RNA–Protein interactions for RNA: ENST00000623318.1

ERCC6-211, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 2

Gene ERCC6, Length 546 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-211ENST00000623318 CHMP7Q8WUX9 453 aaPredicted RBP8.42□□□□□ -1.06
ERCC6-211ENST00000623318 PURBQ96QR8 312 aaKnown RBP8.42□□□□□ -1.06
ERCC6-211ENST00000623318 INSM2Q96T92 566 aaPredicted RBP8.42□□□□□ -1.06
ERCC6-211ENST00000623318 CCDC9Q9Y3X0 531 aaKnown RBP8.42□□□□□ -1.06
ERCC6-211ENST00000623318 USP3Q9Y6I4 520 aa8.42□□□□□ -1.06
ERCC6-211ENST00000623318 BMP2P12643 396 aa8.41□□□□□ -1.06
ERCC6-211ENST00000623318 SERPINB4P48594 390 aa8.41□□□□□ -1.06
ERCC6-211ENST00000623318 SLC27A3Q5K4L6 730 aa8.41□□□□□ -1.06
ERCC6-211ENST00000623318 TBCELQ5QJ74 424 aa8.41□□□□□ -1.06
ERCC6-211ENST00000623318 TMEM214Q6NUQ4 689 aaKnown RBP8.41□□□□□ -1.06
ERCC6-211ENST00000623318 MKNK1Q9BUB5 465 aa8.41□□□□□ -1.06
ERCC6-211ENST00000623318 NIFKQ9BYG3 293 aaKnown RBP8.41□□□□□ -1.06
ERCC6-211ENST00000623318 SERTM1A2A2V5 107 aa8.4□□□□□ -1.06
ERCC6-211ENST00000623318 SOWAHDA6NJG2 315 aa8.4□□□□□ -1.06
ERCC6-211ENST00000623318 EML1O00423 815 aa8.4□□□□□ -1.06
ERCC6-211ENST00000623318 NOS2P35228 1153 aa8.4□□□□□ -1.06
ERCC6-211ENST00000623318 SCARF1Q14162 830 aa8.4□□□□□ -1.06
ERCC6-211ENST00000623318 GNASQ5JWF2 1037 aa8.4□□□□□ -1.06
ERCC6-211ENST00000623318 POLMQ9NP87 494 aaPredicted RBP8.4□□□□□ -1.06
ERCC6-211ENST00000623318 CABP1Q9NZU7 370 aa8.4□□□□□ -1.06
ERCC6-211ENST00000623318 SEPT3Q9UH03 358 aa8.4□□□□□ -1.06
ERCC6-211ENST00000623318 SPATA31C2B4DYI2 1134 aa8.39□□□□□ -1.07
ERCC6-211ENST00000623318 CTSOP43234 321 aaPredicted RBP8.39□□□□□ -1.07
ERCC6-211ENST00000623318 SF3B2Q13435 895 aaKnown RBP8.39□□□□□ -1.07
ERCC6-211ENST00000623318 FOXD4L5Q5VV16 416 aaPredicted RBP8.39□□□□□ -1.07
ERCC6-211ENST00000623318 CAPN12Q6ZSI9 719 aa8.39□□□□□ -1.07
ERCC6-211ENST00000623318 GTF3C2Q8WUA4 911 aaPredicted RBP8.39□□□□□ -1.07
ERCC6-211ENST00000623318 L3MBTL2Q969R5 705 aa8.39□□□□□ -1.07
ERCC6-211ENST00000623318 AXIN1O15169 862 aa8.38□□□□□ -1.07
ERCC6-211ENST00000623318 WDR44Q5JSH3 913 aa8.38□□□□□ -1.07
ERCC6-211ENST00000623318 C6orf118Q5T5N4 469 aa8.38□□□□□ -1.07
ERCC6-211ENST00000623318 ZDHHC1Q8WTX9 485 aa8.38□□□□□ -1.07
ERCC6-211ENST00000623318 MYO19Q96H55 970 aa8.38□□□□□ -1.07
ERCC6-211ENST00000623318 ICMTO60725 284 aa8.37□□□□□ -1.07
ERCC6-211ENST00000623318 ABL1P00519 1130 aa8.37□□□□□ -1.07
ERCC6-211ENST00000623318 FKBP4Q02790 459 aaKnown RBP eCLIP8.37□□□□□ -1.07
ERCC6-211ENST00000623318 C16orf46Q6P387 395 aa8.37□□□□□ -1.07
ERCC6-211ENST00000623318 TRIM46Q7Z4K8 759 aa8.37□□□□□ -1.07
ERCC6-211ENST00000623318 RNF217Q8TC41 542 aa8.37□□□□□ -1.07
ERCC6-211ENST00000623318 HELQQ8TDG4 1101 aa8.37□□□□□ -1.07
ERCC6-211ENST00000623318 ZNF232Q9UNY5 417 aa8.37□□□□□ -1.07
ERCC6-211ENST00000623318 TTLL8A6PVC2 850 aa8.36□□□□□ -1.07
ERCC6-211ENST00000623318 NAA30Q147X3 362 aaPredicted RBP8.36□□□□□ -1.07
ERCC6-211ENST00000623318 CCDC27Q2M243 656 aa8.36□□□□□ -1.07
ERCC6-211ENST00000623318 C4orf17Q53FE4 359 aa8.36□□□□□ -1.07
ERCC6-211ENST00000623318 C1orf53Q5VUE5 145 aa8.36□□□□□ -1.07
ERCC6-211ENST00000623318 DNMT3AQ9Y6K1 912 aaPredicted RBP8.36□□□□□ -1.07
ERCC6-211ENST00000623318 SOS2Q07890 1332 aaPredicted RBP8.35□□□□□ -1.07
ERCC6-211ENST00000623318 BMP1P13497 986 aa8.35□□□□□ -1.07
ERCC6-211ENST00000623318 MFAP1P55081 439 aaKnown RBP8.35□□□□□ -1.07
ERCC6-211ENST00000623318 LYSMD3Q7Z3D4 306 aa8.35□□□□□ -1.07
ERCC6-211ENST00000623318 QTRT2Q9H974 415 aaKnown RBP8.35□□□□□ -1.07
ERCC6-211ENST00000623318 NPR3P17342 541 aa8.34□□□□□ -1.07
ERCC6-211ENST00000623318 ZNF211Q13398 564 aaPredicted RBP8.34□□□□□ -1.07
ERCC6-211ENST00000623318 RTN1Q16799 776 aa8.34□□□□□ -1.07
ERCC6-211ENST00000623318 COX20Q5RI15 118 aa8.34□□□□□ -1.07
ERCC6-211ENST00000623318 SH3PXD2AQ5TCZ1 1133 aa8.34□□□□□ -1.07
ERCC6-211ENST00000623318 GLYCTKQ8IVS8 523 aa8.34□□□□□ -1.07
ERCC6-211ENST00000623318 ALDH16A1Q8IZ83 802 aa8.34□□□□□ -1.07
ERCC6-211ENST00000623318 ZFP42Q96MM3 310 aa8.34□□□□□ -1.07
ERCC6-211ENST00000623318 ZDHHC3Q9NYG2 299 aa8.34□□□□□ -1.07
ERCC6-211ENST00000623318 H3BRB1 525 aa8.33□□□□□ -1.08
ERCC6-211ENST00000623318 PLA2G4AP47712 749 aa8.33□□□□□ -1.08
ERCC6-211ENST00000623318 NBPF1Q3BBV0 1214 aa8.33□□□□□ -1.08
ERCC6-211ENST00000623318 NBPF10Q6P3W6 841 aaKnown RBP8.33□□□□□ -1.08
ERCC6-211ENST00000623318 PRICKLE2Q7Z3G6 844 aa8.33□□□□□ -1.08
ERCC6-211ENST00000623318 PHACTR1Q9C0D0 580 aa8.33□□□□□ -1.08
ERCC6-211ENST00000623318 SAP130Q9H0E3 1048 aa8.33□□□□□ -1.08
ERCC6-211ENST00000623318 TUT1Q9H6E5 874 aaKnown RBP8.33□□□□□ -1.08
ERCC6-211ENST00000623318 AAASQ9NRG9 546 aa8.33□□□□□ -1.08
ERCC6-211ENST00000623318 HCN4Q9Y3Q4 1203 aa8.33□□□□□ -1.08
ERCC6-211ENST00000623318 GPC6Q9Y625 555 aaPredicted RBP8.33□□□□□ -1.08
ERCC6-211ENST00000623318 PARP3Q9Y6F1 533 aa8.33□□□□□ -1.08
ERCC6-211ENST00000623318 FAM13AO94988 1023 aa8.32□□□□□ -1.08
ERCC6-211ENST00000623318 POU4F2Q12837 409 aa8.32□□□□□ -1.08
ERCC6-211ENST00000623318 ANO2Q9NQ90 1003 aa8.32□□□□□ -1.08
ERCC6-211ENST00000623318 STIM2Q9P246 746 aa8.32□□□□□ -1.08
ERCC6-211ENST00000623318 ECM1Q16610 540 aa8.31□□□□□ -1.08
ERCC6-211ENST00000623318 C11orf91Q3C1V1 193 aa8.31□□□□□ -1.08
ERCC6-211ENST00000623318 NGLY1Q96IV0 654 aa8.31□□□□□ -1.08
ERCC6-211ENST00000623318 ATP13A2Q9NQ11 1180 aa8.31□□□□□ -1.08
ERCC6-211ENST00000623318 BIN2Q9UBW5 565 aaPredicted RBP8.31□□□□□ -1.08
ERCC6-211ENST00000623318 LRFN2Q9ULH4 789 aa8.31□□□□□ -1.08
ERCC6-211ENST00000623318 A0A1B0GTH6 734 aa8.3□□□□□ -1.08
ERCC6-211ENST00000623318 TNFRSF10BO14763 440 aa8.3□□□□□ -1.08
ERCC6-211ENST00000623318 TATP17735 454 aaPredicted RBP8.3□□□□□ -1.08
ERCC6-211ENST00000623318 BRD2P25440 801 aaKnown RBP8.3□□□□□ -1.08
ERCC6-211ENST00000623318 TXLNAP40222 546 aa8.3□□□□□ -1.08
ERCC6-211ENST00000623318 MTMR3Q13615 1198 aa8.3□□□□□ -1.08
ERCC6-211ENST00000623318 HIF1AQ16665 826 aa8.3□□□□□ -1.08
ERCC6-211ENST00000623318 C7orf43Q8WVR3 580 aa8.3□□□□□ -1.08
ERCC6-211ENST00000623318 AIDAQ96BJ3 306 aa8.3□□□□□ -1.08
ERCC6-211ENST00000623318 IRX2Q9BZI1 471 aaPredicted RBP8.3□□□□□ -1.08
ERCC6-211ENST00000623318 PHKA2P46019 1235 aa8.29□□□□□ -1.08
ERCC6-211ENST00000623318 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.29□□□□□ -1.08
ERCC6-211ENST00000623318 ALKBH2Q6NS38 261 aa8.29□□□□□ -1.08
ERCC6-211ENST00000623318 ABTB2Q8N961 1025 aa8.29□□□□□ -1.08
ERCC6-211ENST00000623318 TIMMDC1Q9NPL8 285 aa8.29□□□□□ -1.08
ERCC6-211ENST00000623318 FIGNL2A6NMB9 653 aa8.28□□□□□ -1.08
ERCC6-211ENST00000623318 ST8SIA5O15466 376 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms