RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 THOC2Q8NI27 1593 aaKnown RBP13.06□□□□□ -0.32
POLR2A-209ENST00000617998 DCTN1Q14203 1278 aa13.05□□□□□ -0.32
POLR2A-209ENST00000617998 AACSQ86V21 672 aa13.05□□□□□ -0.32
POLR2A-209ENST00000617998 EXOSC9Q06265 439 aaKnown RBP13.05□□□□□ -0.32
POLR2A-209ENST00000617998 GGA1Q9UJY5 639 aa13.05□□□□□ -0.32
POLR2A-209ENST00000617998 IP6K1Q92551 441 aa13.05□□□□□ -0.32
POLR2A-209ENST00000617998 TSR1Q2NL82 804 aaKnown RBP13.04□□□□□ -0.32
POLR2A-209ENST00000617998 HSP90AB2PQ58FF8 381 aa13.04□□□□□ -0.32
POLR2A-209ENST00000617998 CT47A1Q5JQC4 288 aaPredicted RBP13.04□□□□□ -0.32
POLR2A-209ENST00000617998 FOSBP53539 338 aa13.04□□□□□ -0.32
POLR2A-209ENST00000617998 RBM27Q9P2N5 1060 aaKnown RBP13.04□□□□□ -0.32
POLR2A-209ENST00000617998 PCF11O94913 1555 aaKnown RBP13.04□□□□□ -0.32
POLR2A-209ENST00000617998 ANKRD13DQ6ZTN6 518 aa13.04□□□□□ -0.32
POLR2A-209ENST00000617998 MPNDQ8N594 471 aa13.04□□□□□ -0.32
POLR2A-209ENST00000617998 SPC25Q9HBM1 224 aa13.03□□□□□ -0.32
POLR2A-209ENST00000617998 RNF181Q9P0P0 153 aa13.03□□□□□ -0.32
POLR2A-209ENST00000617998 UGGT2Q9NYU1 1516 aa13.03□□□□□ -0.32
POLR2A-209ENST00000617998 PPP1R12BO60237 982 aaPredicted RBP13.03□□□□□ -0.32
POLR2A-209ENST00000617998 REC8O95072 547 aa13.03□□□□□ -0.32
POLR2A-209ENST00000617998 EPS15P42566 896 aa13.03□□□□□ -0.32
POLR2A-209ENST00000617998 FAM83GA6ND36 823 aa13.03□□□□□ -0.32
POLR2A-209ENST00000617998 MYCP01106 439 aaPredicted RBP13.03□□□□□ -0.32
POLR2A-209ENST00000617998 NUP153P49790 1475 aaKnown RBP13.03□□□□□ -0.32
POLR2A-209ENST00000617998 ATP2B1P20020 1258 aa13.03□□□□□ -0.32
POLR2A-209ENST00000617998 SLC5A4Q9NY91 659 aa13.03□□□□□ -0.32
POLR2A-209ENST00000617998 UGGT1Q9NYU2 1555 aa13.03□□□□□ -0.32
POLR2A-209ENST00000617998 MAGI2Q86UL8 1455 aa13.03□□□□□ -0.32
POLR2A-209ENST00000617998 PDE3AQ14432 1141 aa13.02□□□□□ -0.32
POLR2A-209ENST00000617998 ZHX3Q9H4I2 956 aa13.02□□□□□ -0.32
POLR2A-209ENST00000617998 PIM2Q9P1W9 311 aa13.02□□□□□ -0.32
POLR2A-209ENST00000617998 PIBF1Q8WXW3 757 aa13.02□□□□□ -0.32
POLR2A-209ENST00000617998 CCDC125Q86Z20 511 aa13.02□□□□□ -0.32
POLR2A-209ENST00000617998 TIAM1Q13009 1591 aa13.02□□□□□ -0.33
POLR2A-209ENST00000617998 ERFEQ4G0M1 354 aa13.02□□□□□ -0.33
POLR2A-209ENST00000617998 ERICH6BQ5W0A0 696 aa13.02□□□□□ -0.33
POLR2A-209ENST00000617998 TMEM106CQ9BVX2 250 aa13.02□□□□□ -0.33
POLR2A-209ENST00000617998 SCAF11Q99590 1463 aaKnown RBP13.02□□□□□ -0.33
POLR2A-209ENST00000617998 DLGAP5Q15398 846 aa13.02□□□□□ -0.33
POLR2A-209ENST00000617998 PARP10Q53GL7 1025 aa13.02□□□□□ -0.33
POLR2A-209ENST00000617998 PBRM1Q86U86 1689 aa13.01□□□□□ -0.33
POLR2A-209ENST00000617998 SLC4A8Q2Y0W8 1093 aa13.01□□□□□ -0.33
POLR2A-209ENST00000617998 TRIM22Q8IYM9 498 aa13.01□□□□□ -0.33
POLR2A-209ENST00000617998 CCDC24Q8N4L8 307 aa13.01□□□□□ -0.33
POLR2A-209ENST00000617998 CNGA1P29973 690 aa13.01□□□□□ -0.33
POLR2A-209ENST00000617998 C2orf69Q8N8R5 385 aa13.01□□□□□ -0.33
POLR2A-209ENST00000617998 PPP4R2Q9NY27 417 aa13.01□□□□□ -0.33
POLR2A-209ENST00000617998 HOOK1Q9UJC3 728 aaKnown RBP13.01□□□□□ -0.33
POLR2A-209ENST00000617998 MVPQ14764 893 aaKnown RBP13.01□□□□□ -0.33
POLR2A-209ENST00000617998 GLRX3O76003 335 aaKnown RBP13.01□□□□□ -0.33
POLR2A-209ENST00000617998 ARMC9Q7Z3E5 817 aa13.01□□□□□ -0.33
POLR2A-209ENST00000617998 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.01□□□□□ -0.33
POLR2A-209ENST00000617998 TNFAIP1Q13829 316 aa13.01□□□□□ -0.33
POLR2A-209ENST00000617998 ZFYVE27Q5T4F4 411 aa13.01□□□□□ -0.33
POLR2A-209ENST00000617998 TSR2Q969E8 191 aaKnown RBP13.01□□□□□ -0.33
POLR2A-209ENST00000617998 PPP4R3BQ5MIZ7 849 aa13□□□□□ -0.33
POLR2A-209ENST00000617998 NPATQ14207 1427 aa13□□□□□ -0.33
POLR2A-209ENST00000617998 IRX3P78415 501 aaPredicted RBP13□□□□□ -0.33
POLR2A-209ENST00000617998 UBE3BQ7Z3V4 1068 aa13□□□□□ -0.33
POLR2A-209ENST00000617998 PSMA5P28066 241 aa13□□□□□ -0.33
POLR2A-209ENST00000617998 DNAAF4Q8WXU2 420 aa13□□□□□ -0.33
POLR2A-209ENST00000617998 CTNNA3Q9UI47 895 aa13□□□□□ -0.33
POLR2A-209ENST00000617998 MAP3K2Q9Y2U5 619 aa13□□□□□ -0.33
POLR2A-209ENST00000617998 NAPBQ9H115 298 aa12.99□□□□□ -0.33
POLR2A-209ENST00000617998 RANBP6O60518 1105 aaKnown RBP12.99□□□□□ -0.33
POLR2A-209ENST00000617998 TXLNAP40222 546 aa12.99□□□□□ -0.33
POLR2A-209ENST00000617998 PIP4K2AP48426 406 aaPredicted RBP12.99□□□□□ -0.33
POLR2A-209ENST00000617998 ANKRD20A12PQ8NF67 263 aa12.99□□□□□ -0.33
POLR2A-209ENST00000617998 CRNKL1Q9BZJ0 848 aaKnown RBP12.99□□□□□ -0.33
POLR2A-209ENST00000617998 KIF7Q2M1P5 1343 aa12.99□□□□□ -0.33
POLR2A-209ENST00000617998 IRS4O14654 1257 aaPredicted RBP12.99□□□□□ -0.33
POLR2A-209ENST00000617998 DNTTIP2Q5QJE6 756 aaKnown RBP12.99□□□□□ -0.33
POLR2A-209ENST00000617998 WDR97A6NE52 1622 aa12.99□□□□□ -0.33
POLR2A-209ENST00000617998 IQSEC3Q9UPP2 1182 aaPredicted RBP12.99□□□□□ -0.33
POLR2A-209ENST00000617998 USP48Q86UV5 1035 aa12.99□□□□□ -0.33
POLR2A-209ENST00000617998 PTPN23Q9H3S7 1636 aa12.98□□□□□ -0.33
POLR2A-209ENST00000617998 GIGYF1O75420 1035 aaPredicted RBP12.98□□□□□ -0.33
POLR2A-209ENST00000617998 BRINP3Q76B58 766 aa12.98□□□□□ -0.33
POLR2A-209ENST00000617998 XAGE3Q8WTP9 111 aa12.98□□□□□ -0.33
POLR2A-209ENST00000617998 THRAP3Q9Y2W1 955 aaKnown RBP12.98□□□□□ -0.33
POLR2A-209ENST00000617998 YTHDC2Q9H6S0 1430 aaKnown RBP12.98□□□□□ -0.33
POLR2A-209ENST00000617998 ATP7AQ04656 1500 aa12.98□□□□□ -0.33
POLR2A-209ENST00000617998 CHD1O14646 1710 aa12.98□□□□□ -0.33
POLR2A-209ENST00000617998 ADAMTS8Q9UP79 889 aa12.98□□□□□ -0.33
POLR2A-209ENST00000617998 BRD4O60885 1362 aaPredicted RBP12.98□□□□□ -0.33
POLR2A-209ENST00000617998 THUMPD2Q9BTF0 503 aaKnown RBP12.98□□□□□ -0.33
POLR2A-209ENST00000617998 FLT4P35916 1363 aa12.98□□□□□ -0.33
POLR2A-209ENST00000617998 PLCG2P16885 1265 aa12.98□□□□□ -0.33
POLR2A-209ENST00000617998 PABPC4Q13310 644 aaKnown RBP eCLIP12.98□□□□□ -0.333e-8■■■□□ 15.5
POLR2A-209ENST00000617998 COPS6Q7L5N1 327 aa12.97□□□□□ -0.33
POLR2A-209ENST00000617998 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.97□□□□□ -0.331e-6■■■■■ 34
POLR2A-209ENST00000617998 HOXC9P31274 260 aa12.97□□□□□ -0.33
POLR2A-209ENST00000617998 VSIG10Q8N0Z9 540 aa12.97□□□□□ -0.33
POLR2A-209ENST00000617998 SH2D4AQ9H788 454 aa12.97□□□□□ -0.33
POLR2A-209ENST00000617998 IQCA1LA6NCM1 817 aa12.97□□□□□ -0.33
POLR2A-209ENST00000617998 NBPF3Q9H094 633 aa12.97□□□□□ -0.33
POLR2A-209ENST00000617998 TRAF1Q13077 416 aa12.97□□□□□ -0.33
POLR2A-209ENST00000617998 MAST3O60307 1309 aa12.97□□□□□ -0.33
POLR2A-209ENST00000617998 PDE4BQ07343 736 aa12.96□□□□□ -0.33
POLR2A-209ENST00000617998 CKAP2LQ8IYA6 745 aa12.96□□□□□ -0.33
POLR2A-209ENST00000617998 ITSN2Q9NZM3 1697 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms