RNA–Protein interactions for RNA: ENST00000622875.4

EBF1-211, Transcript of early B cell factor 1, humanhuman

TSL 5 BASIC

Gene EBF1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-211ENST00000622875 NUTM2GQ5VZR2 741 aa7.5□□□□□ -1.21
EBF1-211ENST00000622875 ABT1Q9ULW3 272 aaKnown RBP7.5□□□□□ -1.21
EBF1-211ENST00000622875 DEKP35659 375 aaKnown RBP7.5□□□□□ -1.21
EBF1-211ENST00000622875 CYP4F22Q6NT55 531 aa7.5□□□□□ -1.21
EBF1-211ENST00000622875 DDX21Q9NR30 783 aaKnown RBP eCLIP7.5□□□□□ -1.21
EBF1-211ENST00000622875 NLGN1Q8N2Q7 840 aa7.5□□□□□ -1.21
EBF1-211ENST00000622875 AK7Q96M32 723 aa7.5□□□□□ -1.21
EBF1-211ENST00000622875 NEFMP07197 916 aa7.49□□□□□ -1.21
EBF1-211ENST00000622875 ACEP12821 1306 aa7.49□□□□□ -1.21
EBF1-211ENST00000622875 PRIM1P49642 420 aaKnown RBP7.49□□□□□ -1.21
EBF1-211ENST00000622875 NFKBIEO00221 500 aa7.48□□□□□ -1.21
EBF1-211ENST00000622875 AOC2O75106 756 aa7.48□□□□□ -1.21
EBF1-211ENST00000622875 ARID3AQ99856 593 aa7.48□□□□□ -1.21
EBF1-211ENST00000622875 CNTROBQ8N137 903 aa7.48□□□□□ -1.21
EBF1-211ENST00000622875 PALLDQ8WX93 1383 aa7.48□□□□□ -1.21
EBF1-211ENST00000622875 DIEXFQ68CQ4 756 aaKnown RBP7.47□□□□□ -1.21
EBF1-211ENST00000622875 PNMA8AQ86V59 439 aaPredicted RBP7.47□□□□□ -1.21
EBF1-211ENST00000622875 NUDT16Q96DE0 195 aaKnown RBP7.47□□□□□ -1.21
EBF1-211ENST00000622875 ANKRD13DQ6ZTN6 518 aa7.47□□□□□ -1.21
EBF1-211ENST00000622875 FMR1Q06787 632 aaKnown RBP eCLIP7.47□□□□□ -1.21
EBF1-211ENST00000622875 NOM1Q5C9Z4 860 aaKnown RBP7.46□□□□□ -1.21
EBF1-211ENST00000622875 LAS1LQ9Y4W2 734 aaKnown RBP7.46□□□□□ -1.21
EBF1-211ENST00000622875 CANXP27824 592 aaKnown RBP7.46□□□□□ -1.22
EBF1-211ENST00000622875 AKAP4Q5JQC9 854 aa7.46□□□□□ -1.22
EBF1-211ENST00000622875 KANK4Q5T7N3 995 aaPredicted RBP7.46□□□□□ -1.22
EBF1-211ENST00000622875 KCNH5Q8NCM2 988 aa7.46□□□□□ -1.22
EBF1-211ENST00000622875 ADRA2BP18089 450 aa7.45□□□□□ -1.22
EBF1-211ENST00000622875 IGSF5Q9NSI5 407 aa7.45□□□□□ -1.22
EBF1-211ENST00000622875 INTS3Q68E01 1043 aaKnown RBP7.45□□□□□ -1.22
EBF1-211ENST00000622875 PPEF1O14829 653 aaPredicted RBP7.45□□□□□ -1.22
EBF1-211ENST00000622875 FGD1P98174 961 aa7.45□□□□□ -1.22
EBF1-211ENST00000622875 NOGQ13253 232 aa7.45□□□□□ -1.22
EBF1-211ENST00000622875 TMF1P82094 1093 aa7.44□□□□□ -1.22
EBF1-211ENST00000622875 CST9Q5W186 159 aa7.44□□□□□ -1.22
EBF1-211ENST00000622875 FBXO46Q6PJ61 603 aaPredicted RBP7.44□□□□□ -1.22
EBF1-211ENST00000622875 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.44□□□□□ -1.22
EBF1-211ENST00000622875 PARP3Q9Y6F1 533 aa7.44□□□□□ -1.22
EBF1-211ENST00000622875 CLSTN1O94985 981 aa7.44□□□□□ -1.22
EBF1-211ENST00000622875 CSB-PGBD3P0DP91 1061 aa7.44□□□□□ -1.22
EBF1-211ENST00000622875 CIAPIN1Q6FI81 312 aa7.44□□□□□ -1.22
EBF1-211ENST00000622875 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.44□□□□□ -1.22
EBF1-211ENST00000622875 SMARCC1Q92922 1105 aaPredicted RBP7.44□□□□□ -1.22
EBF1-211ENST00000622875 POGKQ9P215 609 aa7.44□□□□□ -1.22
EBF1-211ENST00000622875 LAMB1P07942 1786 aa7.43□□□□□ -1.22
EBF1-211ENST00000622875 SAPCD2Q86UD0 394 aa7.43□□□□□ -1.22
EBF1-211ENST00000622875 COL11A2P13942 1736 aaPredicted RBP7.43□□□□□ -1.22
EBF1-211ENST00000622875 SMIM5Q71RC9 77 aa7.43□□□□□ -1.22
EBF1-211ENST00000622875 KDM3BQ7LBC6 1761 aa7.43□□□□□ -1.22
EBF1-211ENST00000622875 ANKRD31Q8N7Z5 1873 aa7.43□□□□□ -1.22
EBF1-211ENST00000622875 HSP90AA1P07900 732 aaKnown RBP7.43□□□□□ -1.22
EBF1-211ENST00000622875 HACL1Q9UJ83 578 aa7.43□□□□□ -1.22
EBF1-211ENST00000622875 DDNO94850 711 aaPredicted RBP7.43□□□□□ -1.22
EBF1-211ENST00000622875 NBPF1Q3BBV0 1214 aa7.43□□□□□ -1.22
EBF1-211ENST00000622875 CHMP4AQ9BY43 222 aa7.43□□□□□ -1.22
EBF1-211ENST00000622875 CCDC61Q9Y6R9 512 aa7.43□□□□□ -1.22
EBF1-211ENST00000622875 USP31Q70CQ4 1352 aa7.42□□□□□ -1.22
EBF1-211ENST00000622875 REM2Q8IYK8 340 aaPredicted RBP7.42□□□□□ -1.22
EBF1-211ENST00000622875 RBM27Q9P2N5 1060 aaKnown RBP7.42□□□□□ -1.22
EBF1-211ENST00000622875 GYS1P13807 737 aa7.41□□□□□ -1.22
EBF1-211ENST00000622875 EPHX2P34913 555 aa7.41□□□□□ -1.22
EBF1-211ENST00000622875 COL6A3P12111 3177 aa7.41□□□□□ -1.22
EBF1-211ENST00000622875 MON2Q7Z3U7 1717 aa7.41□□□□□ -1.22
EBF1-211ENST00000622875 HSP90AA2PQ14568 343 aaPredicted RBP7.41□□□□□ -1.22
EBF1-211ENST00000622875 ERFEQ4G0M1 354 aa7.41□□□□□ -1.22
EBF1-211ENST00000622875 PHF14O94880 888 aa7.41□□□□□ -1.22
EBF1-211ENST00000622875 LINC00116Q8NCU8 138 aa7.41□□□□□ -1.22
EBF1-211ENST00000622875 PSMD1Q99460 953 aa7.41□□□□□ -1.22
EBF1-211ENST00000622875 SZT2Q5T011 3432 aa7.4□□□□□ -1.22
EBF1-211ENST00000622875 RGPD2P0DJD1 1756 aa7.4□□□□□ -1.22
EBF1-211ENST00000622875 MAP3K19Q56UN5 1328 aa7.4□□□□□ -1.22
EBF1-211ENST00000622875 APPP05067 770 aa7.4□□□□□ -1.22
EBF1-211ENST00000622875 CACNA1AO00555 2505 aa7.4□□□□□ -1.23
EBF1-211ENST00000622875 H0YGN5 161 aa7.4□□□□□ -1.23
EBF1-211ENST00000622875 MAP1SQ66K74 1059 aaPredicted RBP7.4□□□□□ -1.23
EBF1-211ENST00000622875 RNF186Q9NXI6 227 aa7.4□□□□□ -1.23
EBF1-211ENST00000622875 ZNF646O15015 1829 aaPredicted RBP7.39□□□□□ -1.23
EBF1-211ENST00000622875 CCDC136Q96JN2 1154 aa7.39□□□□□ -1.23
EBF1-211ENST00000622875 KDRP35968 1356 aa7.39□□□□□ -1.23
EBF1-211ENST00000622875 CHRNA5P30532 468 aa7.39□□□□□ -1.23
EBF1-211ENST00000622875 FAM155AB1AL88 458 aaPredicted RBP7.38□□□□□ -1.23
EBF1-211ENST00000622875 SAFB2Q14151 953 aaKnown RBP eCLIP7.38□□□□□ -1.23
EBF1-211ENST00000622875 PAXIP1Q6ZW49 1069 aaPredicted RBP7.38□□□□□ -1.23
EBF1-211ENST00000622875 NLRP6P59044 892 aa7.38□□□□□ -1.23
EBF1-211ENST00000622875 RC3H1Q5TC82 1133 aaKnown RBP7.38□□□□□ -1.23
EBF1-211ENST00000622875 TTLL6Q8N841 843 aa7.38□□□□□ -1.23
EBF1-211ENST00000622875 SYTL4Q96C24 671 aaPredicted RBP7.38□□□□□ -1.23
EBF1-211ENST00000622875 CGNL1Q0VF96 1302 aa7.38□□□□□ -1.23
EBF1-211ENST00000622875 CHRDL2Q6WN34 429 aa7.38□□□□□ -1.23
EBF1-211ENST00000622875 SYMPKQ92797 1274 aaKnown RBP7.38□□□□□ -1.23
EBF1-211ENST00000622875 CABP2Q9NPB3 220 aa7.38□□□□□ -1.23
EBF1-211ENST00000622875 CACNA1SQ13698 1873 aa7.38□□□□□ -1.23
EBF1-211ENST00000622875 ZBTB7CA1YPR0 619 aa7.38□□□□□ -1.23
EBF1-211ENST00000622875 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.38□□□□□ -1.23
EBF1-211ENST00000622875 CD163L1Q9NR16 1453 aa7.37□□□□□ -1.23
EBF1-211ENST00000622875 TRIOBPQ9H2D6 2365 aa7.37□□□□□ -1.23
EBF1-211ENST00000622875 MYH14Q7Z406 1995 aaKnown RBP7.37□□□□□ -1.23
EBF1-211ENST00000622875 POTEFA5A3E0 1075 aa7.37□□□□□ -1.23
EBF1-211ENST00000622875 PDZRN3Q9UPQ7 1066 aa7.37□□□□□ -1.23
EBF1-211ENST00000622875 SPTBN5Q9NRC6 3674 aaKnown RBP7.37□□□□□ -1.23
EBF1-211ENST00000622875 ANKRD26Q9UPS8 1709 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms