0.19
ATRX-214ENST00000624166 CCDC150Q8NCX0 1101 aa13.84□□□□□ -0.19
ATRX-214ENST00000624166 PBRM1Q86U86 1689 aa13.84□□□□□ -0.19
ATRX-214ENST00000624166 SKILP12757 684 aa13.84□□□□□ -0.19
ATRX-214ENST00000624166 SYT1P21579 422 aa13.84□□□□□ -0.19
ATRX-214ENST00000624166 PTGS1P23219 599 aa13.84□□□□□ -0.19
ATRX-214ENST00000624166 RHPN1Q8TCX5 695 aa13.84□□□□□ -0.19
ATRX-214ENST00000624166 GPT2Q8TD30 523 aa13.84□□□□□ -0.19
ATRX-214ENST00000624166 RUFY1Q96T51 708 aa13.84□□□□□ -0.19
ATRX-214ENST00000624166 DACT1Q9NYF0 836 aa13.84□□□□□ -0.19
ATRX-214ENST00000624166 RIOK3O14730 519 aaKnown RBP13.84□□□□□ -0.19
ATRX-214ENST00000624166 URI1O94763 535 aaPredicted RBP13.84□□□□□ -0.19
ATRX-214ENST00000624166 SLU7O95391 586 aaKnown RBP13.84□□□□□ -0.19
ATRX-214ENST00000624166 APPP05067 770 aa13.84□□□□□ -0.19
ATRX-214ENST00000624166 FAM69CQ0P6D2 419 aa13.84□□□□□ -0.19
ATRX-214ENST00000624166 WASHC4Q2M389 1173 aa13.84□□□□□ -0.19
ATRX-214ENST00000624166 PLEKHO1Q53GL0 409 aaPredicted RBP13.84□□□□□ -0.19
ATRX-214ENST00000624166 ZNF330Q9Y3S2 320 aaPredicted RBP13.84□□□□□ -0.19
ATRX-214ENST00000624166 FANCAO15360 1455 aa13.84□□□□□ -0.19
ATRX-214ENST00000624166 ABCC10Q5T3U5 1492 aa13.84□□□□□ -0.19
ATRX-214ENST00000624166 TTC21BQ7Z4L5 1316 aa13.84□□□□□ -0.19
ATRX-214ENST00000624166 HMGB1P09429 215 aaKnown RBP13.84□□□□□ -0.19
ATRX-214ENST00000624166 GSPT1P15170 499 aaKnown RBP13.84□□□□□ -0.19
ATRX-214ENST00000624166 TAF7Q15545 349 aaPredicted RBP13.84□□□□□ -0.19
ATRX-214ENST00000624166 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.84□□□□□ -0.19
ATRX-214ENST00000624166 TARBP1Q13395 1621 aaKnown RBP13.83□□□□□ -0.19
ATRX-214ENST00000624166 ABCC4O15439 1325 aa13.83□□□□□ -0.2
ATRX-214ENST00000624166 HMG20BQ9P0W2 317 aa13.83□□□□□ -0.2
ATRX-214ENST00000624166 WASLO00401 505 aaPredicted RBP13.83□□□□□ -0.2
ATRX-214ENST00000624166 BRPF1P55201 1214 aaPredicted RBP13.83□□□□□ -0.2
ATRX-214ENST00000624166 CFAP100Q494V2 611 aa13.83□□□□□ -0.2
ATRX-214ENST00000624166 PPP1R42Q7Z4L9 355 aa13.83□□□□□ -0.2
ATRX-214ENST00000624166 FAM177A1Q8N128 213 aaPredicted RBP13.83□□□□□ -0.2
ATRX-214ENST00000624166 PHACTR3Q96KR7 559 aa13.83□□□□□ -0.2
ATRX-214ENST00000624166 AK2P54819 239 aa13.83□□□□□ -0.2
ATRX-214ENST00000624166 WAPLQ7Z5K2 1190 aa13.83□□□□□ -0.2
ATRX-214ENST00000624166 PPFIBP1Q86W92 1011 aa13.83□□□□□ -0.2
ATRX-214ENST00000624166 OTUD7AQ8TE49 926 aaPredicted RBP13.83□□□□□ -0.2
ATRX-214ENST00000624166 GBP3Q9H0R5 595 aa13.83□□□□□ -0.2
ATRX-214ENST00000624166 CD2BP2O95400 341 aaKnown RBP13.82□□□□□ -0.2
ATRX-214ENST00000624166 UTP14CQ5TAP6 766 aaKnown RBP13.82□□□□□ -0.2
ATRX-214ENST00000624166 CLEC17AQ6ZS10 378 aa13.82□□□□□ -0.2
ATRX-214ENST00000624166 PIP4K2AP48426 406 aaPredicted RBP13.81□□□□□ -0.2
ATRX-214ENST00000624166 DDX54Q8TDD1 881 aaKnown RBP13.81□□□□□ -0.2
ATRX-214ENST00000624166 DNAAF4Q8WXU2 420 aa13.81□□□□□ -0.2
ATRX-214ENST00000624166 CCDC47Q96A33 483 aaKnown RBP13.81□□□□□ -0.2
ATRX-214ENST00000624166 BCL2L12Q9HB09 334 aa13.81□□□□□ -0.2
ATRX-214ENST00000624166 ZNF518AQ6AHZ1 1483 aa13.81□□□□□ -0.2
ATRX-214ENST00000624166 GOLGA6L9A6NEM1 432 aa13.81□□□□□ -0.2
ATRX-214ENST00000624166 VPS53Q5VIR6 699 aa13.81□□□□□ -0.2
ATRX-214ENST00000624166 PIK3R4Q99570 1358 aa13.81□□□□□ -0.2
ATRX-214ENST00000624166 FSIP1Q8NA03 581 aa13.81□□□□□ -0.2
ATRX-214ENST00000624166 SIL1Q9H173 461 aa13.81□□□□□ -0.2
ATRX-214ENST00000624166 CTNNA3Q9UI47 895 aa13.81□□□□□ -0.2
ATRX-214ENST00000624166 U3KPZ7 1027 aaPredicted RBP13.81□□□□□ -0.2
ATRX-214ENST00000624166 ERVK-7P63135 1459 aa13.81□□□□□ -0.2
ATRX-214ENST00000624166 TTC37Q6PGP7 1564 aa13.81□□□□□ -0.2
ATRX-214ENST00000624166 TRPM1Q7Z4N2 1603 aa13.8□□□□□ -0.2
ATRX-214ENST00000624166 PKP1Q13835 747 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms