RNA–Protein interactions for RNA: ENST00000616002.1

RABGAP1-213, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene RABGAP1, Length 1,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-213ENST00000616002 AMIGO3Q86WK7 504 aa14.14□□□□□ -0.15
RABGAP1-213ENST00000616002 EMILIN1Q9Y6C2 1016 aa14.14□□□□□ -0.15
RABGAP1-213ENST00000616002 ADCY9O60503 1353 aa14.14□□□□□ -0.15
RABGAP1-213ENST00000616002 UBR3Q6ZT12 1888 aa14.14□□□□□ -0.15
RABGAP1-213ENST00000616002 PKD1L3Q7Z443 1732 aa14.13□□□□□ -0.15
RABGAP1-213ENST00000616002 CEP350Q5VT06 3117 aa14.13□□□□□ -0.15
RABGAP1-213ENST00000616002 LOC102724428A0A0B4J2F2 783 aa14.13□□□□□ -0.15
RABGAP1-213ENST00000616002 SIK1P57059 783 aa14.13□□□□□ -0.15
RABGAP1-213ENST00000616002 PDE3AQ14432 1141 aa14.13□□□□□ -0.15
RABGAP1-213ENST00000616002 NKX1-1Q15270 411 aaPredicted RBP14.13□□□□□ -0.15
RABGAP1-213ENST00000616002 SMIM5Q71RC9 77 aa14.13□□□□□ -0.15
RABGAP1-213ENST00000616002 TMOD3Q9NYL9 352 aa14.13□□□□□ -0.15
RABGAP1-213ENST00000616002 HSPA6P17066 643 aa14.12□□□□□ -0.15
RABGAP1-213ENST00000616002 BRPF1P55201 1214 aaPredicted RBP14.12□□□□□ -0.15
RABGAP1-213ENST00000616002 SALL2Q9Y467 1007 aaPredicted RBP14.12□□□□□ -0.15
RABGAP1-213ENST00000616002 E9PSI1 815 aa14.11□□□□□ -0.15
RABGAP1-213ENST00000616002 GNPATO15228 680 aa14.11□□□□□ -0.15
RABGAP1-213ENST00000616002 LINC00116Q8NCU8 138 aa14.11□□□□□ -0.15
RABGAP1-213ENST00000616002 MAPK8IP3Q9UPT6 1336 aa14.11□□□□□ -0.15
RABGAP1-213ENST00000616002 ATP6V1AP38606 617 aa14.1□□□□□ -0.15
RABGAP1-213ENST00000616002 C20orf194Q5TEA3 1177 aa14.1□□□□□ -0.15
RABGAP1-213ENST00000616002 IL27Q8NEV9 243 aa14.1□□□□□ -0.15
RABGAP1-213ENST00000616002 CARD14Q9BXL6 1004 aa14.1□□□□□ -0.15
RABGAP1-213ENST00000616002 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.1□□□□□ -0.15
RABGAP1-213ENST00000616002 NCAPD2Q15021 1401 aa14.1□□□□□ -0.15
RABGAP1-213ENST00000616002 ASAP1Q9ULH1 1129 aa14.09□□□□□ -0.15
RABGAP1-213ENST00000616002 MAP2P11137 1827 aaKnown RBP14.09□□□□□ -0.15
RABGAP1-213ENST00000616002 IFNL2Q8IZJ0 200 aa14.09□□□□□ -0.15
RABGAP1-213ENST00000616002 EYA1Q99502 592 aa14.09□□□□□ -0.15
RABGAP1-213ENST00000616002 MMP10P09238 476 aa14.08□□□□□ -0.16
RABGAP1-213ENST00000616002 ITPK1Q13572 414 aa14.08□□□□□ -0.16
RABGAP1-213ENST00000616002 PHKG2P15735 406 aa14.07□□□□□ -0.16
RABGAP1-213ENST00000616002 ANKRD26Q9UPS8 1709 aa14.07□□□□□ -0.16
RABGAP1-213ENST00000616002 TRAPPC3LQ5T215 181 aa14.05□□□□□ -0.16
RABGAP1-213ENST00000616002 ATG3Q9NT62 314 aa14.05□□□□□ -0.16
RABGAP1-213ENST00000616002 RTCBQ9Y3I0 505 aaKnown RBP14.05□□□□□ -0.16
RABGAP1-213ENST00000616002 KIF3CO14782 793 aa14.05□□□□□ -0.16
RABGAP1-213ENST00000616002 TGFB2P61812 414 aa14.05□□□□□ -0.16
RABGAP1-213ENST00000616002 BECN1Q14457 450 aa14.05□□□□□ -0.16
RABGAP1-213ENST00000616002 NLGN1Q8N2Q7 840 aa14.05□□□□□ -0.16
RABGAP1-213ENST00000616002 PXDNLA1KZ92 1463 aa14.04□□□□□ -0.16
RABGAP1-213ENST00000616002 SPOCK2Q92563 424 aa14.04□□□□□ -0.16
RABGAP1-213ENST00000616002 FRAT1Q92837 279 aaPredicted RBP14.04□□□□□ -0.16
RABGAP1-213ENST00000616002 CICQ96RK0 1608 aaPredicted RBP14.04□□□□□ -0.16
RABGAP1-213ENST00000616002 POLKQ9UBT6 870 aa14.04□□□□□ -0.16
RABGAP1-213ENST00000616002 BCS1LQ9Y276 419 aa14.04□□□□□ -0.16
RABGAP1-213ENST00000616002 FAM43AQ8N2R8 423 aa14.03□□□□□ -0.16
RABGAP1-213ENST00000616002 RBM42Q9BTD8 480 aaKnown RBP14.03□□□□□ -0.16
RABGAP1-213ENST00000616002 A0A0G2JLW4 131 aa14.02□□□□□ -0.16
RABGAP1-213ENST00000616002 TNNT2P45379 298 aaPredicted RBP14.02□□□□□ -0.16
RABGAP1-213ENST00000616002 EIF4A2Q14240 407 aaKnown RBP14.02□□□□□ -0.16
RABGAP1-213ENST00000616002 KDRP35968 1356 aa14.01□□□□□ -0.17
RABGAP1-213ENST00000616002 PLEKHG2Q9H7P9 1386 aa14.01□□□□□ -0.17
RABGAP1-213ENST00000616002 KIF13BQ9NQT8 1826 aa14.01□□□□□ -0.17
RABGAP1-213ENST00000616002 N4BP2Q86UW6 1770 aaPredicted RBP14.01□□□□□ -0.17
RABGAP1-213ENST00000616002 ERVV-2B6SEH9 535 aa14.01□□□□□ -0.17
RABGAP1-213ENST00000616002 RFC4P35249 363 aa14.01□□□□□ -0.17
RABGAP1-213ENST00000616002 APLP1P51693 650 aa14.01□□□□□ -0.17
RABGAP1-213ENST00000616002 ARHGAP27Q6ZUM4 889 aa14.01□□□□□ -0.17
RABGAP1-213ENST00000616002 CCDC87Q9NVE4 849 aa14.01□□□□□ -0.17
RABGAP1-213ENST00000616002 TOMM70O94826 608 aa14□□□□□ -0.17
RABGAP1-213ENST00000616002 HSP90AB1P08238 724 aaKnown RBP14□□□□□ -0.17
RABGAP1-213ENST00000616002 RC3H1Q5TC82 1133 aaKnown RBP14□□□□□ -0.17
RABGAP1-213ENST00000616002 ARHGEF1Q92888 912 aaKnown RBP14□□□□□ -0.17
RABGAP1-213ENST00000616002 DCAF5Q96JK2 942 aa14□□□□□ -0.17
RABGAP1-213ENST00000616002 PARP3Q9Y6F1 533 aa14□□□□□ -0.17
RABGAP1-213ENST00000616002 C10orf71Q711Q0 1435 aa14□□□□□ -0.17
RABGAP1-213ENST00000616002 FCHSD2O94868 740 aa14□□□□□ -0.17
RABGAP1-213ENST00000616002 SLC4A9Q96Q91 983 aa14□□□□□ -0.17
RABGAP1-213ENST00000616002 CNTNAP4Q9C0A0 1308 aa13.99□□□□□ -0.17
RABGAP1-213ENST00000616002 KIAA1551Q9HCM1 1747 aa13.99□□□□□ -0.17
RABGAP1-213ENST00000616002 RPS6KA4O75676 772 aa13.99□□□□□ -0.17
RABGAP1-213ENST00000616002 GYS1P13807 737 aa13.99□□□□□ -0.17
RABGAP1-213ENST00000616002 DPEP1P16444 411 aa13.99□□□□□ -0.17
RABGAP1-213ENST00000616002 CABP4P57796 275 aa13.99□□□□□ -0.17
RABGAP1-213ENST00000616002 ZNF831Q5JPB2 1677 aa13.99□□□□□ -0.17
RABGAP1-213ENST00000616002 PLEKHO1Q53GL0 409 aaPredicted RBP13.98□□□□□ -0.17
RABGAP1-213ENST00000616002 CLUAP1Q96AJ1 413 aa13.98□□□□□ -0.17
RABGAP1-213ENST00000616002 RSPH6AQ9H0K4 717 aa13.98□□□□□ -0.17
RABGAP1-213ENST00000616002 C4AP0C0L4 1744 aa13.98□□□□□ -0.17
RABGAP1-213ENST00000616002 CCDC27Q2M243 656 aa13.97□□□□□ -0.17
RABGAP1-213ENST00000616002 L1TD1Q5T7N2 865 aaKnown RBP13.97□□□□□ -0.17
RABGAP1-213ENST00000616002 ZNF530Q6P9A1 599 aaPredicted RBP13.97□□□□□ -0.17
RABGAP1-213ENST00000616002 NMRK2Q9NPI5 230 aa13.97□□□□□ -0.17
RABGAP1-213ENST00000616002 COL5A3P25940 1745 aaPredicted RBP13.97□□□□□ -0.17
RABGAP1-213ENST00000616002 APAF1O14727 1248 aa13.96□□□□□ -0.17
RABGAP1-213ENST00000616002 AMOTQ4VCS5 1084 aa13.96□□□□□ -0.17
RABGAP1-213ENST00000616002 WDR63Q8IWG1 891 aa13.96□□□□□ -0.17
RABGAP1-213ENST00000616002 BRPF3Q9ULD4 1205 aa13.96□□□□□ -0.17
RABGAP1-213ENST00000616002 PTCD1O75127 700 aaKnown RBP13.96□□□□□ -0.18
RABGAP1-213ENST00000616002 FRAT2O75474 233 aaPredicted RBP13.96□□□□□ -0.18
RABGAP1-213ENST00000616002 MTHFSP49914 203 aa13.96□□□□□ -0.18
RABGAP1-213ENST00000616002 PIM2Q9P1W9 311 aa13.96□□□□□ -0.18
RABGAP1-213ENST00000616002 KDM6AO15550 1401 aaPredicted RBP13.95□□□□□ -0.18
RABGAP1-213ENST00000616002 CT47B1P0C2W7 299 aaPredicted RBP13.95□□□□□ -0.18
RABGAP1-213ENST00000616002 C1orf141Q5JVX7 400 aa13.95□□□□□ -0.18
RABGAP1-213ENST00000616002 C9orf131Q5VYM1 1079 aa13.95□□□□□ -0.18
RABGAP1-213ENST00000616002 SKAP1Q86WV1 359 aa13.95□□□□□ -0.18
RABGAP1-213ENST00000616002 C16orf71Q8IYS4 520 aaPredicted RBP13.95□□□□□ -0.18
RABGAP1-213ENST00000616002 BRCA1P38398 1863 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms