RNA–Protein interactions for RNA: ENST00000616760.1

CLIC1-210, Transcript of chloride intracellular channel 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIC1, Length 1,098 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1-210ENST00000616760 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.55□□□□□ -0.24
CLIC1-210ENST00000616760 SLC4A5Q9BY07 1137 aa13.55□□□□□ -0.24
CLIC1-210ENST00000616760 SLC12A5Q9H2X9 1139 aa13.55□□□□□ -0.24
CLIC1-210ENST00000616760 MYOM1P52179 1685 aa13.55□□□□□ -0.24
CLIC1-210ENST00000616760 USP47Q96K76 1375 aa13.55□□□□□ -0.24
CLIC1-210ENST00000616760 PPP1R3GB7ZBB8 358 aa13.54□□□□□ -0.24
CLIC1-210ENST00000616760 ARHGEF25Q86VW2 580 aa13.54□□□□□ -0.24
CLIC1-210ENST00000616760 ZBED2Q9BTP6 218 aa13.54□□□□□ -0.24
CLIC1-210ENST00000616760 CARD10Q9BWT7 1032 aa13.54□□□□□ -0.24
CLIC1-210ENST00000616760 TNS2Q63HR2 1409 aa13.54□□□□□ -0.24
CLIC1-210ENST00000616760 EDC4Q6P2E9 1401 aaKnown RBP13.54□□□□□ -0.24
CLIC1-210ENST00000616760 TMF1P82094 1093 aa13.53□□□□□ -0.24
CLIC1-210ENST00000616760 VPS9D1Q9Y2B5 631 aa13.53□□□□□ -0.24
CLIC1-210ENST00000616760 USP31Q70CQ4 1352 aa13.53□□□□□ -0.24
CLIC1-210ENST00000616760 CD163L1Q9NR16 1453 aa13.53□□□□□ -0.24
CLIC1-210ENST00000616760 FAM208AQ9UK61 1670 aaKnown RBP13.53□□□□□ -0.24
CLIC1-210ENST00000616760 CHD4Q14839 1912 aa13.52□□□□□ -0.24
CLIC1-210ENST00000616760 EXOC5O00471 708 aa13.52□□□□□ -0.25
CLIC1-210ENST00000616760 MAP3K7O43318 606 aa13.52□□□□□ -0.25
CLIC1-210ENST00000616760 COL9A1P20849 921 aa13.52□□□□□ -0.25
CLIC1-210ENST00000616760 OSBPP22059 807 aa13.52□□□□□ -0.25
CLIC1-210ENST00000616760 CDCA8Q53HL2 280 aa13.52□□□□□ -0.25
CLIC1-210ENST00000616760 MARCH10Q8NA82 808 aaPredicted RBP13.52□□□□□ -0.25
CLIC1-210ENST00000616760 A0A1W2PP64 1363 aa13.52□□□□□ -0.25
CLIC1-210ENST00000616760 BTAF1O14981 1849 aa13.51□□□□□ -0.25
CLIC1-210ENST00000616760 HRO43593 1189 aa13.51□□□□□ -0.25
CLIC1-210ENST00000616760 PRIM1P49642 420 aaKnown RBP13.51□□□□□ -0.25
CLIC1-210ENST00000616760 NME9Q86XW9 330 aa13.51□□□□□ -0.25
CLIC1-210ENST00000616760 STK32BQ9NY57 414 aa13.51□□□□□ -0.25
CLIC1-210ENST00000616760 KAT6BQ8WYB5 2073 aa13.51□□□□□ -0.25
CLIC1-210ENST00000616760 MLLT3P42568 568 aaPredicted RBP13.5□□□□□ -0.25
CLIC1-210ENST00000616760 TXNRD1Q16881 649 aa13.49□□□□□ -0.25
CLIC1-210ENST00000616760 TSR1Q2NL82 804 aaKnown RBP13.49□□□□□ -0.25
CLIC1-210ENST00000616760 QSER1Q2KHR3 1735 aa13.48□□□□□ -0.25
CLIC1-210ENST00000616760 ANKRD36BQ8N2N9 1353 aa13.47□□□□□ -0.25
CLIC1-210ENST00000616760 PAPPAQ13219 1627 aa13.47□□□□□ -0.25
CLIC1-210ENST00000616760 SEMA3EO15041 775 aa13.47□□□□□ -0.25
CLIC1-210ENST00000616760 ZBTB7AO95365 584 aa13.47□□□□□ -0.25
CLIC1-210ENST00000616760 SLC15A2Q16348 729 aa13.47□□□□□ -0.25
CLIC1-210ENST00000616760 PTF1AQ7RTS3 328 aa13.47□□□□□ -0.25
CLIC1-210ENST00000616760 RNF166Q96A37 237 aaPredicted RBP13.46□□□□□ -0.25
CLIC1-210ENST00000616760 COG3Q96JB2 828 aa13.46□□□□□ -0.25
CLIC1-210ENST00000616760 MTFR1LQ9H019 292 aa13.46□□□□□ -0.25
CLIC1-210ENST00000616760 IL2RBP14784 551 aa13.44□□□□□ -0.26
CLIC1-210ENST00000616760 PROX2Q3B8N5 592 aa13.44□□□□□ -0.26
CLIC1-210ENST00000616760 NLRP2Q9NX02 1062 aa13.44□□□□□ -0.26
CLIC1-210ENST00000616760 BHMG1C9JSJ3 638 aaPredicted RBP13.43□□□□□ -0.26
CLIC1-210ENST00000616760 PDGFDQ9GZP0 370 aaPredicted RBP13.43□□□□□ -0.26
CLIC1-210ENST00000616760 EIF4G2P78344 907 aaKnown RBP eCLIP13.41□□□□□ -0.261e-7■■■■■ 36.9
CLIC1-210ENST00000616760 ANKRD24Q8TF21 1146 aa13.41□□□□□ -0.26
CLIC1-210ENST00000616760 SYT17Q9BSW7 474 aa13.41□□□□□ -0.26
CLIC1-210ENST00000616760 FHDC1Q9C0D6 1143 aaPredicted RBP13.41□□□□□ -0.26
CLIC1-210ENST00000616760 MAP3K5Q99683 1374 aa13.41□□□□□ -0.26
CLIC1-210ENST00000616760 COL24A1Q17RW2 1714 aa13.41□□□□□ -0.26
CLIC1-210ENST00000616760 DOT1LQ8TEK3 1739 aa13.41□□□□□ -0.26
CLIC1-210ENST00000616760 LY75O60449 1722 aa13.4□□□□□ -0.26
CLIC1-210ENST00000616760 ZNF784Q8NCA9 323 aaPredicted RBP13.4□□□□□ -0.26
CLIC1-210ENST00000616760 IP6K1Q92551 441 aa13.4□□□□□ -0.26
CLIC1-210ENST00000616760 ACSBG1Q96GR2 724 aa13.4□□□□□ -0.26
CLIC1-210ENST00000616760 CDHR5Q9HBB8 845 aa13.4□□□□□ -0.26
CLIC1-210ENST00000616760 RABGEF1Q9UJ41 708 aa13.4□□□□□ -0.26
CLIC1-210ENST00000616760 TUBGCP6Q96RT7 1819 aa13.4□□□□□ -0.26
CLIC1-210ENST00000616760 TESPA1A2RU30 521 aaPredicted RBP13.39□□□□□ -0.27
CLIC1-210ENST00000616760 AMPHP49418 695 aa13.39□□□□□ -0.27
CLIC1-210ENST00000616760 ARXQ96QS3 562 aa13.39□□□□□ -0.27
CLIC1-210ENST00000616760 FYB1O15117 783 aa13.38□□□□□ -0.27
CLIC1-210ENST00000616760 SLC27A3Q5K4L6 730 aa13.38□□□□□ -0.27
CLIC1-210ENST00000616760 GGNBP2Q9H3C7 697 aa13.38□□□□□ -0.27
CLIC1-210ENST00000616760 MAP3K19Q56UN5 1328 aa13.38□□□□□ -0.27
CLIC1-210ENST00000616760 RGPD2P0DJD1 1756 aa13.37□□□□□ -0.27
CLIC1-210ENST00000616760 RTL1A6NKG5 1358 aa13.37□□□□□ -0.27
CLIC1-210ENST00000616760 SHANK3Q9BYB0 1731 aa13.37□□□□□ -0.27
CLIC1-210ENST00000616760 SENP3-EIF4A1A0A087X0R7 540 aa13.37□□□□□ -0.27
CLIC1-210ENST00000616760 TRIM6-TRIM34B2RNG4 842 aa13.37□□□□□ -0.27
CLIC1-210ENST00000616760 CENPBP07199 599 aaPredicted RBP13.37□□□□□ -0.27
CLIC1-210ENST00000616760 SLC16A10Q8TF71 515 aa13.37□□□□□ -0.27
CLIC1-210ENST00000616760 LTV1Q96GA3 475 aaPredicted RBP13.37□□□□□ -0.27
CLIC1-210ENST00000616760 POLR3GLQ9BT43 218 aa13.37□□□□□ -0.27
CLIC1-210ENST00000616760 NBPF3Q9H094 633 aa13.37□□□□□ -0.27
CLIC1-210ENST00000616760 HOXC9P31274 260 aa13.36□□□□□ -0.27
CLIC1-210ENST00000616760 NSD3Q9BZ95 1437 aa13.36□□□□□ -0.27
CLIC1-210ENST00000616760 HSPA5P11021 654 aaKnown RBP13.35□□□□□ -0.27
CLIC1-210ENST00000616760 POLD1P28340 1107 aa13.35□□□□□ -0.27
CLIC1-210ENST00000616760 C1QTNF8P60827 252 aa13.35□□□□□ -0.27
CLIC1-210ENST00000616760 IFFO2Q5TF58 517 aa13.35□□□□□ -0.27
CLIC1-210ENST00000616760 MRPL50Q8N5N7 158 aaKnown RBP13.35□□□□□ -0.27
CLIC1-210ENST00000616760 KIAA1468Q9P260 1216 aa13.35□□□□□ -0.27
CLIC1-210ENST00000616760 KIF20BQ96Q89 1820 aa13.34□□□□□ -0.27
CLIC1-210ENST00000616760 SMG6Q86US8 1419 aaKnown RBP13.34□□□□□ -0.27
CLIC1-210ENST00000616760 ZNF827Q17R98 1081 aa13.34□□□□□ -0.27
CLIC1-210ENST00000616760 CARD14Q9BXL6 1004 aa13.34□□□□□ -0.27
CLIC1-210ENST00000616760 NPDC1Q9NQX5 325 aaPredicted RBP13.34□□□□□ -0.27
CLIC1-210ENST00000616760 CGNL1Q0VF96 1302 aa13.34□□□□□ -0.27
CLIC1-210ENST00000616760 FBLN1P23142 703 aa13.33□□□□□ -0.28
CLIC1-210ENST00000616760 PRSS12P56730 875 aa13.33□□□□□ -0.28
CLIC1-210ENST00000616760 RRS1Q15050 365 aaKnown RBP13.33□□□□□ -0.28
CLIC1-210ENST00000616760 SMYD5Q6GMV2 418 aa13.33□□□□□ -0.28
CLIC1-210ENST00000616760 DDX54Q8TDD1 881 aaKnown RBP13.33□□□□□ -0.28
CLIC1-210ENST00000616760 CDCA7LQ96GN5 454 aa13.33□□□□□ -0.28
CLIC1-210ENST00000616760 LRRC4BQ9NT99 713 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms