RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 GJB2P29033 226 aa15.74■□□□□ 0.11
MSH6-214ENST00000616033 DHX37Q8IY37 1157 aaKnown RBP15.74■□□□□ 0.11
MSH6-214ENST00000616033 SYTL4Q96C24 671 aaPredicted RBP15.74■□□□□ 0.11
MSH6-214ENST00000616033 CUL4AQ13619 759 aa15.74■□□□□ 0.11
MSH6-214ENST00000616033 TPD52L1Q16890 204 aaPredicted RBP15.74■□□□□ 0.11
MSH6-214ENST00000616033 RIMS2Q9UQ26 1411 aa15.73■□□□□ 0.11
MSH6-214ENST00000616033 UBE2HP62256 183 aa15.73■□□□□ 0.11
MSH6-214ENST00000616033 KLHL34Q8N239 644 aa15.73■□□□□ 0.11
MSH6-214ENST00000616033 A0A087WWV3 80 aa15.73■□□□□ 0.11
MSH6-214ENST00000616033 EIF2S2P20042 333 aaKnown RBP15.73■□□□□ 0.11
MSH6-214ENST00000616033 TRMT1Q9NXH9 659 aaKnown RBP15.73■□□□□ 0.11
MSH6-214ENST00000616033 FAM135BQ49AJ0 1406 aa15.72■□□□□ 0.11
MSH6-214ENST00000616033 ATP10DQ9P241 1426 aa15.72■□□□□ 0.11
MSH6-214ENST00000616033 GOLGA6L6A8MZA4 724 aa15.72■□□□□ 0.11
MSH6-214ENST00000616033 TNNT1P13805 278 aa15.72■□□□□ 0.11
MSH6-214ENST00000616033 HSP90AB2PQ58FF8 381 aa15.72■□□□□ 0.11
MSH6-214ENST00000616033 KIAA1524Q8TCG1 905 aa15.72■□□□□ 0.11
MSH6-214ENST00000616033 RIMBP3CA6NJZ7 1639 aa15.72■□□□□ 0.11
MSH6-214ENST00000616033 RIMBP3BA6NNM3 1639 aa15.72■□□□□ 0.11
MSH6-214ENST00000616033 RIMBP3Q9UFD9 1639 aa15.72■□□□□ 0.11
MSH6-214ENST00000616033 RPGRIP1LQ68CZ1 1315 aa15.72■□□□□ 0.11
MSH6-214ENST00000616033 F13A1P00488 732 aa15.72■□□□□ 0.11
MSH6-214ENST00000616033 LTV1Q96GA3 475 aaPredicted RBP15.72■□□□□ 0.11
MSH6-214ENST00000616033 JAKMIP1Q96N16 626 aaKnown RBP15.72■□□□□ 0.11
MSH6-214ENST00000616033 COL3A1P02461 1466 aaPredicted RBP15.72■□□□□ 0.11
MSH6-214ENST00000616033 VWDEQ8N2E2 1590 aa15.72■□□□□ 0.11
MSH6-214ENST00000616033 PRPF40BQ6NWY9 871 aaKnown RBP15.71■□□□□ 0.11
MSH6-214ENST00000616033 SLC26A8Q96RN1 970 aa15.71■□□□□ 0.11
MSH6-214ENST00000616033 CCDC192P0DO97 292 aa15.71■□□□□ 0.11
MSH6-214ENST00000616033 UVSSAQ2YD98 709 aa15.71■□□□□ 0.11
MSH6-214ENST00000616033 PIK3R4Q99570 1358 aa15.71■□□□□ 0.1
MSH6-214ENST00000616033 DEPDC5O75140 1603 aa15.71■□□□□ 0.1
MSH6-214ENST00000616033 RUFY3Q7L099 469 aa15.7■□□□□ 0.1
MSH6-214ENST00000616033 INTS4Q96HW7 963 aaKnown RBP15.7■□□□□ 0.1
MSH6-214ENST00000616033 LIG1P18858 919 aa15.7■□□□□ 0.1
MSH6-214ENST00000616033 ANO6Q4KMQ2 910 aa15.69■□□□□ 0.1
MSH6-214ENST00000616033 FILIP1Q7Z7B0 1213 aa15.69■□□□□ 0.1
MSH6-214ENST00000616033 TMX1Q9H3N1 280 aa15.69■□□□□ 0.1
MSH6-214ENST00000616033 SNX14Q9Y5W7 946 aa15.69■□□□□ 0.1
MSH6-214ENST00000616033 BICD2Q8TD16 824 aa15.69■□□□□ 0.1
MSH6-214ENST00000616033 YTHDC2Q9H6S0 1430 aaKnown RBP15.69■□□□□ 0.1
MSH6-214ENST00000616033 LARP1BQ659C4 914 aaKnown RBP15.69■□□□□ 0.1
MSH6-214ENST00000616033 LIMCH1Q9UPQ0 1083 aa15.69■□□□□ 0.1
MSH6-214ENST00000616033 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.69■□□□□ 0.1
MSH6-214ENST00000616033 KIAA1210Q9ULL0 1709 aa15.69■□□□□ 0.1
MSH6-214ENST00000616033 ARID5BQ14865 1188 aa15.68■□□□□ 0.1
MSH6-214ENST00000616033 ADCK5Q3MIX3 580 aa15.68■□□□□ 0.1
MSH6-214ENST00000616033 GTPBP4Q9BZE4 634 aaKnown RBP15.68■□□□□ 0.1
MSH6-214ENST00000616033 TNMDQ9H2S6 317 aa15.68■□□□□ 0.1
MSH6-214ENST00000616033 ADGRB1O14514 1584 aa15.68■□□□□ 0.1
MSH6-214ENST00000616033 DIP2CQ9Y2E4 1556 aa15.68■□□□□ 0.1
MSH6-214ENST00000616033 ANXA1P04083 346 aa15.68■□□□□ 0.1
MSH6-214ENST00000616033 EIF4A2Q14240 407 aaKnown RBP15.68■□□□□ 0.1
MSH6-214ENST00000616033 UTP14CQ5TAP6 766 aaKnown RBP15.68■□□□□ 0.1
MSH6-214ENST00000616033 CCDC112Q8NEF3 446 aa15.68■□□□□ 0.1
MSH6-214ENST00000616033 DACT1Q9NYF0 836 aa15.68■□□□□ 0.1
MSH6-214ENST00000616033 UBTFL1P0CB47 393 aaPredicted RBP15.68■□□□□ 0.1
MSH6-214ENST00000616033 NUP62CLQ9H1M0 184 aa15.68■□□□□ 0.1
MSH6-214ENST00000616033 CCDC9Q9Y3X0 531 aaKnown RBP15.68■□□□□ 0.1
MSH6-214ENST00000616033 GLI2P10070 1586 aa15.67■□□□□ 0.1
MSH6-214ENST00000616033 DNAJC25Q9H1X3 360 aa15.67■□□□□ 0.1
MSH6-214ENST00000616033 ATP6V1DQ9Y5K8 247 aa15.67■□□□□ 0.1
MSH6-214ENST00000616033 KNDC1Q76NI1 1749 aa15.67■□□□□ 0.1
MSH6-214ENST00000616033 NCBP1Q09161 790 aaKnown RBP15.67■□□□□ 0.1
MSH6-214ENST00000616033 NUTM2GQ5VZR2 741 aa15.67■□□□□ 0.1
MSH6-214ENST00000616033 ERCC4Q92889 916 aaPredicted RBP15.67■□□□□ 0.1
MSH6-214ENST00000616033 RBM33Q96EV2 1170 aaKnown RBP15.67■□□□□ 0.1
MSH6-214ENST00000616033 DDX11Q96FC9 970 aa15.67■□□□□ 0.1
MSH6-214ENST00000616033 TRIM34Q9BYJ4 488 aa15.67■□□□□ 0.1
MSH6-214ENST00000616033 RPAP1Q9BWH6 1393 aaPredicted RBP15.67■□□□□ 0.1
MSH6-214ENST00000616033 SRGAP3O43295 1099 aa15.66■□□□□ 0.1
MSH6-214ENST00000616033 FLIIQ13045 1269 aa15.66■□□□□ 0.1
MSH6-214ENST00000616033 PDRG1Q9NUG6 133 aa15.66■□□□□ 0.1
MSH6-214ENST00000616033 ARHGEF40Q8TER5 1519 aa15.66■□□□□ 0.1
MSH6-214ENST00000616033 CCT4P50991 539 aaKnown RBP15.66■□□□□ 0.1
MSH6-214ENST00000616033 TYRO3Q06418 890 aa15.66■□□□□ 0.1
MSH6-214ENST00000616033 MAP3K11Q16584 847 aa15.66■□□□□ 0.1
MSH6-214ENST00000616033 PNPLA6Q8IY17 1366 aa15.66■□□□□ 0.1
MSH6-214ENST00000616033 CHL1O00533 1208 aa15.66■□□□□ 0.1
MSH6-214ENST00000616033 LETM1O95202 739 aaPredicted RBP15.66■□□□□ 0.1
MSH6-214ENST00000616033 ST7Q9NRC1 585 aa15.66■□□□□ 0.1
MSH6-214ENST00000616033 HAP1P54257 671 aaPredicted RBP15.65■□□□□ 0.1
MSH6-214ENST00000616033 SPTLC3Q9NUV7 552 aa15.65■□□□□ 0.1
MSH6-214ENST00000616033 COL9A3Q14050 684 aaPredicted RBP15.65■□□□□ 0.1
MSH6-214ENST00000616033 PPP1R42Q7Z4L9 355 aa15.65■□□□□ 0.1
MSH6-214ENST00000616033 TTC6Q86TZ1 520 aa15.65■□□□□ 0.1
MSH6-214ENST00000616033 CAMSAP1Q5T5Y3 1602 aa15.65■□□□□ 0.1
MSH6-214ENST00000616033 HSPA4P34932 840 aa15.65■□□□□ 0.1
MSH6-214ENST00000616033 GORABQ5T7V8 394 aa15.65■□□□□ 0.1
MSH6-214ENST00000616033 CDC37L1Q7L3B6 337 aa15.65■□□□□ 0.1
MSH6-214ENST00000616033 PTH1RQ03431 593 aa15.64■□□□□ 0.09
MSH6-214ENST00000616033 CLIP2Q9UDT6 1046 aa15.64■□□□□ 0.09
MSH6-214ENST00000616033 PTPRCP08575 1304 aa15.64■□□□□ 0.09
MSH6-214ENST00000616033 TNNT3P45378 269 aaPredicted RBP15.64■□□□□ 0.09
MSH6-214ENST00000616033 ANAPC15P60006 121 aa15.64■□□□□ 0.09
MSH6-214ENST00000616033 PHAXQ9H814 394 aaKnown RBP15.64■□□□□ 0.09
MSH6-214ENST00000616033 KIF20AO95235 890 aa15.64■□□□□ 0.09
MSH6-214ENST00000616033 NUDT16Q96DE0 195 aaKnown RBP15.64■□□□□ 0.09
MSH6-214ENST00000616033 CBX8Q9HC52 389 aa15.64■□□□□ 0.09
MSH6-214ENST00000616033 RGS12O14924 1447 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms