RNA–Protein interactions for RNA: ENST00000617757.1

TARDBP-219, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-219ENST00000617757 CCDC30Q5VVM6 783 aa10.35□□□□□ -0.75
TARDBP-219ENST00000617757 SMARCC1Q92922 1105 aaPredicted RBP10.35□□□□□ -0.75
TARDBP-219ENST00000617757 RBM42Q9BTD8 480 aaKnown RBP10.35□□□□□ -0.75
TARDBP-219ENST00000617757 CHMP4AQ9BY43 222 aa10.35□□□□□ -0.75
TARDBP-219ENST00000617757 USP16Q9Y5T5 823 aa10.35□□□□□ -0.75
TARDBP-219ENST00000617757 PLIN1O60240 522 aa10.34□□□□□ -0.75
TARDBP-219ENST00000617757 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.34□□□□□ -0.75
TARDBP-219ENST00000617757 NECTIN2Q92692 538 aa10.34□□□□□ -0.75
TARDBP-219ENST00000617757 SLC4A9Q96Q91 983 aa10.34□□□□□ -0.75
TARDBP-219ENST00000617757 BCL11BQ9C0K0 894 aaPredicted RBP10.34□□□□□ -0.75
TARDBP-219ENST00000617757 PALLDQ8WX93 1383 aa10.34□□□□□ -0.75
TARDBP-219ENST00000617757 MYH14Q7Z406 1995 aaKnown RBP10.34□□□□□ -0.75
TARDBP-219ENST00000617757 SOCS7O14512 581 aa10.33□□□□□ -0.76
TARDBP-219ENST00000617757 SLC4A2P04920 1241 aa10.33□□□□□ -0.76
TARDBP-219ENST00000617757 STK31Q9BXU1 1019 aa10.33□□□□□ -0.76
TARDBP-219ENST00000617757 TEX13AQ9BXU3 409 aaPredicted RBP10.33□□□□□ -0.76
TARDBP-219ENST00000617757 NOB1Q9ULX3 412 aaKnown RBP10.33□□□□□ -0.76
TARDBP-219ENST00000617757 RGPD3A6NKT7 1758 aaPredicted RBP10.33□□□□□ -0.76
TARDBP-219ENST00000617757 RGPD4Q7Z3J3 1758 aa10.33□□□□□ -0.76
TARDBP-219ENST00000617757 KIF16BQ96L93 1317 aa10.33□□□□□ -0.76
TARDBP-219ENST00000617757 TRIM37O94972 964 aa10.32□□□□□ -0.76
TARDBP-219ENST00000617757 CANXP27824 592 aaKnown RBP10.32□□□□□ -0.76
TARDBP-219ENST00000617757 ZKSCAN2Q63HK3 967 aa10.32□□□□□ -0.76
TARDBP-219ENST00000617757 G2E3Q7L622 706 aa10.32□□□□□ -0.76
TARDBP-219ENST00000617757 DNAJC10Q8IXB1 793 aa10.32□□□□□ -0.76
TARDBP-219ENST00000617757 FRAT1Q92837 279 aaPredicted RBP10.32□□□□□ -0.76
TARDBP-219ENST00000617757 CHPF2Q9P2E5 772 aa10.32□□□□□ -0.76
TARDBP-219ENST00000617757 NUP188Q5SRE5 1749 aa10.32□□□□□ -0.76
TARDBP-219ENST00000617757 ARFGEF2Q9Y6D5 1785 aa10.31□□□□□ -0.76
TARDBP-219ENST00000617757 LOC102724428A0A0B4J2F2 783 aa10.31□□□□□ -0.76
TARDBP-219ENST00000617757 ANXA1P04083 346 aa10.31□□□□□ -0.76
TARDBP-219ENST00000617757 ATP6V1AP38606 617 aa10.31□□□□□ -0.76
TARDBP-219ENST00000617757 SIK1P57059 783 aa10.31□□□□□ -0.76
TARDBP-219ENST00000617757 PDIA6Q15084 440 aa10.31□□□□□ -0.76
TARDBP-219ENST00000617757 ARHGAP45Q92619 1136 aa10.31□□□□□ -0.76
TARDBP-219ENST00000617757 DDX21Q9NR30 783 aaKnown RBP eCLIP10.31□□□□□ -0.76
TARDBP-219ENST00000617757 DBF4Q9UBU7 674 aaPredicted RBP10.31□□□□□ -0.76
TARDBP-219ENST00000617757 ERBB4Q15303 1308 aa10.31□□□□□ -0.76
TARDBP-219ENST00000617757 AFDNP55196 1824 aaKnown RBP10.3□□□□□ -0.76
TARDBP-219ENST00000617757 EP400Q96L91 3159 aa10.3□□□□□ -0.76
TARDBP-219ENST00000617757 IPO8O15397 1037 aaKnown RBP10.3□□□□□ -0.76
TARDBP-219ENST00000617757 A1BGP04217 495 aa10.3□□□□□ -0.76
TARDBP-219ENST00000617757 IRX6P78412 446 aaPredicted RBP10.3□□□□□ -0.76
TARDBP-219ENST00000617757 PROSER3Q2NL68 480 aa10.3□□□□□ -0.76
TARDBP-219ENST00000617757 C20orf194Q5TEA3 1177 aa10.3□□□□□ -0.76
TARDBP-219ENST00000617757 ATF7IPQ6VMQ6 1270 aa10.3□□□□□ -0.76
TARDBP-219ENST00000617757 PHAXQ9H814 394 aaKnown RBP10.3□□□□□ -0.76
TARDBP-219ENST00000617757 TNNQ9UQP3 1299 aa10.3□□□□□ -0.76
TARDBP-219ENST00000617757 PTPRCP08575 1304 aa10.3□□□□□ -0.76
TARDBP-219ENST00000617757 C4BP0C0L5 1744 aa10.3□□□□□ -0.76
TARDBP-219ENST00000617757 NUP98P52948 1817 aa10.29□□□□□ -0.76
TARDBP-219ENST00000617757 NBPF26B4DH59 902 aa10.29□□□□□ -0.76
TARDBP-219ENST00000617757 NEFLP07196 543 aa10.29□□□□□ -0.76
TARDBP-219ENST00000617757 CYP19A1P11511 503 aaPredicted RBP10.29□□□□□ -0.76
TARDBP-219ENST00000617757 TRIM27P14373 513 aa10.29□□□□□ -0.76
TARDBP-219ENST00000617757 ITPK1Q13572 414 aa10.29□□□□□ -0.76
TARDBP-219ENST00000617757 PDE3AQ14432 1141 aa10.29□□□□□ -0.76
TARDBP-219ENST00000617757 NBPF14Q5TI25 921 aa10.29□□□□□ -0.76
TARDBP-219ENST00000617757 NBPF10Q6P3W6 841 aaKnown RBP10.29□□□□□ -0.76
TARDBP-219ENST00000617757 NBPF15Q8N660 670 aa10.29□□□□□ -0.76
TARDBP-219ENST00000617757 HYPKQ9NX55 129 aa10.29□□□□□ -0.76
TARDBP-219ENST00000617757 UBR3Q6ZT12 1888 aa10.28□□□□□ -0.76
TARDBP-219ENST00000617757 STARD3NLO95772 234 aa10.28□□□□□ -0.76
TARDBP-219ENST00000617757 MS4A1P11836 297 aa10.28□□□□□ -0.76
TARDBP-219ENST00000617757 MYL6BP14649 208 aa10.28□□□□□ -0.76
TARDBP-219ENST00000617757 PIP4K2AP48426 406 aaPredicted RBP10.28□□□□□ -0.76
TARDBP-219ENST00000617757 FLIIQ13045 1269 aa10.28□□□□□ -0.76
TARDBP-219ENST00000617757 LRP10Q7Z4F1 713 aa10.28□□□□□ -0.76
TARDBP-219ENST00000617757 PANK1Q8TE04 598 aa10.28□□□□□ -0.76
TARDBP-219ENST00000617757 API5Q9BZZ5 524 aaKnown RBP10.28□□□□□ -0.76
TARDBP-219ENST00000617757 ANKRD36CQ5JPF3 1778 aa10.28□□□□□ -0.76
TARDBP-219ENST00000617757 BCORQ6W2J9 1755 aa10.27□□□□□ -0.77
TARDBP-219ENST00000617757 PLSCR1O15162 318 aa10.27□□□□□ -0.77
TARDBP-219ENST00000617757 RLBP1P12271 317 aa10.27□□□□□ -0.77
TARDBP-219ENST00000617757 KCNQ4P56696 695 aa10.27□□□□□ -0.77
TARDBP-219ENST00000617757 FKBP5Q13451 457 aaPredicted RBP10.27□□□□□ -0.77
TARDBP-219ENST00000617757 FKBP8Q14318 412 aa10.27□□□□□ -0.77
TARDBP-219ENST00000617757 DZIP1LQ8IYY4 767 aaKnown RBP10.27□□□□□ -0.77
TARDBP-219ENST00000617757 LINC00116Q8NCU8 138 aa10.27□□□□□ -0.77
TARDBP-219ENST00000617757 CLUAP1Q96AJ1 413 aa10.27□□□□□ -0.77
TARDBP-219ENST00000617757 CCNL1Q9UK58 526 aaPredicted RBP10.27□□□□□ -0.77
TARDBP-219ENST00000617757 ABCC4O15439 1325 aa10.27□□□□□ -0.77
TARDBP-219ENST00000617757 C4AP0C0L4 1744 aa10.27□□□□□ -0.77
TARDBP-219ENST00000617757 TUBGCP6Q96RT7 1819 aa10.26□□□□□ -0.77
TARDBP-219ENST00000617757 PXDNLA1KZ92 1463 aa10.26□□□□□ -0.77
TARDBP-219ENST00000617757 APBA3O96018 575 aa10.26□□□□□ -0.77
TARDBP-219ENST00000617757 INTS5Q6P9B9 1019 aaKnown RBP10.26□□□□□ -0.77
TARDBP-219ENST00000617757 COPS6Q7L5N1 327 aa10.26□□□□□ -0.77
TARDBP-219ENST00000617757 FTSJ3Q8IY81 847 aaKnown RBP10.26□□□□□ -0.77
TARDBP-219ENST00000617757 XAGE3Q8WTP9 111 aa10.26□□□□□ -0.77
TARDBP-219ENST00000617757 CRBNQ96SW2 442 aa10.26□□□□□ -0.77
TARDBP-219ENST00000617757 CCDC87Q9NVE4 849 aa10.26□□□□□ -0.77
TARDBP-219ENST00000617757 ZBTB1Q9Y2K1 713 aa10.26□□□□□ -0.77
TARDBP-219ENST00000617757 ADCY9O60503 1353 aa10.26□□□□□ -0.77
TARDBP-219ENST00000617757 F6X3S4 739 aa10.25□□□□□ -0.77
TARDBP-219ENST00000617757 DDX58O95786 925 aaKnown RBP10.25□□□□□ -0.77
TARDBP-219ENST00000617757 IL6STP40189 918 aaPredicted RBP10.25□□□□□ -0.77
TARDBP-219ENST00000617757 CRKLP46109 303 aaKnown RBP10.25□□□□□ -0.77
TARDBP-219ENST00000617757 AIMP1Q12904 312 aaKnown RBP10.25□□□□□ -0.77
TARDBP-219ENST00000617757 KSR2Q6VAB6 950 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms