RNA–Protein interactions for RNA: ENST00000623529.1

LINC01561-202, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

Gene LINC01561, Length 2,160 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-202ENST00000623529 KDM3BQ7LBC6 1761 aa12.88□□□□□ -0.35
LINC01561-202ENST00000623529 KCNQ2O43526 872 aa12.87□□□□□ -0.35
LINC01561-202ENST00000623529 SLC4A2P04920 1241 aa12.87□□□□□ -0.35
LINC01561-202ENST00000623529 EIF2S2P20042 333 aaKnown RBP12.87□□□□□ -0.35
LINC01561-202ENST00000623529 EXOC6Q8TAG9 804 aa12.87□□□□□ -0.35
LINC01561-202ENST00000623529 PANK1Q8TE04 598 aa12.87□□□□□ -0.35
LINC01561-202ENST00000623529 CLUAP1Q96AJ1 413 aa12.87□□□□□ -0.35
LINC01561-202ENST00000623529 TOGARAM1Q9Y4F4 1720 aa12.87□□□□□ -0.35
LINC01561-202ENST00000623529 G2E3Q7L622 706 aa12.87□□□□□ -0.35
LINC01561-202ENST00000623529 PTF1AQ7RTS3 328 aa12.87□□□□□ -0.35
LINC01561-202ENST00000623529 SEPT12Q8IYM1 358 aa12.87□□□□□ -0.35
LINC01561-202ENST00000623529 TMOD3Q9NYL9 352 aa12.87□□□□□ -0.35
LINC01561-202ENST00000623529 USP16Q9Y5T5 823 aa12.87□□□□□ -0.35
LINC01561-202ENST00000623529 SYTL4Q96C24 671 aaPredicted RBP12.86□□□□□ -0.35
LINC01561-202ENST00000623529 ATG3Q9NT62 314 aa12.86□□□□□ -0.35
LINC01561-202ENST00000623529 EP400Q96L91 3159 aa12.86□□□□□ -0.35
LINC01561-202ENST00000623529 PTCD1O75127 700 aaKnown RBP12.86□□□□□ -0.35
LINC01561-202ENST00000623529 TRIM27P14373 513 aa12.86□□□□□ -0.35
LINC01561-202ENST00000623529 CRBNQ96SW2 442 aa12.86□□□□□ -0.35
LINC01561-202ENST00000623529 TTC5Q8N0Z6 440 aa12.85□□□□□ -0.35
LINC01561-202ENST00000623529 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.85□□□□□ -0.35
LINC01561-202ENST00000623529 CHMP4AQ9BY43 222 aa12.85□□□□□ -0.35
LINC01561-202ENST00000623529 BCL9O00512 1426 aa12.85□□□□□ -0.35
LINC01561-202ENST00000623529 ANXA1P04083 346 aa12.84□□□□□ -0.35
LINC01561-202ENST00000623529 HDGFL1Q5TGJ6 251 aa12.84□□□□□ -0.35
LINC01561-202ENST00000623529 ZKSCAN2Q63HK3 967 aa12.84□□□□□ -0.35
LINC01561-202ENST00000623529 BRD2P25440 801 aaKnown RBP12.84□□□□□ -0.35
LINC01561-202ENST00000623529 PDE3AQ14432 1141 aa12.84□□□□□ -0.35
LINC01561-202ENST00000623529 CCDC30Q5VVM6 783 aa12.84□□□□□ -0.35
LINC01561-202ENST00000623529 ATF7IPQ6VMQ6 1270 aa12.84□□□□□ -0.35
LINC01561-202ENST00000623529 THSD7AQ9UPZ6 1657 aa12.83□□□□□ -0.36
LINC01561-202ENST00000623529 HOXB7P09629 217 aa12.83□□□□□ -0.36
LINC01561-202ENST00000623529 CANXP27824 592 aaKnown RBP12.83□□□□□ -0.36
LINC01561-202ENST00000623529 PDIA6Q15084 440 aa12.83□□□□□ -0.36
LINC01561-202ENST00000623529 PROSER3Q2NL68 480 aa12.83□□□□□ -0.36
LINC01561-202ENST00000623529 FMNL2Q96PY5 1086 aa12.83□□□□□ -0.36
LINC01561-202ENST00000623529 SLC4A9Q96Q91 983 aa12.83□□□□□ -0.36
LINC01561-202ENST00000623529 PHAXQ9H814 394 aaKnown RBP12.83□□□□□ -0.36
LINC01561-202ENST00000623529 COG6Q9Y2V7 657 aa12.83□□□□□ -0.36
LINC01561-202ENST00000623529 ITGB4P16144 1822 aa12.83□□□□□ -0.36
LINC01561-202ENST00000623529 BCL11BQ9C0K0 894 aaPredicted RBP12.83□□□□□ -0.36
LINC01561-202ENST00000623529 CHPF2Q9P2E5 772 aa12.83□□□□□ -0.36
LINC01561-202ENST00000623529 SOS1Q07889 1333 aaPredicted RBP12.82□□□□□ -0.36
LINC01561-202ENST00000623529 SNRPA1P09661 255 aaKnown RBP12.82□□□□□ -0.36
LINC01561-202ENST00000623529 PIP4K2AP48426 406 aaPredicted RBP12.81□□□□□ -0.36
LINC01561-202ENST00000623529 DZIP1LQ8IYY4 767 aaKnown RBP12.81□□□□□ -0.36
LINC01561-202ENST00000623529 ARHGAP45Q92619 1136 aa12.81□□□□□ -0.36
LINC01561-202ENST00000623529 KIF16BQ96L93 1317 aa12.81□□□□□ -0.36
LINC01561-202ENST00000623529 IPO8O15397 1037 aaKnown RBP12.81□□□□□ -0.36
LINC01561-202ENST00000623529 IPO9Q96P70 1041 aaKnown RBP12.8□□□□□ -0.36
LINC01561-202ENST00000623529 STK31Q9BXU1 1019 aa12.8□□□□□ -0.36
LINC01561-202ENST00000623529 KCPQ6ZWJ8 1503 aa12.8□□□□□ -0.36
LINC01561-202ENST00000623529 F6X3S4 739 aa12.8□□□□□ -0.36
LINC01561-202ENST00000623529 TMEM57Q8N5G2 664 aa12.8□□□□□ -0.36
LINC01561-202ENST00000623529 RBM42Q9BTD8 480 aaKnown RBP12.8□□□□□ -0.36
LINC01561-202ENST00000623529 FLIIQ13045 1269 aa12.79□□□□□ -0.36
LINC01561-202ENST00000623529 DOT1LQ8TEK3 1739 aa12.79□□□□□ -0.36
LINC01561-202ENST00000623529 NBPF26B4DH59 902 aa12.79□□□□□ -0.36
LINC01561-202ENST00000623529 A1BGP04217 495 aa12.79□□□□□ -0.36
LINC01561-202ENST00000623529 NBPF14Q5TI25 921 aa12.79□□□□□ -0.36
LINC01561-202ENST00000623529 NBPF10Q6P3W6 841 aaKnown RBP12.79□□□□□ -0.36
LINC01561-202ENST00000623529 LRP10Q7Z4F1 713 aa12.79□□□□□ -0.36
LINC01561-202ENST00000623529 NBPF15Q8N660 670 aa12.79□□□□□ -0.36
LINC01561-202ENST00000623529 DBF4Q9UBU7 674 aaPredicted RBP12.79□□□□□ -0.36
LINC01561-202ENST00000623529 ZBTB47Q9UFB7 747 aaPredicted RBP12.79□□□□□ -0.36
LINC01561-202ENST00000623529 DNAJC10Q8IXB1 793 aa12.78□□□□□ -0.36
LINC01561-202ENST00000623529 C5P01031 1676 aa12.78□□□□□ -0.36
LINC01561-202ENST00000623529 MYL6BP14649 208 aa12.77□□□□□ -0.36
LINC01561-202ENST00000623529 BAG6P46379 1132 aa12.77□□□□□ -0.36
LINC01561-202ENST00000623529 MVPQ14764 893 aaKnown RBP12.77□□□□□ -0.36
LINC01561-202ENST00000623529 B4GALNT3Q6L9W6 998 aa12.77□□□□□ -0.36
LINC01561-202ENST00000623529 KRT27Q7Z3Y8 459 aa12.77□□□□□ -0.36
LINC01561-202ENST00000623529 FTSJ3Q8IY81 847 aaKnown RBP12.77□□□□□ -0.36
LINC01561-202ENST00000623529 DDX21Q9NR30 783 aaKnown RBP eCLIP12.77□□□□□ -0.36
LINC01561-202ENST00000623529 PAPPAQ13219 1627 aa12.77□□□□□ -0.36
LINC01561-202ENST00000623529 UBR2Q8IWV8 1755 aa12.77□□□□□ -0.36
LINC01561-202ENST00000623529 PTPRCP08575 1304 aa12.77□□□□□ -0.37
LINC01561-202ENST00000623529 KCNQ4P56696 695 aa12.76□□□□□ -0.37
LINC01561-202ENST00000623529 FKBP5Q13451 457 aaPredicted RBP12.76□□□□□ -0.37
LINC01561-202ENST00000623529 R3HDM1Q15032 1099 aaKnown RBP12.76□□□□□ -0.37
LINC01561-202ENST00000623529 VSIG10Q8N0Z9 540 aa12.76□□□□□ -0.37
LINC01561-202ENST00000623529 API5Q9BZZ5 524 aaKnown RBP12.76□□□□□ -0.37
LINC01561-202ENST00000623529 ABCC4O15439 1325 aa12.76□□□□□ -0.37
LINC01561-202ENST00000623529 ITPRIPQ8IWB1 547 aa12.76□□□□□ -0.37
LINC01561-202ENST00000623529 BRWD3Q6RI45 1802 aa12.75□□□□□ -0.37
LINC01561-202ENST00000623529 AIMP1Q12904 312 aaKnown RBP12.75□□□□□ -0.37
LINC01561-202ENST00000623529 LOC102724428A0A0B4J2F2 783 aa12.74□□□□□ -0.37
LINC01561-202ENST00000623529 PI4KAP2A4QPH2 592 aa12.74□□□□□ -0.37
LINC01561-202ENST00000623529 ZBTB7BO15156 539 aaPredicted RBP12.74□□□□□ -0.37
LINC01561-202ENST00000623529 CYP19A1P11511 503 aaPredicted RBP12.74□□□□□ -0.37
LINC01561-202ENST00000623529 SIK1P57059 783 aa12.74□□□□□ -0.37
LINC01561-202ENST00000623529 ITPK1Q13572 414 aa12.74□□□□□ -0.37
LINC01561-202ENST00000623529 SLC4A10Q6U841 1118 aa12.74□□□□□ -0.37
LINC01561-202ENST00000623529 COPS6Q7L5N1 327 aa12.74□□□□□ -0.37
LINC01561-202ENST00000623529 PI4KAP1Q8N8J0 262 aa12.74□□□□□ -0.37
LINC01561-202ENST00000623529 HYPKQ9NX55 129 aa12.74□□□□□ -0.37
LINC01561-202ENST00000623529 DCAF8L1A6NGE4 600 aa12.74□□□□□ -0.37
LINC01561-202ENST00000623529 MS4A1P11836 297 aa12.74□□□□□ -0.37
LINC01561-202ENST00000623529 INTS3Q68E01 1043 aaKnown RBP12.74□□□□□ -0.37
LINC01561-202ENST00000623529 ATP6V1AP38606 617 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms