RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 DDB1Q16531 1140 aa18.86■□□□□ 0.61
NOP56-220ENST00000616692 CABP2Q9NPB3 220 aa18.86■□□□□ 0.61
NOP56-220ENST00000616692 CCDC7Q96M83 1385 aa18.85■□□□□ 0.61
NOP56-220ENST00000616692 CABP1Q9NZU7 370 aa18.85■□□□□ 0.61
NOP56-220ENST00000616692 TNNT3P45378 269 aaPredicted RBP18.84■□□□□ 0.61
NOP56-220ENST00000616692 PLCB2Q00722 1185 aa18.84■□□□□ 0.61
NOP56-220ENST00000616692 ARHGEF25Q86VW2 580 aa18.84■□□□□ 0.61
NOP56-220ENST00000616692 FEZ2Q9UHY8 353 aaPredicted RBP18.84■□□□□ 0.61
NOP56-220ENST00000616692 SBNO2Q9Y2G9 1366 aa18.84■□□□□ 0.61
NOP56-220ENST00000616692 MFAP1P55081 439 aaKnown RBP18.84■□□□□ 0.61
NOP56-220ENST00000616692 MCM4P33991 863 aa18.83■□□□□ 0.61
NOP56-220ENST00000616692 NBPF10Q6P3W6 841 aaKnown RBP18.83■□□□□ 0.61
NOP56-220ENST00000616692 TRAK2O60296 914 aa18.83■□□□□ 0.6
NOP56-220ENST00000616692 HS1BP3Q53T59 392 aa18.83■□□□□ 0.6
NOP56-220ENST00000616692 TTC21BQ7Z4L5 1316 aa18.82■□□□□ 0.6
NOP56-220ENST00000616692 USP31Q70CQ4 1352 aa18.82■□□□□ 0.6
NOP56-220ENST00000616692 TOM1L2Q6ZVM7 507 aa18.82■□□□□ 0.6
NOP56-220ENST00000616692 NFAT5O94916 1531 aa18.82■□□□□ 0.6
NOP56-220ENST00000616692 SPDYE4A6NLX3 237 aa18.81■□□□□ 0.6
NOP56-220ENST00000616692 MYRIPQ8NFW9 859 aa18.81■□□□□ 0.6
NOP56-220ENST00000616692 CWC22Q9HCG8 908 aaKnown RBP18.81■□□□□ 0.6
NOP56-220ENST00000616692 KIF16BQ96L93 1317 aa18.81■□□□□ 0.6
NOP56-220ENST00000616692 SGSM3Q96HU1 749 aa18.81■□□□□ 0.6
NOP56-220ENST00000616692 NOP2P46087 812 aaKnown RBP18.8■□□□□ 0.6
NOP56-220ENST00000616692 OTUD6BQ8N6M0 293 aa18.8■□□□□ 0.6
NOP56-220ENST00000616692 PPP1R1BQ9UD71 204 aaPredicted RBP18.8■□□□□ 0.6
NOP56-220ENST00000616692 ANTXR1Q9H6X2 564 aa18.79■□□□□ 0.6
NOP56-220ENST00000616692 TERF2IPQ9NYB0 399 aa18.79■□□□□ 0.6
NOP56-220ENST00000616692 MON2Q7Z3U7 1717 aa18.78■□□□□ 0.6
NOP56-220ENST00000616692 NOL7Q9UMY1 257 aaKnown RBP18.78■□□□□ 0.6
NOP56-220ENST00000616692 CTR9Q6PD62 1173 aa18.78■□□□□ 0.6
NOP56-220ENST00000616692 PANK3Q9H999 370 aa18.78■□□□□ 0.6
NOP56-220ENST00000616692 TNS2Q63HR2 1409 aa18.78■□□□□ 0.6
NOP56-220ENST00000616692 SLKQ9H2G2 1235 aaPredicted RBP18.77■□□□□ 0.6
NOP56-220ENST00000616692 YY1P25490 414 aa18.77■□□□□ 0.6
NOP56-220ENST00000616692 FAM161AQ3B820 660 aa18.77■□□□□ 0.6
NOP56-220ENST00000616692 MARCH10Q8NA82 808 aaPredicted RBP18.77■□□□□ 0.6
NOP56-220ENST00000616692 NHSQ6T4R5 1651 aa18.77■□□□□ 0.6
NOP56-220ENST00000616692 SSR1P43307 286 aaKnown RBP18.77■□□□□ 0.59
NOP56-220ENST00000616692 NBPF6Q5VWK0 638 aa18.77■□□□□ 0.59
NOP56-220ENST00000616692 NBPF5PQ86XG9 351 aaPredicted RBP18.77■□□□□ 0.59
NOP56-220ENST00000616692 NBPF4Q96M43 638 aa18.77■□□□□ 0.59
NOP56-220ENST00000616692 L3MBTL2Q969R5 705 aa18.76■□□□□ 0.59
NOP56-220ENST00000616692 DONSONQ9NYP3 566 aa18.76■□□□□ 0.59
NOP56-220ENST00000616692 SLFN14P0C7P3 912 aa18.76■□□□□ 0.59
NOP56-220ENST00000616692 EXOC5O00471 708 aa18.75■□□□□ 0.59
NOP56-220ENST00000616692 EXOC6Q8TAG9 804 aa18.75■□□□□ 0.59
NOP56-220ENST00000616692 BRMS1Q9HCU9 246 aa18.75■□□□□ 0.59
NOP56-220ENST00000616692 STK32BQ9NY57 414 aa18.75■□□□□ 0.59
NOP56-220ENST00000616692 AXIN2Q9Y2T1 843 aa18.75■□□□□ 0.59
NOP56-220ENST00000616692 ZBTB12Q9Y330 459 aaPredicted RBP18.74■□□□□ 0.59
NOP56-220ENST00000616692 FAM9BQ8IZU0 186 aa18.74■□□□□ 0.59
NOP56-220ENST00000616692 FEZ1Q99689 392 aa18.74■□□□□ 0.59
NOP56-220ENST00000616692 RBM28Q9NW13 759 aaKnown RBP18.74■□□□□ 0.59
NOP56-220ENST00000616692 ROCK2O75116 1388 aaKnown RBP18.74■□□□□ 0.59
NOP56-220ENST00000616692 KTN1Q86UP2 1357 aaKnown RBP18.74■□□□□ 0.59
NOP56-220ENST00000616692 GTF2F1P35269 517 aaKnown RBP eCLIP18.73■□□□□ 0.598e-9■□□□□ 9.7
NOP56-220ENST00000616692 ICE2Q659A1 982 aa18.73■□□□□ 0.59
NOP56-220ENST00000616692 RSPH14Q9UHP6 348 aa18.73■□□□□ 0.59
NOP56-220ENST00000616692 MAP3K5Q99683 1374 aa18.73■□□□□ 0.59
NOP56-220ENST00000616692 C8orf34Q49A92 452 aa18.73■□□□□ 0.59
NOP56-220ENST00000616692 BSDC1Q9NW68 430 aaPredicted RBP18.73■□□□□ 0.59
NOP56-220ENST00000616692 DHX16O60231 1041 aaKnown RBP18.72■□□□□ 0.59
NOP56-220ENST00000616692 ARID4AP29374 1257 aaPredicted RBP18.72■□□□□ 0.59
NOP56-220ENST00000616692 ZKSCAN8Q15776 578 aaPredicted RBP18.72■□□□□ 0.59
NOP56-220ENST00000616692 PROM2Q8N271 834 aa18.72■□□□□ 0.59
NOP56-220ENST00000616692 PDCL2Q8N4E4 241 aa18.72■□□□□ 0.59
NOP56-220ENST00000616692 TXNRD1Q16881 649 aa18.71■□□□□ 0.59
NOP56-220ENST00000616692 UPF2Q9HAU5 1272 aaKnown RBP18.71■□□□□ 0.59
NOP56-220ENST00000616692 RGPD5Q99666 1765 aa18.7■□□□□ 0.58
NOP56-220ENST00000616692 CSB-PGBD3P0DP91 1061 aa18.7■□□□□ 0.58
NOP56-220ENST00000616692 OGFRQ9NZT2 677 aa18.7■□□□□ 0.58
NOP56-220ENST00000616692 PAPPAQ13219 1627 aa18.7■□□□□ 0.58
NOP56-220ENST00000616692 KIF1CO43896 1103 aaKnown RBP18.7■□□□□ 0.58
NOP56-220ENST00000616692 MCM5P33992 734 aa18.7■□□□□ 0.58
NOP56-220ENST00000616692 SLC15A2Q16348 729 aa18.7■□□□□ 0.58
NOP56-220ENST00000616692 GAS2L3Q86XJ1 694 aa18.7■□□□□ 0.58
NOP56-220ENST00000616692 BORCS6Q96GS4 357 aa18.7■□□□□ 0.58
NOP56-220ENST00000616692 FAM208AQ9UK61 1670 aaKnown RBP18.7■□□□□ 0.58
NOP56-220ENST00000616692 ZBTB7CA1YPR0 619 aa18.69■□□□□ 0.58
NOP56-220ENST00000616692 GUCY2CP25092 1073 aa18.69■□□□□ 0.58
NOP56-220ENST00000616692 CCDC184Q52MB2 194 aa18.69■□□□□ 0.58
NOP56-220ENST00000616692 SPINK5Q9NQ38 1064 aaPredicted RBP18.69■□□□□ 0.58
NOP56-220ENST00000616692 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.69■□□□□ 0.58
NOP56-220ENST00000616692 TDO2P48775 406 aa18.69■□□□□ 0.58
NOP56-220ENST00000616692 MTFR1LQ9H019 292 aa18.69■□□□□ 0.58
NOP56-220ENST00000616692 QSER1Q2KHR3 1735 aa18.69■□□□□ 0.58
NOP56-220ENST00000616692 ZNF853P0CG23 659 aa18.68■□□□□ 0.58
NOP56-220ENST00000616692 PTGER2P43116 358 aa18.68■□□□□ 0.58
NOP56-220ENST00000616692 CASC1Q6TDU7 716 aa18.68■□□□□ 0.58
NOP56-220ENST00000616692 ZNF513Q8N8E2 541 aaPredicted RBP18.68■□□□□ 0.58
NOP56-220ENST00000616692 CALR3Q96L12 384 aaKnown RBP18.68■□□□□ 0.58
NOP56-220ENST00000616692 PRIMPOLQ96LW4 560 aa18.68■□□□□ 0.58
NOP56-220ENST00000616692 EDC4Q6P2E9 1401 aaKnown RBP18.68■□□□□ 0.58
NOP56-220ENST00000616692 MYOM1P52179 1685 aa18.67■□□□□ 0.58
NOP56-220ENST00000616692 NASPP49321 788 aaPredicted RBP18.67■□□□□ 0.58
NOP56-220ENST00000616692 HMGN5P82970 282 aaKnown RBP18.67■□□□□ 0.58
NOP56-220ENST00000616692 ERBB3P21860 1342 aa18.66■□□□□ 0.58
NOP56-220ENST00000616692 U2AF2P26368 475 aaKnown RBP eCLIP18.66■□□□□ 0.586e-6■□□□□ 8.6
NOP56-220ENST00000616692 RRP1P56182 461 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms