RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 CANXP27824 592 aaKnown RBP12.87□□□□□ -0.35
TARDBP-218ENST00000617172 EIF5P55010 431 aaKnown RBP12.87□□□□□ -0.35
TARDBP-218ENST00000617172 KCPQ6ZWJ8 1503 aa12.87□□□□□ -0.35
TARDBP-218ENST00000617172 C10orf71Q711Q0 1435 aa12.87□□□□□ -0.35
TARDBP-218ENST00000617172 COL15A1P39059 1388 aa12.86□□□□□ -0.35
TARDBP-218ENST00000617172 POLRMTO00411 1230 aaKnown RBP12.86□□□□□ -0.35
TARDBP-218ENST00000617172 GIGYF1O75420 1035 aaPredicted RBP12.86□□□□□ -0.35
TARDBP-218ENST00000617172 DPEP1P16444 411 aa12.86□□□□□ -0.35
TARDBP-218ENST00000617172 PIM2Q9P1W9 311 aa12.86□□□□□ -0.35
TARDBP-218ENST00000617172 BCS1LQ9Y276 419 aa12.86□□□□□ -0.35
TARDBP-218ENST00000617172 MYH14Q7Z406 1995 aaKnown RBP12.86□□□□□ -0.35
TARDBP-218ENST00000617172 PXDNLA1KZ92 1463 aa12.85□□□□□ -0.35
TARDBP-218ENST00000617172 IL6STP40189 918 aaPredicted RBP12.85□□□□□ -0.35
TARDBP-218ENST00000617172 C1QTNF8P60827 252 aa12.85□□□□□ -0.35
TARDBP-218ENST00000617172 DDR1Q08345 913 aa12.85□□□□□ -0.35
TARDBP-218ENST00000617172 RALBP1Q15311 655 aa12.85□□□□□ -0.35
TARDBP-218ENST00000617172 WWC3Q9ULE0 1092 aa12.85□□□□□ -0.35
TARDBP-218ENST00000617172 TJP1Q07157 1748 aa12.85□□□□□ -0.35
TARDBP-218ENST00000617172 SNRPA1P09661 255 aaKnown RBP12.84□□□□□ -0.35
TARDBP-218ENST00000617172 KCNA3P22001 575 aa12.84□□□□□ -0.35
TARDBP-218ENST00000617172 NFIXQ14938 502 aa12.84□□□□□ -0.35
TARDBP-218ENST00000617172 TAF7Q15545 349 aaPredicted RBP12.84□□□□□ -0.35
TARDBP-218ENST00000617172 GPBP1L1Q9HC44 474 aaPredicted RBP12.84□□□□□ -0.35
TARDBP-218ENST00000617172 C4AP0C0L4 1744 aa12.83□□□□□ -0.36
TARDBP-218ENST00000617172 DALRD3Q5D0E6 543 aaKnown RBP12.83□□□□□ -0.36
TARDBP-218ENST00000617172 ARHGAP27Q6ZUM4 889 aa12.83□□□□□ -0.36
TARDBP-218ENST00000617172 MCM10Q7L590 875 aa12.83□□□□□ -0.36
TARDBP-218ENST00000617172 BCL2L12Q9HB09 334 aa12.83□□□□□ -0.36
TARDBP-218ENST00000617172 A1BGP04217 495 aa12.82□□□□□ -0.36
TARDBP-218ENST00000617172 SERPINB2P05120 415 aa12.82□□□□□ -0.36
TARDBP-218ENST00000617172 PNISRQ8TF01 805 aaKnown RBP12.82□□□□□ -0.36
TARDBP-218ENST00000617172 ATP10DQ9P241 1426 aa12.81□□□□□ -0.36
TARDBP-218ENST00000617172 KCNQ3O43525 872 aa12.81□□□□□ -0.36
TARDBP-218ENST00000617172 PLEKHF1Q96S99 279 aa12.81□□□□□ -0.36
TARDBP-218ENST00000617172 PDZRN3Q9UPQ7 1066 aa12.81□□□□□ -0.36
TARDBP-218ENST00000617172 ZNF330Q9Y3S2 320 aaPredicted RBP12.81□□□□□ -0.36
TARDBP-218ENST00000617172 USP16Q9Y5T5 823 aa12.81□□□□□ -0.36
TARDBP-218ENST00000617172 DCTN1Q14203 1278 aa12.8□□□□□ -0.36
TARDBP-218ENST00000617172 TBC1D2BQ9UPU7 963 aa12.8□□□□□ -0.36
TARDBP-218ENST00000617172 KIF13BQ9NQT8 1826 aa12.8□□□□□ -0.36
TARDBP-218ENST00000617172 MAPK8IP3Q9UPT6 1336 aa12.8□□□□□ -0.36
TARDBP-218ENST00000617172 ADCY9O60503 1353 aa12.8□□□□□ -0.36
TARDBP-218ENST00000617172 H0YIN7 160 aa12.79□□□□□ -0.36
TARDBP-218ENST00000617172 RGL2O15211 777 aa12.79□□□□□ -0.36
TARDBP-218ENST00000617172 CHRNA5P30532 468 aa12.79□□□□□ -0.36
TARDBP-218ENST00000617172 DDX10Q13206 875 aaKnown RBP12.79□□□□□ -0.36
TARDBP-218ENST00000617172 NFE2L2Q16236 605 aa12.79□□□□□ -0.36
TARDBP-218ENST00000617172 CLEC4GQ6UXB4 293 aa12.79□□□□□ -0.36
TARDBP-218ENST00000617172 BICDL1Q6ZP65 573 aa12.79□□□□□ -0.36
TARDBP-218ENST00000617172 SETDB2Q96T68 719 aa12.79□□□□□ -0.36
TARDBP-218ENST00000617172 UBR2Q8IWV8 1755 aa12.79□□□□□ -0.36
TARDBP-218ENST00000617172 TBC1D9BQ66K14 1250 aa12.78□□□□□ -0.36
TARDBP-218ENST00000617172 DZIP3Q86Y13 1208 aaKnown RBP12.78□□□□□ -0.36
TARDBP-218ENST00000617172 ZNF652Q9Y2D9 606 aa12.78□□□□□ -0.36
TARDBP-218ENST00000617172 CAMTA2O94983 1202 aa12.77□□□□□ -0.37
TARDBP-218ENST00000617172 PDE6BP35913 854 aa12.77□□□□□ -0.37
TARDBP-218ENST00000617172 TTLL6Q8N841 843 aa12.77□□□□□ -0.37
TARDBP-218ENST00000617172 ZNF526Q8TF50 670 aaPredicted RBP12.77□□□□□ -0.37
TARDBP-218ENST00000617172 BRIP1Q9BX63 1249 aa12.77□□□□□ -0.37
TARDBP-218ENST00000617172 CARMIL3Q8ND23 1372 aa12.77□□□□□ -0.37
TARDBP-218ENST00000617172 SENP3-EIF4A1A0A087X0R7 540 aa12.76□□□□□ -0.37
TARDBP-218ENST00000617172 NPHP1O15259 732 aa12.76□□□□□ -0.37
TARDBP-218ENST00000617172 C2CD5Q86YS7 1000 aa12.76□□□□□ -0.37
TARDBP-218ENST00000617172 MIS18AQ9NYP9 233 aa12.76□□□□□ -0.37
TARDBP-218ENST00000617172 MYBBP1AQ9BQG0 1328 aaKnown RBP12.76□□□□□ -0.37
TARDBP-218ENST00000617172 PRAMEF22A3QJZ6 481 aa12.75□□□□□ -0.37
TARDBP-218ENST00000617172 SIPA1L3O60292 1781 aaPredicted RBP12.75□□□□□ -0.37
TARDBP-218ENST00000617172 LMOD3Q0VAK6 560 aa12.75□□□□□ -0.37
TARDBP-218ENST00000617172 C9orf131Q5VYM1 1079 aa12.75□□□□□ -0.37
TARDBP-218ENST00000617172 VIRMAQ69YN4 1812 aaKnown RBP12.75□□□□□ -0.37
TARDBP-218ENST00000617172 N4BP2Q86UW6 1770 aaPredicted RBP12.74□□□□□ -0.37
TARDBP-218ENST00000617172 KIAA1551Q9HCM1 1747 aa12.74□□□□□ -0.37
TARDBP-218ENST00000617172 RIPK4P57078 832 aa12.74□□□□□ -0.37
TARDBP-218ENST00000617172 EIF4A1P60842 406 aaKnown RBP12.74□□□□□ -0.37
TARDBP-218ENST00000617172 ST5P78524 1137 aa12.74□□□□□ -0.37
TARDBP-218ENST00000617172 PRR5LQ6MZQ0 368 aa12.74□□□□□ -0.37
TARDBP-218ENST00000617172 CNBD1Q8NA66 436 aa12.74□□□□□ -0.37
TARDBP-218ENST00000617172 BABAM1Q9NWV8 329 aa12.74□□□□□ -0.37
TARDBP-218ENST00000617172 NBPF26B4DH59 902 aa12.73□□□□□ -0.37
TARDBP-218ENST00000617172 PIP4K2AP48426 406 aaPredicted RBP12.73□□□□□ -0.37
TARDBP-218ENST00000617172 NBPF10Q6P3W6 841 aaKnown RBP12.73□□□□□ -0.37
TARDBP-218ENST00000617172 TPTE2Q6XPS3 522 aa12.73□□□□□ -0.37
TARDBP-218ENST00000617172 NBPF15Q8N660 670 aa12.73□□□□□ -0.37
TARDBP-218ENST00000617172 KDM2BQ8NHM5 1336 aa12.72□□□□□ -0.37
TARDBP-218ENST00000617172 ZC3H4Q9UPT8 1303 aaKnown RBP12.72□□□□□ -0.37
TARDBP-218ENST00000617172 NBPF5PQ86XG9 351 aaPredicted RBP12.72□□□□□ -0.37
TARDBP-218ENST00000617172 ZNF622Q969S3 477 aaKnown RBP eCLIP12.72□□□□□ -0.373e-23■□□□□ 9.1
TARDBP-218ENST00000617172 RNF181Q9P0P0 153 aa12.72□□□□□ -0.37
TARDBP-218ENST00000617172 NRXN2Q9P2S2 1712 aa12.71□□□□□ -0.37
TARDBP-218ENST00000617172 ERVV-1B6SEH8 477 aa12.71□□□□□ -0.37
TARDBP-218ENST00000617172 KIF3CO14782 793 aa12.71□□□□□ -0.37
TARDBP-218ENST00000617172 TOMM70O94826 608 aa12.71□□□□□ -0.37
TARDBP-218ENST00000617172 LMNB1P20700 586 aa12.71□□□□□ -0.37
TARDBP-218ENST00000617172 TMPOP42166 694 aaKnown RBP12.71□□□□□ -0.37
TARDBP-218ENST00000617172 WDR43Q15061 677 aaKnown RBP eCLIP12.71□□□□□ -0.37
TARDBP-218ENST00000617172 CNKSR1Q969H4 720 aa12.71□□□□□ -0.37
TARDBP-218ENST00000617172 THUMPD2Q9BTF0 503 aaKnown RBP12.71□□□□□ -0.37
TARDBP-218ENST00000617172 TSPYL4Q9UJ04 414 aa12.71□□□□□ -0.37
TARDBP-218ENST00000617172 NIP7Q9Y221 180 aaKnown RBP eCLIP12.71□□□□□ -0.37
TARDBP-218ENST00000617172 ERBB4Q15303 1308 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms