RNA–Protein interactions for RNA: ENST00000619157.4

CBWD1-228, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 1,227 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-228ENST00000619157 CDK11AQ9UQ88 783 aaPredicted RBP11.96□□□□□ -0.49
CBWD1-228ENST00000619157 RICTORQ6R327 1708 aa11.96□□□□□ -0.49
CBWD1-228ENST00000619157 MYO5CQ9NQX4 1742 aa11.95□□□□□ -0.5
CBWD1-228ENST00000619157 ACDQ96AP0 544 aa11.95□□□□□ -0.5
CBWD1-228ENST00000619157 DCAF5Q96JK2 942 aa11.95□□□□□ -0.5
CBWD1-228ENST00000619157 DENND4BO75064 1496 aaPredicted RBP11.95□□□□□ -0.5
CBWD1-228ENST00000619157 CFAP74Q9C0B2 1584 aa11.94□□□□□ -0.5
CBWD1-228ENST00000619157 BCRP11274 1271 aa11.94□□□□□ -0.5
CBWD1-228ENST00000619157 SLC27A3Q5K4L6 730 aa11.94□□□□□ -0.5
CBWD1-228ENST00000619157 ADGRL1O94910 1474 aa11.94□□□□□ -0.5
CBWD1-228ENST00000619157 GMCL1Q96IK5 515 aa11.93□□□□□ -0.5
CBWD1-228ENST00000619157 DYRK1BQ9Y463 629 aa11.93□□□□□ -0.5
CBWD1-228ENST00000619157 CDC42BPBQ9Y5S2 1711 aa11.93□□□□□ -0.5
CBWD1-228ENST00000619157 SCAPERQ9BY12 1400 aa11.93□□□□□ -0.5
CBWD1-228ENST00000619157 PREX2Q70Z35 1606 aa11.93□□□□□ -0.5
CBWD1-228ENST00000619157 ARHGEF12Q9NZN5 1544 aa11.92□□□□□ -0.5
CBWD1-228ENST00000619157 ZBBXA8MT70 800 aa11.92□□□□□ -0.5
CBWD1-228ENST00000619157 PHF20L1A8MW92 1017 aa11.92□□□□□ -0.5
CBWD1-228ENST00000619157 MSTNO14793 375 aa11.92□□□□□ -0.5
CBWD1-228ENST00000619157 ITGB2P05107 769 aa11.92□□□□□ -0.5
CBWD1-228ENST00000619157 FBXO45P0C2W1 286 aa11.92□□□□□ -0.5
CBWD1-228ENST00000619157 GPC1P35052 558 aa11.92□□□□□ -0.5
CBWD1-228ENST00000619157 PODNQ7Z5L7 613 aa11.92□□□□□ -0.5
CBWD1-228ENST00000619157 POGZQ7Z3K3 1410 aa11.92□□□□□ -0.5
CBWD1-228ENST00000619157 VPS8Q8N3P4 1428 aa11.92□□□□□ -0.5
CBWD1-228ENST00000619157 ZMYM4Q5VZL5 1548 aa11.91□□□□□ -0.5
CBWD1-228ENST00000619157 NLRP3Q96P20 1036 aa11.91□□□□□ -0.5
CBWD1-228ENST00000619157 SPOCK3Q9BQ16 436 aa11.91□□□□□ -0.5
CBWD1-228ENST00000619157 YEATS2Q9ULM3 1422 aa11.91□□□□□ -0.5
CBWD1-228ENST00000619157 CDC42BPAQ5VT25 1732 aa11.91□□□□□ -0.5
CBWD1-228ENST00000619157 SIGLEC1Q9BZZ2 1709 aa11.91□□□□□ -0.5
CBWD1-228ENST00000619157 ARHGAP5Q13017 1502 aa11.91□□□□□ -0.5
CBWD1-228ENST00000619157 GPATCH8Q9UKJ3 1502 aaKnown RBP11.91□□□□□ -0.5
CBWD1-228ENST00000619157 SCTRP47872 440 aa11.9□□□□□ -0.5
CBWD1-228ENST00000619157 ERVK-9P63128 1117 aa11.9□□□□□ -0.5
CBWD1-228ENST00000619157 EFCAB2Q5VUJ9 269 aa11.9□□□□□ -0.5
CBWD1-228ENST00000619157 CC2D2BQ6DHV5 1058 aa11.9□□□□□ -0.5
CBWD1-228ENST00000619157 TRERF1Q96PN7 1200 aa11.9□□□□□ -0.5
CBWD1-228ENST00000619157 ARHGEF40Q8TER5 1519 aa11.9□□□□□ -0.5
CBWD1-228ENST00000619157 H7C1W4 665 aa11.89□□□□□ -0.51
CBWD1-228ENST00000619157 NBPF10Q6P3W6 841 aaKnown RBP11.89□□□□□ -0.51
CBWD1-228ENST00000619157 NBPF15Q8N660 670 aa11.89□□□□□ -0.51
CBWD1-228ENST00000619157 BEND7Q8N7W2 519 aaPredicted RBP11.89□□□□□ -0.51
CBWD1-228ENST00000619157 TIAM1Q13009 1591 aa11.88□□□□□ -0.51
CBWD1-228ENST00000619157 ABCC1P33527 1531 aa11.88□□□□□ -0.51
CBWD1-228ENST00000619157 EHBP1L1Q8N3D4 1523 aa11.88□□□□□ -0.51
CBWD1-228ENST00000619157 MX2P20592 715 aa11.88□□□□□ -0.51
CBWD1-228ENST00000619157 ARHGEF10LQ9HCE6 1279 aa11.88□□□□□ -0.51
CBWD1-228ENST00000619157 MTUS2Q5JR59 1369 aa11.88□□□□□ -0.51
CBWD1-228ENST00000619157 KDM5CP41229 1560 aa11.88□□□□□ -0.51
CBWD1-228ENST00000619157 SAMD9LQ8IVG5 1584 aa11.88□□□□□ -0.51
CBWD1-228ENST00000619157 TRAPPC8Q9Y2L5 1435 aa11.87□□□□□ -0.51
CBWD1-228ENST00000619157 TRIM52Q96A61 297 aa11.87□□□□□ -0.51
CBWD1-228ENST00000619157 AFAP1Q8N556 730 aa11.86□□□□□ -0.51
CBWD1-228ENST00000619157 GRIP2Q9C0E4 1043 aa11.86□□□□□ -0.51
CBWD1-228ENST00000619157 NUCKS1Q9H1E3 243 aaKnown RBP11.86□□□□□ -0.51
CBWD1-228ENST00000619157 TIMMDC1Q9NPL8 285 aa11.86□□□□□ -0.51
CBWD1-228ENST00000619157 RAB6BQ9NRW1 208 aa11.86□□□□□ -0.51
CBWD1-228ENST00000619157 PCDHB11Q9Y5F2 797 aa11.86□□□□□ -0.51
CBWD1-228ENST00000619157 ZFYVE16Q7Z3T8 1539 aa11.86□□□□□ -0.51
CBWD1-228ENST00000619157 ADAM23O75077 832 aa11.85□□□□□ -0.51
CBWD1-228ENST00000619157 CLN3Q13286 438 aa11.85□□□□□ -0.51
CBWD1-228ENST00000619157 CYP2U1Q7Z449 544 aa11.85□□□□□ -0.51
CBWD1-228ENST00000619157 GJD4Q96KN9 370 aaPredicted RBP11.85□□□□□ -0.51
CBWD1-228ENST00000619157 ITSN2Q9NZM3 1697 aa11.84□□□□□ -0.51
CBWD1-228ENST00000619157 ZNF518AQ6AHZ1 1483 aa11.84□□□□□ -0.51
CBWD1-228ENST00000619157 MAGI2Q86UL8 1455 aa11.84□□□□□ -0.51
CBWD1-228ENST00000619157 PROCP04070 461 aa11.84□□□□□ -0.51
CBWD1-228ENST00000619157 GALNT6Q8NCL4 622 aa11.84□□□□□ -0.51
CBWD1-228ENST00000619157 GPAMQ9HCL2 828 aa11.84□□□□□ -0.51
CBWD1-228ENST00000619157 NCOA2Q15596 1464 aa11.83□□□□□ -0.52
CBWD1-228ENST00000619157 LRRC9Q6ZRR7 1453 aa11.83□□□□□ -0.52
CBWD1-228ENST00000619157 SYCP2Q9BX26 1530 aa11.83□□□□□ -0.52
CBWD1-228ENST00000619157 WASLO00401 505 aaPredicted RBP11.83□□□□□ -0.52
CBWD1-228ENST00000619157 KANK4Q5T7N3 995 aaPredicted RBP11.83□□□□□ -0.52
CBWD1-228ENST00000619157 OSBPL3Q9H4L5 887 aa11.83□□□□□ -0.52
CBWD1-228ENST00000619157 ADAMTSL3P82987 1691 aa11.83□□□□□ -0.52
CBWD1-228ENST00000619157 ZNF644Q9H582 1327 aaPredicted RBP11.83□□□□□ -0.52
CBWD1-228ENST00000619157 CCNB3Q8WWL7 1395 aa11.82□□□□□ -0.52
CBWD1-228ENST00000619157 SNRPNP63162 240 aaKnown RBP11.82□□□□□ -0.52
CBWD1-228ENST00000619157 XP32Q5T750 250 aa11.82□□□□□ -0.52
CBWD1-228ENST00000619157 TAS1R3Q7RTX0 852 aa11.82□□□□□ -0.52
CBWD1-228ENST00000619157 NSFL1CQ9UNZ2 370 aaKnown RBP11.82□□□□□ -0.52
CBWD1-228ENST00000619157 MAP3K1Q13233 1512 aa11.81□□□□□ -0.52
CBWD1-228ENST00000619157 BCORL1Q5H9F3 1711 aa11.81□□□□□ -0.52
CBWD1-228ENST00000619157 DIP2CQ9Y2E4 1556 aa11.81□□□□□ -0.52
CBWD1-228ENST00000619157 SPATA31C2B4DYI2 1134 aa11.81□□□□□ -0.52
CBWD1-228ENST00000619157 OIP5O43482 229 aa11.81□□□□□ -0.52
CBWD1-228ENST00000619157 F11P03951 625 aa11.81□□□□□ -0.52
CBWD1-228ENST00000619157 THBS1P07996 1170 aa11.81□□□□□ -0.52
CBWD1-228ENST00000619157 TMEM259Q4ZIN3 620 aa11.81□□□□□ -0.52
CBWD1-228ENST00000619157 RNF20Q5VTR2 975 aa11.81□□□□□ -0.52
CBWD1-228ENST00000619157 PCMTD1Q96MG8 357 aaPredicted RBP11.81□□□□□ -0.52
CBWD1-228ENST00000619157 OXCT2Q9BYC2 517 aaPredicted RBP11.81□□□□□ -0.52
CBWD1-228ENST00000619157 ZNF777Q9ULD5 760 aaPredicted RBP11.81□□□□□ -0.52
CBWD1-228ENST00000619157 ABCA6Q8N139 1617 aa11.81□□□□□ -0.52
CBWD1-228ENST00000619157 MLH3Q9UHC1 1453 aa11.81□□□□□ -0.52
CBWD1-228ENST00000619157 HECW2Q9P2P5 1572 aa11.8□□□□□ -0.52
CBWD1-228ENST00000619157 PHKA2P46019 1235 aa11.8□□□□□ -0.52
CBWD1-228ENST00000619157 HNRNPMP52272 730 aaKnown RBP eCLIP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms