RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 MAP3K5Q99683 1374 aa15.89■□□□□ 0.14
SKP2-209ENST00000620197 APBB1O00213 710 aa15.89■□□□□ 0.13
SKP2-209ENST00000620197 KCNB2Q92953 911 aa15.89■□□□□ 0.13
SKP2-209ENST00000620197 RAD50Q92878 1312 aa15.89■□□□□ 0.13
SKP2-209ENST00000620197 CCDC39Q9UFE4 941 aa15.89■□□□□ 0.13
SKP2-209ENST00000620197 NCAPD2Q15021 1401 aa15.89■□□□□ 0.13
SKP2-209ENST00000620197 CCDC30Q5VVM6 783 aa15.88■□□□□ 0.13
SKP2-209ENST00000620197 LTKP29376 864 aa15.88■□□□□ 0.13
SKP2-209ENST00000620197 LSG1Q9H089 658 aaKnown RBP15.88■□□□□ 0.13
SKP2-209ENST00000620197 MRC1P22897 1456 aa15.87■□□□□ 0.13
SKP2-209ENST00000620197 MCCP23508 829 aa15.87■□□□□ 0.13
SKP2-209ENST00000620197 IL17REQ8NFR9 667 aa15.87■□□□□ 0.13
SKP2-209ENST00000620197 FUCA2Q9BTY2 467 aa15.87■□□□□ 0.13
SKP2-209ENST00000620197 SGSM2O43147 1006 aa15.86■□□□□ 0.13
SKP2-209ENST00000620197 RAB11FIP3O75154 756 aa15.86■□□□□ 0.13
SKP2-209ENST00000620197 GADD45BO75293 160 aaPredicted RBP15.86■□□□□ 0.13
SKP2-209ENST00000620197 LRRFIP2Q9Y608 721 aaKnown RBP15.86■□□□□ 0.13
SKP2-209ENST00000620197 NCLP19338 710 aaKnown RBP15.86■□□□□ 0.13
SKP2-209ENST00000620197 SLC4A10Q6U841 1118 aa15.86■□□□□ 0.13
SKP2-209ENST00000620197 MYH15Q9Y2K3 1946 aa15.86■□□□□ 0.13
SKP2-209ENST00000620197 CSPP1Q1MSJ5 1256 aa15.86■□□□□ 0.13
SKP2-209ENST00000620197 UVSSAQ2YD98 709 aa15.86■□□□□ 0.13
SKP2-209ENST00000620197 TSPY26PQ9H489 355 aa15.86■□□□□ 0.13
SKP2-209ENST00000620197 WDR33Q9C0J8 1336 aaKnown RBP15.85■□□□□ 0.13
SKP2-209ENST00000620197 GNAT3A8MTJ3 354 aa15.85■□□□□ 0.13
SKP2-209ENST00000620197 USP48Q86UV5 1035 aa15.85■□□□□ 0.13
SKP2-209ENST00000620197 XPCQ01831 940 aaPredicted RBP15.85■□□□□ 0.13
SKP2-209ENST00000620197 RTF1Q92541 710 aaKnown RBP15.85■□□□□ 0.13
SKP2-209ENST00000620197 SNX14Q9Y5W7 946 aa15.85■□□□□ 0.13
SKP2-209ENST00000620197 STK31Q9BXU1 1019 aa15.84■□□□□ 0.13
SKP2-209ENST00000620197 ANO2Q9NQ90 1003 aa15.84■□□□□ 0.13
SKP2-209ENST00000620197 OVOS2A0A0G2JMS6 1433 aa15.84■□□□□ 0.13
SKP2-209ENST00000620197 FAM184AQ8NB25 1140 aa15.83■□□□□ 0.13
SKP2-209ENST00000620197 HOXC9P31274 260 aa15.83■□□□□ 0.12
SKP2-209ENST00000620197 MTX1Q13505 466 aa15.83■□□□□ 0.12
SKP2-209ENST00000620197 RUFY3Q7L099 469 aa15.83■□□□□ 0.12
SKP2-209ENST00000620197 SNRKQ9NRH2 765 aa15.83■□□□□ 0.12
SKP2-209ENST00000620197 DYNC1I1O14576 645 aa15.82■□□□□ 0.12
SKP2-209ENST00000620197 FKBP5Q13451 457 aaPredicted RBP15.82■□□□□ 0.12
SKP2-209ENST00000620197 JCADQ9P266 1359 aa15.82■□□□□ 0.12
SKP2-209ENST00000620197 HEG1Q9ULI3 1381 aa15.82■□□□□ 0.12
SKP2-209ENST00000620197 HOXB7P09629 217 aa15.81■□□□□ 0.12
SKP2-209ENST00000620197 SYAP1Q96A49 352 aaPredicted RBP15.81■□□□□ 0.12
SKP2-209ENST00000620197 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.81■□□□□ 0.12
SKP2-209ENST00000620197 GTF2F1P35269 517 aaKnown RBP eCLIP15.81■□□□□ 0.12
SKP2-209ENST00000620197 RASEFQ8IZ41 740 aa15.81■□□□□ 0.12
SKP2-209ENST00000620197 SPTLC3Q9NUV7 552 aa15.81■□□□□ 0.12
SKP2-209ENST00000620197 ADCY9O60503 1353 aa15.81■□□□□ 0.12
SKP2-209ENST00000620197 TAF7Q15545 349 aaPredicted RBP15.81■□□□□ 0.12
SKP2-209ENST00000620197 UPF3BQ9BZI7 483 aaKnown RBP15.81■□□□□ 0.12
SKP2-209ENST00000620197 PHF14O94880 888 aa15.8■□□□□ 0.12
SKP2-209ENST00000620197 ZSCAN22P10073 491 aaPredicted RBP15.8■□□□□ 0.12
SKP2-209ENST00000620197 ST3GAL1Q11201 340 aa15.8■□□□□ 0.12
SKP2-209ENST00000620197 BEND3Q5T5X7 828 aa15.8■□□□□ 0.12
SKP2-209ENST00000620197 SASS6Q6UVJ0 657 aa15.8■□□□□ 0.12
SKP2-209ENST00000620197 RHPN1Q8TCX5 695 aa15.8■□□□□ 0.12
SKP2-209ENST00000620197 MAP7D2Q96T17 732 aa15.8■□□□□ 0.12
SKP2-209ENST00000620197 R3HCC1Q9Y3T6 440 aaKnown RBP15.8■□□□□ 0.12
SKP2-209ENST00000620197 RBM10P98175 930 aaKnown RBP15.8■□□□□ 0.12
SKP2-209ENST00000620197 CCDC183Q5T5S1 534 aa15.8■□□□□ 0.12
SKP2-209ENST00000620197 RILPL2Q969X0 211 aa15.8■□□□□ 0.12
SKP2-209ENST00000620197 HYPKQ9NX55 129 aa15.8■□□□□ 0.12
SKP2-209ENST00000620197 ADGRL3Q9HAR2 1447 aa15.8■□□□□ 0.12
SKP2-209ENST00000620197 TTC41PQ6P2S7 1318 aa15.79■□□□□ 0.12
SKP2-209ENST00000620197 PPP1R42Q7Z4L9 355 aa15.79■□□□□ 0.12
SKP2-209ENST00000620197 TBX22Q9Y458 520 aa15.79■□□□□ 0.12
SKP2-209ENST00000620197 C5P01031 1676 aa15.79■□□□□ 0.12
SKP2-209ENST00000620197 AK2P54819 239 aa15.79■□□□□ 0.12
SKP2-209ENST00000620197 FER1L4A9Z1Z3 1794 aa15.78■□□□□ 0.12
SKP2-209ENST00000620197 UBTFL1P0CB47 393 aaPredicted RBP15.78■□□□□ 0.12
SKP2-209ENST00000620197 PIBF1Q8WXW3 757 aa15.78■□□□□ 0.12
SKP2-209ENST00000620197 PHAXQ9H814 394 aaKnown RBP15.78■□□□□ 0.12
SKP2-209ENST00000620197 TRIM6-TRIM34B2RNG4 842 aa15.78■□□□□ 0.12
SKP2-209ENST00000620197 UBE2HP62256 183 aa15.78■□□□□ 0.12
SKP2-209ENST00000620197 FOXD4L5Q5VV16 416 aaPredicted RBP15.78■□□□□ 0.12
SKP2-209ENST00000620197 FOXD4L4Q8WXT5 416 aaPredicted RBP15.78■□□□□ 0.12
SKP2-209ENST00000620197 TM6SF1Q9BZW5 370 aa15.78■□□□□ 0.12
SKP2-209ENST00000620197 UQCRHLA0A096LP55 91 aa15.78■□□□□ 0.12
SKP2-209ENST00000620197 LETM1O95202 739 aaPredicted RBP15.78■□□□□ 0.12
SKP2-209ENST00000620197 UQCRHP07919 91 aa15.78■□□□□ 0.12
SKP2-209ENST00000620197 SYT1P21579 422 aa15.78■□□□□ 0.12
SKP2-209ENST00000620197 PRDM4Q9UKN5 801 aa15.78■□□□□ 0.12
SKP2-209ENST00000620197 NUTM1Q86Y26 1132 aa15.77■□□□□ 0.12
SKP2-209ENST00000620197 KIF1BPQ96EK5 621 aa15.77■□□□□ 0.12
SKP2-209ENST00000620197 LIMCH1Q9UPQ0 1083 aa15.77■□□□□ 0.12
SKP2-209ENST00000620197 EIF4A1P60842 406 aaKnown RBP15.77■□□□□ 0.11
SKP2-209ENST00000620197 CNPY2Q9Y2B0 182 aa15.77■□□□□ 0.11
SKP2-209ENST00000620197 F13A1P00488 732 aa15.76■□□□□ 0.11
SKP2-209ENST00000620197 MLECQ14165 292 aa15.76■□□□□ 0.11
SKP2-209ENST00000620197 GDPD2Q9HCC8 539 aa15.76■□□□□ 0.11
SKP2-209ENST00000620197 SLIT3O75094 1523 aa15.76■□□□□ 0.11
SKP2-209ENST00000620197 LARGE1O95461 756 aa15.76■□□□□ 0.11
SKP2-209ENST00000620197 NBPF7P0C2Y1 421 aaPredicted RBP15.76■□□□□ 0.11
SKP2-209ENST00000620197 CYB5RLQ6IPT4 315 aa15.76■□□□□ 0.11
SKP2-209ENST00000620197 RNF214Q8ND24 703 aa15.76■□□□□ 0.11
SKP2-209ENST00000620197 ZSWIM6Q9HCJ5 1215 aa15.76■□□□□ 0.11
SKP2-209ENST00000620197 IL1RAPL2Q9NP60 686 aa15.76■□□□□ 0.11
SKP2-209ENST00000620197 STX6O43752 255 aa15.76■□□□□ 0.11
SKP2-209ENST00000620197 MYRIPQ8NFW9 859 aa15.76■□□□□ 0.11
SKP2-209ENST00000620197 NPHP4O75161 1426 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 152.6 ms