RNA–Protein interactions for RNA: ENST00000616030.4

LINC00649-217, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 714 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-217ENST00000616030 COL15A1P39059 1388 aa13.82□□□□□ -0.2
LINC00649-217ENST00000616030 KCNA4P22459 653 aa13.81□□□□□ -0.2
LINC00649-217ENST00000616030 TTC5Q8N0Z6 440 aa13.81□□□□□ -0.2
LINC00649-217ENST00000616030 ZNF496Q96IT1 587 aaPredicted RBP13.81□□□□□ -0.2
LINC00649-217ENST00000616030 TEX13AQ9BXU3 409 aaPredicted RBP13.81□□□□□ -0.2
LINC00649-217ENST00000616030 BCORQ6W2J9 1755 aa13.81□□□□□ -0.2
LINC00649-217ENST00000616030 RFC4P35249 363 aa13.8□□□□□ -0.2
LINC00649-217ENST00000616030 RTF1Q92541 710 aaKnown RBP13.8□□□□□ -0.2
LINC00649-217ENST00000616030 FMNL2Q96PY5 1086 aa13.8□□□□□ -0.2
LINC00649-217ENST00000616030 ZBTB1Q9Y2K1 713 aa13.8□□□□□ -0.2
LINC00649-217ENST00000616030 MMP10P09238 476 aa13.79□□□□□ -0.2
LINC00649-217ENST00000616030 NFE2L2Q16236 605 aa13.79□□□□□ -0.2
LINC00649-217ENST00000616030 PXDNLA1KZ92 1463 aa13.79□□□□□ -0.2
LINC00649-217ENST00000616030 BTBD11A6QL63 1104 aa13.78□□□□□ -0.2
LINC00649-217ENST00000616030 STARD3NLO95772 234 aa13.78□□□□□ -0.2
LINC00649-217ENST00000616030 EIF5P55010 431 aaKnown RBP13.78□□□□□ -0.2
LINC00649-217ENST00000616030 MCM10Q7L590 875 aa13.78□□□□□ -0.2
LINC00649-217ENST00000616030 NEFMP07197 916 aa13.77□□□□□ -0.21
LINC00649-217ENST00000616030 AFDNP55196 1824 aaKnown RBP13.77□□□□□ -0.21
LINC00649-217ENST00000616030 NARFQ9UHQ1 456 aa13.77□□□□□ -0.21
LINC00649-217ENST00000616030 TM4SF1P30408 202 aa13.76□□□□□ -0.21
LINC00649-217ENST00000616030 IL6STP40189 918 aaPredicted RBP13.76□□□□□ -0.21
LINC00649-217ENST00000616030 TAF7Q15545 349 aaPredicted RBP13.76□□□□□ -0.21
LINC00649-217ENST00000616030 MRS2Q9HD23 443 aa13.76□□□□□ -0.21
LINC00649-217ENST00000616030 DLEC1Q9Y238 1755 aa13.76□□□□□ -0.21
LINC00649-217ENST00000616030 MAPK8IP3Q9UPT6 1336 aa13.75□□□□□ -0.21
LINC00649-217ENST00000616030 RGL2O15211 777 aa13.75□□□□□ -0.21
LINC00649-217ENST00000616030 KCNQ3O43525 872 aa13.75□□□□□ -0.21
LINC00649-217ENST00000616030 YBX3P16989 372 aaKnown RBP eCLIP13.75□□□□□ -0.212e-6■□□□□ 9.6
LINC00649-217ENST00000616030 YY1P25490 414 aa13.75□□□□□ -0.21
LINC00649-217ENST00000616030 TGFB2P61812 414 aa13.75□□□□□ -0.21
LINC00649-217ENST00000616030 DCTN1Q14203 1278 aa13.75□□□□□ -0.21
LINC00649-217ENST00000616030 FKBP8Q14318 412 aa13.75□□□□□ -0.21
LINC00649-217ENST00000616030 PNISRQ8TF01 805 aaKnown RBP13.75□□□□□ -0.21
LINC00649-217ENST00000616030 BCL2L12Q9HB09 334 aa13.75□□□□□ -0.21
LINC00649-217ENST00000616030 SRP68Q9UHB9 627 aaKnown RBP13.75□□□□□ -0.21
LINC00649-217ENST00000616030 ARFGEF1Q9Y6D6 1849 aa13.75□□□□□ -0.21
LINC00649-217ENST00000616030 N4BP2Q86UW6 1770 aaPredicted RBP13.75□□□□□ -0.21
LINC00649-217ENST00000616030 POLRMTO00411 1230 aaKnown RBP13.74□□□□□ -0.21
LINC00649-217ENST00000616030 GRIN3BO60391 1043 aa13.74□□□□□ -0.21
LINC00649-217ENST00000616030 SNRPA1P09661 255 aaKnown RBP13.74□□□□□ -0.21
LINC00649-217ENST00000616030 DDR1Q08345 913 aa13.74□□□□□ -0.21
LINC00649-217ENST00000616030 BABAM1Q9NWV8 329 aa13.74□□□□□ -0.21
LINC00649-217ENST00000616030 A0A087WZG4 1122 aa13.73□□□□□ -0.21
LINC00649-217ENST00000616030 ZPR1O75312 459 aa13.73□□□□□ -0.21
LINC00649-217ENST00000616030 GPR162Q16538 588 aa13.73□□□□□ -0.21
LINC00649-217ENST00000616030 USPL1Q5W0Q7 1092 aa13.73□□□□□ -0.21
LINC00649-217ENST00000616030 KLHL34Q8N239 644 aa13.73□□□□□ -0.21
LINC00649-217ENST00000616030 PARP3Q9Y6F1 533 aa13.73□□□□□ -0.21
LINC00649-217ENST00000616030 TMPOP42166 694 aaKnown RBP13.72□□□□□ -0.21
LINC00649-217ENST00000616030 LMOD3Q0VAK6 560 aa13.71□□□□□ -0.21
LINC00649-217ENST00000616030 PPP4R3CPQ6ZMV5 832 aa13.71□□□□□ -0.21
LINC00649-217ENST00000616030 USP16Q9Y5T5 823 aa13.71□□□□□ -0.21
LINC00649-217ENST00000616030 ADCY9O60503 1353 aa13.71□□□□□ -0.22
LINC00649-217ENST00000616030 CANXP27824 592 aaKnown RBP13.7□□□□□ -0.22
LINC00649-217ENST00000616030 EIF4A1P60842 406 aaKnown RBP13.7□□□□□ -0.22
LINC00649-217ENST00000616030 NFIXQ14938 502 aa13.7□□□□□ -0.22
LINC00649-217ENST00000616030 CCDC184Q52MB2 194 aa13.7□□□□□ -0.22
LINC00649-217ENST00000616030 RUNDC1Q96C34 613 aa13.7□□□□□ -0.22
LINC00649-217ENST00000616030 ANKRD31Q8N7Z5 1873 aa13.7□□□□□ -0.22
LINC00649-217ENST00000616030 PRAMEF22A3QJZ6 481 aa13.69□□□□□ -0.22
LINC00649-217ENST00000616030 GIGYF1O75420 1035 aaPredicted RBP13.69□□□□□ -0.22
LINC00649-217ENST00000616030 CAMTA2O94983 1202 aa13.69□□□□□ -0.22
LINC00649-217ENST00000616030 A1BGP04217 495 aa13.69□□□□□ -0.22
LINC00649-217ENST00000616030 KCNA3P22001 575 aa13.69□□□□□ -0.22
LINC00649-217ENST00000616030 CARMIL3Q8ND23 1372 aa13.69□□□□□ -0.22
LINC00649-217ENST00000616030 ERBB4Q15303 1308 aa13.68□□□□□ -0.22
LINC00649-217ENST00000616030 RIPK4P57078 832 aa13.68□□□□□ -0.22
LINC00649-217ENST00000616030 WDR43Q15061 677 aaKnown RBP eCLIP13.68□□□□□ -0.22
LINC00649-217ENST00000616030 CLEC4GQ6UXB4 293 aa13.68□□□□□ -0.22
LINC00649-217ENST00000616030 ADAMTS8Q9UP79 889 aa13.68□□□□□ -0.22
LINC00649-217ENST00000616030 NBPF26B4DH59 902 aa13.67□□□□□ -0.22
LINC00649-217ENST00000616030 NBPF10Q6P3W6 841 aaKnown RBP13.67□□□□□ -0.22
LINC00649-217ENST00000616030 NBPF15Q8N660 670 aa13.67□□□□□ -0.22
LINC00649-217ENST00000616030 THUMPD2Q9BTF0 503 aaKnown RBP13.67□□□□□ -0.22
LINC00649-217ENST00000616030 ARFGEF2Q9Y6D5 1785 aa13.66□□□□□ -0.22
LINC00649-217ENST00000616030 ZNF784Q8NCA9 323 aaPredicted RBP13.66□□□□□ -0.22
LINC00649-217ENST00000616030 TRIM35Q9UPQ4 493 aa13.66□□□□□ -0.22
LINC00649-217ENST00000616030 COL11A2P13942 1736 aaPredicted RBP13.66□□□□□ -0.22
LINC00649-217ENST00000616030 SERPINB2P05120 415 aa13.65□□□□□ -0.22
LINC00649-217ENST00000616030 DPEP1P16444 411 aa13.65□□□□□ -0.22
LINC00649-217ENST00000616030 TBC1D9BQ66K14 1250 aa13.65□□□□□ -0.22
LINC00649-217ENST00000616030 DZIP3Q86Y13 1208 aaKnown RBP13.65□□□□□ -0.22
LINC00649-217ENST00000616030 YTHDC1Q96MU7 727 aaKnown RBP13.65□□□□□ -0.22
LINC00649-217ENST00000616030 MIS18AQ9NYP9 233 aa13.65□□□□□ -0.22
LINC00649-217ENST00000616030 ATP10DQ9P241 1426 aa13.64□□□□□ -0.23
LINC00649-217ENST00000616030 A0A0G2JLW4 131 aa13.64□□□□□ -0.23
LINC00649-217ENST00000616030 CHL1O00533 1208 aa13.64□□□□□ -0.23
LINC00649-217ENST00000616030 LRP10Q7Z4F1 713 aa13.64□□□□□ -0.23
LINC00649-217ENST00000616030 PELP1Q8IZL8 1130 aaKnown RBP13.64□□□□□ -0.23
LINC00649-217ENST00000616030 FAM9BQ8IZU0 186 aa13.64□□□□□ -0.23
LINC00649-217ENST00000616030 TSPYL4Q9UJ04 414 aa13.64□□□□□ -0.23
LINC00649-217ENST00000616030 PDZRN3Q9UPQ7 1066 aa13.64□□□□□ -0.23
LINC00649-217ENST00000616030 TBC1D2BQ9UPU7 963 aa13.64□□□□□ -0.23
LINC00649-217ENST00000616030 NUP98P52948 1817 aa13.64□□□□□ -0.23
LINC00649-217ENST00000616030 RIC1Q4ADV7 1423 aa13.64□□□□□ -0.23
LINC00649-217ENST00000616030 IBTKQ9P2D0 1353 aaPredicted RBP13.63□□□□□ -0.23
LINC00649-217ENST00000616030 NCBP3Q53F19 620 aaKnown RBP13.63□□□□□ -0.23
LINC00649-217ENST00000616030 CCDC146Q8IYE0 955 aa13.63□□□□□ -0.23
LINC00649-217ENST00000616030 PIM2Q9P1W9 311 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms