RNA–Protein interactions for RNA: ENST00000617024.1

SPTSSB-204, Transcript of serine palmitoyltransferase small subunit B, humanhuman

BASIC

Gene SPTSSB, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-204ENST00000617024 SLC16A10Q8TF71 515 aa21.3■■□□□ 1
SPTSSB-204ENST00000617024 TEX13AQ9BXU3 409 aaPredicted RBP21.3■■□□□ 1
SPTSSB-204ENST00000617024 MBIPQ9NS73 344 aa21.3■■□□□ 1
SPTSSB-204ENST00000617024 ZNF521Q96K83 1311 aa21.29■■□□□ 1
SPTSSB-204ENST00000617024 HEG1Q9ULI3 1381 aa21.29■■□□□ 1
SPTSSB-204ENST00000617024 SNRPA1P09661 255 aaKnown RBP21.29■■□□□ 1
SPTSSB-204ENST00000617024 ITPK1Q13572 414 aa21.29■■□□□ 1
SPTSSB-204ENST00000617024 PELP1Q8IZL8 1130 aaKnown RBP21.29■■□□□ 1
SPTSSB-204ENST00000617024 GOLGA2Q08379 1002 aa21.28■■□□□ 1
SPTSSB-204ENST00000617024 KCPQ6ZWJ8 1503 aa21.28■■□□□ 1
SPTSSB-204ENST00000617024 YBX3P16989 372 aaKnown RBP eCLIP21.27■■□□□ 1
SPTSSB-204ENST00000617024 POLD1P28340 1107 aa21.27■■□□□ 1
SPTSSB-204ENST00000617024 DNAJC10Q8IXB1 793 aa21.27■■□□□ 1
SPTSSB-204ENST00000617024 STARD3NLO95772 234 aa21.26■□□□□ 0.99
SPTSSB-204ENST00000617024 LINC00116Q8NCU8 138 aa21.26■□□□□ 0.99
SPTSSB-204ENST00000617024 KDM3BQ7LBC6 1761 aa21.25■□□□□ 0.99
SPTSSB-204ENST00000617024 UBR2Q8IWV8 1755 aa21.25■□□□□ 0.99
SPTSSB-204ENST00000617024 MYH16Q9H6N6 1097 aa21.25■□□□□ 0.99
SPTSSB-204ENST00000617024 RC3H1Q5TC82 1133 aaKnown RBP21.24■□□□□ 0.99
SPTSSB-204ENST00000617024 TSR2Q969E8 191 aaKnown RBP21.24■□□□□ 0.99
SPTSSB-204ENST00000617024 SPINK5Q9NQ38 1064 aaPredicted RBP21.24■□□□□ 0.99
SPTSSB-204ENST00000617024 ZNF831Q5JPB2 1677 aa21.24■□□□□ 0.99
SPTSSB-204ENST00000617024 E9PSI1 815 aa21.23■□□□□ 0.99
SPTSSB-204ENST00000617024 CYP19A1P11511 503 aaPredicted RBP21.23■□□□□ 0.99
SPTSSB-204ENST00000617024 TFCP2L1Q9NZI6 479 aa21.23■□□□□ 0.99
SPTSSB-204ENST00000617024 USP16Q9Y5T5 823 aa21.23■□□□□ 0.99
SPTSSB-204ENST00000617024 PRAMEF22A3QJZ6 481 aa21.22■□□□□ 0.99
SPTSSB-204ENST00000617024 AK7Q96M32 723 aa21.22■□□□□ 0.99
SPTSSB-204ENST00000617024 CRKLP46109 303 aaKnown RBP21.21■□□□□ 0.99
SPTSSB-204ENST00000617024 SLFN5Q08AF3 891 aa21.21■□□□□ 0.99
SPTSSB-204ENST00000617024 TAF1LQ8IZX4 1826 aa21.2■□□□□ 0.98
SPTSSB-204ENST00000617024 KRT24Q2M2I5 525 aa21.2■□□□□ 0.98
SPTSSB-204ENST00000617024 DUSP27Q5VZP5 1158 aa21.2■□□□□ 0.98
SPTSSB-204ENST00000617024 CDCA7LQ96GN5 454 aa21.2■□□□□ 0.98
SPTSSB-204ENST00000617024 CCDC87Q9NVE4 849 aa21.2■□□□□ 0.98
SPTSSB-204ENST00000617024 CNTNAP4Q9C0A0 1308 aa21.2■□□□□ 0.98
SPTSSB-204ENST00000617024 FANCIQ9NVI1 1328 aa21.2■□□□□ 0.98
SPTSSB-204ENST00000617024 C5P01031 1676 aa21.19■□□□□ 0.98
SPTSSB-204ENST00000617024 INTS5Q6P9B9 1019 aaKnown RBP21.19■□□□□ 0.98
SPTSSB-204ENST00000617024 C8orf58Q8NAV2 365 aa21.19■□□□□ 0.98
SPTSSB-204ENST00000617024 ZBED9Q6R2W3 1325 aa21.19■□□□□ 0.98
SPTSSB-204ENST00000617024 ELL2O00472 640 aaPredicted RBP21.18■□□□□ 0.98
SPTSSB-204ENST00000617024 HOXB7P09629 217 aa21.18■□□□□ 0.98
SPTSSB-204ENST00000617024 EIF2S2P20042 333 aaKnown RBP21.18■□□□□ 0.98
SPTSSB-204ENST00000617024 ATP10DQ9P241 1426 aa21.18■□□□□ 0.98
SPTSSB-204ENST00000617024 TJP1Q07157 1748 aa21.18■□□□□ 0.98
SPTSSB-204ENST00000617024 GNPATO15228 680 aa21.17■□□□□ 0.98
SPTSSB-204ENST00000617024 RPS6KA4O75676 772 aa21.17■□□□□ 0.98
SPTSSB-204ENST00000617024 A1BGP04217 495 aa21.17■□□□□ 0.98
SPTSSB-204ENST00000617024 EXOSC9Q06265 439 aaKnown RBP21.17■□□□□ 0.98
SPTSSB-204ENST00000617024 COL23A1Q86Y22 540 aaPredicted RBP21.17■□□□□ 0.98
SPTSSB-204ENST00000617024 RTCBQ9Y3I0 505 aaKnown RBP21.17■□□□□ 0.98
SPTSSB-204ENST00000617024 C4BP0C0L5 1744 aa21.17■□□□□ 0.98
SPTSSB-204ENST00000617024 CICQ96RK0 1608 aaPredicted RBP21.16■□□□□ 0.98
SPTSSB-204ENST00000617024 SOS1Q07889 1333 aaPredicted RBP21.16■□□□□ 0.98
SPTSSB-204ENST00000617024 GRIN3BO60391 1043 aa21.16■□□□□ 0.98
SPTSSB-204ENST00000617024 CANXP27824 592 aaKnown RBP21.16■□□□□ 0.98
SPTSSB-204ENST00000617024 TRMT2AQ8IZ69 625 aaKnown RBP21.16■□□□□ 0.98
SPTSSB-204ENST00000617024 CHMP4AQ9BY43 222 aa21.16■□□□□ 0.98
SPTSSB-204ENST00000617024 MSL1Q68DK7 614 aa21.15■□□□□ 0.98
SPTSSB-204ENST00000617024 TSPYL6Q8N831 410 aa21.15■□□□□ 0.98
SPTSSB-204ENST00000617024 FLAD1Q8NFF5 587 aa21.15■□□□□ 0.98
SPTSSB-204ENST00000617024 COL5A3P25940 1745 aaPredicted RBP21.15■□□□□ 0.98
SPTSSB-204ENST00000617024 TWISTNBQ3B726 338 aaPredicted RBP21.14■□□□□ 0.97
SPTSSB-204ENST00000617024 TRAPPC3LQ5T215 181 aa21.14■□□□□ 0.97
SPTSSB-204ENST00000617024 NECTIN2Q92692 538 aa21.14■□□□□ 0.97
SPTSSB-204ENST00000617024 ZBTB1Q9Y2K1 713 aa21.14■□□□□ 0.97
SPTSSB-204ENST00000617024 SSFA2P28290 1259 aa21.13■□□□□ 0.97
SPTSSB-204ENST00000617024 HDGFL1Q5TGJ6 251 aa21.13■□□□□ 0.97
SPTSSB-204ENST00000617024 NPM2Q86SE8 214 aaKnown RBP21.13■□□□□ 0.97
SPTSSB-204ENST00000617024 YTHDC1Q96MU7 727 aaKnown RBP21.13■□□□□ 0.97
SPTSSB-204ENST00000617024 MYH14Q7Z406 1995 aaKnown RBP21.13■□□□□ 0.97
SPTSSB-204ENST00000617024 ADCY9O60503 1353 aa21.12■□□□□ 0.97
SPTSSB-204ENST00000617024 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.12■□□□□ 0.97
SPTSSB-204ENST00000617024 PHF14O94880 888 aa21.12■□□□□ 0.97
SPTSSB-204ENST00000617024 IL6STP40189 918 aaPredicted RBP21.12■□□□□ 0.97
SPTSSB-204ENST00000617024 ERBB4Q15303 1308 aa21.11■□□□□ 0.97
SPTSSB-204ENST00000617024 MSH5O43196 834 aa21.11■□□□□ 0.97
SPTSSB-204ENST00000617024 VAMP4O75379 141 aa21.11■□□□□ 0.97
SPTSSB-204ENST00000617024 ADRA2BP18089 450 aa21.11■□□□□ 0.97
SPTSSB-204ENST00000617024 PIP4K2AP48426 406 aaPredicted RBP21.11■□□□□ 0.97
SPTSSB-204ENST00000617024 SMIM5Q71RC9 77 aa21.11■□□□□ 0.97
SPTSSB-204ENST00000617024 NBPF26B4DH59 902 aa21.1■□□□□ 0.97
SPTSSB-204ENST00000617024 EIF5P55010 431 aaKnown RBP21.1■□□□□ 0.97
SPTSSB-204ENST00000617024 CCDC30Q5VVM6 783 aa21.1■□□□□ 0.97
SPTSSB-204ENST00000617024 NBPF10Q6P3W6 841 aaKnown RBP21.1■□□□□ 0.97
SPTSSB-204ENST00000617024 AMIGO3Q86WK7 504 aa21.1■□□□□ 0.97
SPTSSB-204ENST00000617024 NBPF15Q8N660 670 aa21.1■□□□□ 0.97
SPTSSB-204ENST00000617024 ARHGEF1Q92888 912 aaKnown RBP21.1■□□□□ 0.97
SPTSSB-204ENST00000617024 A0A087WZG4 1122 aa21.09■□□□□ 0.97
SPTSSB-204ENST00000617024 MYL6BP14649 208 aa21.09■□□□□ 0.97
SPTSSB-204ENST00000617024 RFC4P35249 363 aa21.09■□□□□ 0.97
SPTSSB-204ENST00000617024 DBF4Q9UBU7 674 aaPredicted RBP21.09■□□□□ 0.97
SPTSSB-204ENST00000617024 ZNF330Q9Y3S2 320 aaPredicted RBP21.09■□□□□ 0.97
SPTSSB-204ENST00000617024 DDX21Q9NR30 783 aaKnown RBP eCLIP21.08■□□□□ 0.97
SPTSSB-204ENST00000617024 LAMB4A4D0S4 1761 aa21.08■□□□□ 0.96
SPTSSB-204ENST00000617024 PDIA6Q15084 440 aa21.07■□□□□ 0.96
SPTSSB-204ENST00000617024 CHPF2Q9P2E5 772 aa21.07■□□□□ 0.96
SPTSSB-204ENST00000617024 UBR3Q6ZT12 1888 aa21.07■□□□□ 0.96
SPTSSB-204ENST00000617024 STK31Q9BXU1 1019 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms