RNA–Protein interactions for RNA: ENST00000616856.1

TULP4-206, Transcript of tubby like protein 4, humanhuman

TSL 2

Gene TULP4, Length 2,307 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TULP4-206ENST00000616856 CCDC30Q5VVM6 783 aa15.22■□□□□ 0.03
TULP4-206ENST00000616856 DCTPP1Q9H773 170 aa15.22■□□□□ 0.03
TULP4-206ENST00000616856 PTPRCP08575 1304 aa15.22■□□□□ 0.03
TULP4-206ENST00000616856 CABP4P57796 275 aa15.22■□□□□ 0.03
TULP4-206ENST00000616856 HSCBQ8IWL3 235 aa15.22■□□□□ 0.03
TULP4-206ENST00000616856 ANKRD44Q8N8A2 993 aa15.22■□□□□ 0.03
TULP4-206ENST00000616856 C8orf37Q96NL8 207 aa15.22■□□□□ 0.03
TULP4-206ENST00000616856 NRAPQ86VF7 1730 aa15.22■□□□□ 0.03
TULP4-206ENST00000616856 APBB1O00213 710 aa15.21■□□□□ 0.03
TULP4-206ENST00000616856 PLEKHM2Q8IWE5 1019 aa15.21■□□□□ 0.03
TULP4-206ENST00000616856 CHMP5Q9NZZ3 219 aa15.21■□□□□ 0.03
TULP4-206ENST00000616856 ZNF790Q6PG37 636 aa15.21■□□□□ 0.02
TULP4-206ENST00000616856 SLC4A10Q6U841 1118 aa15.21■□□□□ 0.02
TULP4-206ENST00000616856 KIF2CQ99661 725 aa15.21■□□□□ 0.02
TULP4-206ENST00000616856 CCDC9Q9Y3X0 531 aaKnown RBP15.21■□□□□ 0.02
TULP4-206ENST00000616856 SOS1Q07889 1333 aaPredicted RBP15.2■□□□□ 0.02
TULP4-206ENST00000616856 SMARCA5O60264 1052 aaPredicted RBP15.2■□□□□ 0.02
TULP4-206ENST00000616856 HSPA1LP34931 641 aa15.2■□□□□ 0.02
TULP4-206ENST00000616856 SNX21Q969T3 373 aa15.2■□□□□ 0.02
TULP4-206ENST00000616856 MRC1P22897 1456 aa15.2■□□□□ 0.02
TULP4-206ENST00000616856 PRAMEF22A3QJZ6 481 aa15.2■□□□□ 0.02
TULP4-206ENST00000616856 DISP2A7MBM2 1401 aa15.2■□□□□ 0.02
TULP4-206ENST00000616856 NGLY1Q96IV0 654 aa15.2■□□□□ 0.02
TULP4-206ENST00000616856 SLIT2O94813 1529 aa15.19■□□□□ 0.02
TULP4-206ENST00000616856 SPATA31A1Q5TZJ5 1347 aa15.19■□□□□ 0.02
TULP4-206ENST00000616856 GIGYF1O75420 1035 aaPredicted RBP15.18■□□□□ 0.02
TULP4-206ENST00000616856 RPAP2Q8IXW5 612 aaPredicted RBP15.18■□□□□ 0.02
TULP4-206ENST00000616856 CD2BP2O95400 341 aaKnown RBP15.18■□□□□ 0.02
TULP4-206ENST00000616856 HOXB7P09629 217 aa15.18■□□□□ 0.02
TULP4-206ENST00000616856 TTC5Q8N0Z6 440 aa15.18■□□□□ 0.02
TULP4-206ENST00000616856 NWD2Q9ULI1 1742 aa15.18■□□□□ 0.02
TULP4-206ENST00000616856 FLIIQ13045 1269 aa15.17■□□□□ 0.02
TULP4-206ENST00000616856 NKX1-1Q15270 411 aaPredicted RBP15.17■□□□□ 0.02
TULP4-206ENST00000616856 CHPF2Q9P2E5 772 aa15.17■□□□□ 0.02
TULP4-206ENST00000616856 FKBP5Q13451 457 aaPredicted RBP15.17■□□□□ 0.02
TULP4-206ENST00000616856 RBM42Q9BTD8 480 aaKnown RBP15.17■□□□□ 0.02
TULP4-206ENST00000616856 WNK3Q9BYP7 1800 aa15.16■□□□□ 0.02
TULP4-206ENST00000616856 HEG1Q9ULI3 1381 aa15.16■□□□□ 0.02
TULP4-206ENST00000616856 ERVV-2B6SEH9 535 aa15.16■□□□□ 0.02
TULP4-206ENST00000616856 EXOC5O00471 708 aa15.16■□□□□ 0.02
TULP4-206ENST00000616856 ANXA1P04083 346 aa15.16■□□□□ 0.02
TULP4-206ENST00000616856 ZNF496Q96IT1 587 aaPredicted RBP15.16■□□□□ 0.02
TULP4-206ENST00000616856 PHAXQ9H814 394 aaKnown RBP15.16■□□□□ 0.02
TULP4-206ENST00000616856 LRP6O75581 1613 aa15.16■□□□□ 0.02
TULP4-206ENST00000616856 TTC22Q5TAA0 569 aa15.16■□□□□ 0.02
TULP4-206ENST00000616856 UNC5CLQ8IV45 518 aa15.16■□□□□ 0.02
TULP4-206ENST00000616856 IL27Q8NEV9 243 aa15.16■□□□□ 0.02
TULP4-206ENST00000616856 SPATA31A5Q5VU36 1347 aa15.16■□□□□ 0.02
TULP4-206ENST00000616856 SPATA31A6Q5VVP1 1343 aa15.16■□□□□ 0.02
TULP4-206ENST00000616856 SPATA31A7Q8IWB4 1347 aa15.16■□□□□ 0.02
TULP4-206ENST00000616856 CDC45O75419 566 aa15.15■□□□□ 0.02
TULP4-206ENST00000616856 TOGARAM1Q9Y4F4 1720 aa15.15■□□□□ 0.02
TULP4-206ENST00000616856 THRAP3Q9Y2W1 955 aaKnown RBP15.15■□□□□ 0.02
TULP4-206ENST00000616856 CACNA1FO60840 1977 aa15.15■□□□□ 0.02
TULP4-206ENST00000616856 MCM4P33991 863 aa15.14■□□□□ 0.01
TULP4-206ENST00000616856 C5P01031 1676 aa15.14■□□□□ 0.01
TULP4-206ENST00000616856 KAT6BQ8WYB5 2073 aa15.13■□□□□ 0.01
TULP4-206ENST00000616856 TNS2Q63HR2 1409 aa15.13■□□□□ 0.01
TULP4-206ENST00000616856 BCL9LQ86UU0 1499 aa15.13■□□□□ 0.01
TULP4-206ENST00000616856 DDB1Q16531 1140 aa15.13■□□□□ 0.01
TULP4-206ENST00000616856 MEX3CQ5U5Q3 659 aaKnown RBP15.13■□□□□ 0.01
TULP4-206ENST00000616856 FMNL2Q96PY5 1086 aa15.13■□□□□ 0.01
TULP4-206ENST00000616856 CHMP4AQ9BY43 222 aa15.13■□□□□ 0.01
TULP4-206ENST00000616856 TMOD3Q9NYL9 352 aa15.13■□□□□ 0.01
TULP4-206ENST00000616856 BRPF3Q9ULD4 1205 aa15.13■□□□□ 0.01
TULP4-206ENST00000616856 CIZ1Q9ULV3 898 aaPredicted RBP15.13■□□□□ 0.01
TULP4-206ENST00000616856 PROSER3Q2NL68 480 aa15.12■□□□□ 0.01
TULP4-206ENST00000616856 CDCA7Q9BWT1 371 aaPredicted RBP15.12■□□□□ 0.01
TULP4-206ENST00000616856 DBF4Q9UBU7 674 aaPredicted RBP15.12■□□□□ 0.01
TULP4-206ENST00000616856 DDIT3P35638 169 aa15.12■□□□□ 0.01
TULP4-206ENST00000616856 CCT4P50991 539 aaKnown RBP15.12■□□□□ 0.01
TULP4-206ENST00000616856 PKNOX2Q96KN3 472 aa15.12■□□□□ 0.01
TULP4-206ENST00000616856 SDSP20132 328 aa15.11■□□□□ 0.01
TULP4-206ENST00000616856 USP21Q9UK80 565 aa15.11■□□□□ 0.01
TULP4-206ENST00000616856 EXOC6BQ9Y2D4 811 aa15.11■□□□□ 0.01
TULP4-206ENST00000616856 PNMA6EA0A0J9YXQ4 647 aa15.11■□□□□ 0.01
TULP4-206ENST00000616856 PTCD1O75127 700 aaKnown RBP15.11■□□□□ 0.01
TULP4-206ENST00000616856 HMMRO75330 724 aa15.11■□□□□ 0.01
TULP4-206ENST00000616856 SNRPA1P09661 255 aaKnown RBP15.11■□□□□ 0.01
TULP4-206ENST00000616856 FAM98CQ17RN3 349 aaKnown RBP15.11■□□□□ 0.01
TULP4-206ENST00000616856 L1TD1Q5T7N2 865 aaKnown RBP15.11■□□□□ 0.01
TULP4-206ENST00000616856 TSHZ3Q63HK5 1081 aa15.11■□□□□ 0.01
TULP4-206ENST00000616856 FNBP4Q8N3X1 1017 aaPredicted RBP15.11■□□□□ 0.01
TULP4-206ENST00000616856 SYTL4Q96C24 671 aaPredicted RBP15.1■□□□□ 0.01
TULP4-206ENST00000616856 FOXD4L1Q9NU39 408 aa15.1■□□□□ 0.01
TULP4-206ENST00000616856 USP16Q9Y5T5 823 aa15.1■□□□□ 0.01
TULP4-206ENST00000616856 DDX11L8A8MPP1 907 aa15.1■□□□□ 0.01
TULP4-206ENST00000616856 VPS72Q15906 364 aa15.1■□□□□ 0.01
TULP4-206ENST00000616856 PIGBQ92521 554 aa15.1■□□□□ 0.01
TULP4-206ENST00000616856 A0A0G2JS52 829 aa15.09■□□□□ 0.01
TULP4-206ENST00000616856 MYL6BP14649 208 aa15.09■□□□□ 0.01
TULP4-206ENST00000616856 PIP4K2AP48426 406 aaPredicted RBP15.09■□□□□ 0.01
TULP4-206ENST00000616856 BARGINQ6ZT62 677 aa15.09■□□□□ 0.01
TULP4-206ENST00000616856 GNAI2P04899 355 aa15.09■□□□□ 0.01
TULP4-206ENST00000616856 ITGB4P16144 1822 aa15.08■□□□□ 0.01
TULP4-206ENST00000616856 PAPPAQ13219 1627 aa15.08■□□□□ 0
TULP4-206ENST00000616856 CASC1Q6TDU7 716 aa15.08■□□□□ 0
TULP4-206ENST00000616856 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.08■□□□□ 0
TULP4-206ENST00000616856 GLI3P10071 1580 aa15.08■□□□□ 0
TULP4-206ENST00000616856 PI4KAP2A4QPH2 592 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms