RNA–Protein interactions for RNA: ENST00000615520.1

LHX9-208, Transcript of LIM homeobox 9, humanhuman

Gene LHX9, Length 1,051 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX9-208ENST00000615520 HMGB2P26583 209 aaKnown RBP23.49■■□□□ 1.35
LHX9-208ENST00000615520 USP16Q9Y5T5 823 aa23.49■■□□□ 1.35
LHX9-208ENST00000615520 TUBGCP6Q96RT7 1819 aa23.48■■□□□ 1.35
LHX9-208ENST00000615520 CYP19A1P11511 503 aaPredicted RBP23.48■■□□□ 1.35
LHX9-208ENST00000615520 CRKLP46109 303 aaKnown RBP23.48■■□□□ 1.35
LHX9-208ENST00000615520 TWISTNBQ3B726 338 aaPredicted RBP23.48■■□□□ 1.35
LHX9-208ENST00000615520 NBPF14Q5TI25 921 aa23.48■■□□□ 1.35
LHX9-208ENST00000615520 STK32BQ9NY57 414 aa23.48■■□□□ 1.35
LHX9-208ENST00000615520 MYH14Q7Z406 1995 aaKnown RBP23.48■■□□□ 1.35
LHX9-208ENST00000615520 TSPYL6Q8N831 410 aa23.47■■□□□ 1.35
LHX9-208ENST00000615520 CCDC87Q9NVE4 849 aa23.47■■□□□ 1.35
LHX9-208ENST00000615520 ZNF330Q9Y3S2 320 aaPredicted RBP23.47■■□□□ 1.35
LHX9-208ENST00000615520 GNPATO15228 680 aa23.46■■□□□ 1.35
LHX9-208ENST00000615520 CANXP27824 592 aaKnown RBP23.46■■□□□ 1.35
LHX9-208ENST00000615520 HDGFL1Q5TGJ6 251 aa23.46■■□□□ 1.35
LHX9-208ENST00000615520 UBR3Q6ZT12 1888 aa23.45■■□□□ 1.35
LHX9-208ENST00000615520 CNTNAP4Q9C0A0 1308 aa23.45■■□□□ 1.34
LHX9-208ENST00000615520 PIP4K2AP48426 406 aaPredicted RBP23.45■■□□□ 1.34
LHX9-208ENST00000615520 ANO8Q9HCE9 1232 aaPredicted RBP23.45■■□□□ 1.34
LHX9-208ENST00000615520 A1BGP04217 495 aa23.44■■□□□ 1.34
LHX9-208ENST00000615520 HOXB7P09629 217 aa23.44■■□□□ 1.34
LHX9-208ENST00000615520 ZNF827Q17R98 1081 aa23.44■■□□□ 1.34
LHX9-208ENST00000615520 TFCP2L1Q9NZI6 479 aa23.44■■□□□ 1.34
LHX9-208ENST00000615520 PHF14O94880 888 aa23.43■■□□□ 1.34
LHX9-208ENST00000615520 ZBTB1Q9Y2K1 713 aa23.43■■□□□ 1.34
LHX9-208ENST00000615520 NPM2Q86SE8 214 aaKnown RBP23.42■■□□□ 1.34
LHX9-208ENST00000615520 TRMT2AQ8IZ69 625 aaKnown RBP23.42■■□□□ 1.34
LHX9-208ENST00000615520 SOS1Q07889 1333 aaPredicted RBP23.41■■□□□ 1.34
LHX9-208ENST00000615520 TCERG1O14776 1098 aaKnown RBP23.41■■□□□ 1.34
LHX9-208ENST00000615520 MSH5O43196 834 aa23.41■■□□□ 1.34
LHX9-208ENST00000615520 MYL6BP14649 208 aa23.41■■□□□ 1.34
LHX9-208ENST00000615520 SLC15A2Q16348 729 aa23.41■■□□□ 1.34
LHX9-208ENST00000615520 RC3H1Q5TC82 1133 aaKnown RBP23.41■■□□□ 1.34
LHX9-208ENST00000615520 INTS5Q6P9B9 1019 aaKnown RBP23.41■■□□□ 1.34
LHX9-208ENST00000615520 AKT1S1Q96B36 256 aa23.41■■□□□ 1.34
LHX9-208ENST00000615520 RTCBQ9Y3I0 505 aaKnown RBP23.41■■□□□ 1.34
LHX9-208ENST00000615520 QSER1Q2KHR3 1735 aa23.4■■□□□ 1.34
LHX9-208ENST00000615520 CCDC30Q5VVM6 783 aa23.4■■□□□ 1.34
LHX9-208ENST00000615520 SMIM5Q71RC9 77 aa23.4■■□□□ 1.34
LHX9-208ENST00000615520 ARXQ96QS3 562 aa23.4■■□□□ 1.34
LHX9-208ENST00000615520 STK31Q9BXU1 1019 aa23.39■■□□□ 1.33
LHX9-208ENST00000615520 CHMP4AQ9BY43 222 aa23.39■■□□□ 1.33
LHX9-208ENST00000615520 CHPF2Q9P2E5 772 aa23.39■■□□□ 1.33
LHX9-208ENST00000615520 VAMP4O75379 141 aa23.38■■□□□ 1.33
LHX9-208ENST00000615520 RPS6KA4O75676 772 aa23.38■■□□□ 1.33
LHX9-208ENST00000615520 ANXA1P04083 346 aa23.38■■□□□ 1.33
LHX9-208ENST00000615520 C4AP0C0L4 1744 aa23.38■■□□□ 1.33
LHX9-208ENST00000615520 R3HDM1Q15032 1099 aaKnown RBP23.37■■□□□ 1.33
LHX9-208ENST00000615520 ERBB4Q15303 1308 aa23.36■■□□□ 1.33
LHX9-208ENST00000615520 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.36■■□□□ 1.33
LHX9-208ENST00000615520 PSDA5PKW4 1024 aaPredicted RBP23.36■■□□□ 1.33
LHX9-208ENST00000615520 NBPF26B4DH59 902 aa23.36■■□□□ 1.33
LHX9-208ENST00000615520 NBPF10Q6P3W6 841 aaKnown RBP23.36■■□□□ 1.33
LHX9-208ENST00000615520 NBPF15Q8N660 670 aa23.36■■□□□ 1.33
LHX9-208ENST00000615520 DBF4Q9UBU7 674 aaPredicted RBP23.36■■□□□ 1.33
LHX9-208ENST00000615520 COL15A1P39059 1388 aa23.36■■□□□ 1.33
LHX9-208ENST00000615520 CACNA1FO60840 1977 aa23.35■■□□□ 1.33
LHX9-208ENST00000615520 TRAPPC3LQ5T215 181 aa23.35■■□□□ 1.33
LHX9-208ENST00000615520 SSFA2P28290 1259 aa23.34■■□□□ 1.33
LHX9-208ENST00000615520 IL6STP40189 918 aaPredicted RBP23.34■■□□□ 1.33
LHX9-208ENST00000615520 PROSER3Q2NL68 480 aa23.34■■□□□ 1.33
LHX9-208ENST00000615520 AMIGO3Q86WK7 504 aa23.34■■□□□ 1.33
LHX9-208ENST00000615520 DDX21Q9NR30 783 aaKnown RBP eCLIP23.34■■□□□ 1.33
LHX9-208ENST00000615520 FLAD1Q8NFF5 587 aa23.33■■□□□ 1.33
LHX9-208ENST00000615520 PNPLA7Q6ZV29 1317 aa23.33■■□□□ 1.32
LHX9-208ENST00000615520 RFC4P35249 363 aa23.32■■□□□ 1.32
LHX9-208ENST00000615520 AIMP1Q12904 312 aaKnown RBP23.32■■□□□ 1.32
LHX9-208ENST00000615520 A0A087WZG4 1122 aa23.31■■□□□ 1.32
LHX9-208ENST00000615520 SLC4A2P04920 1241 aa23.31■■□□□ 1.32
LHX9-208ENST00000615520 CT47B1P0C2W7 299 aaPredicted RBP23.31■■□□□ 1.32
LHX9-208ENST00000615520 ADRA2BP18089 450 aa23.31■■□□□ 1.32
LHX9-208ENST00000615520 EIF5P55010 431 aaKnown RBP23.31■■□□□ 1.32
LHX9-208ENST00000615520 PDIA6Q15084 440 aa23.31■■□□□ 1.32
LHX9-208ENST00000615520 COL23A1Q86Y22 540 aaPredicted RBP23.31■■□□□ 1.32
LHX9-208ENST00000615520 ARHGEF1Q92888 912 aaKnown RBP23.31■■□□□ 1.32
LHX9-208ENST00000615520 BCL2L13Q9BXK5 485 aa23.31■■□□□ 1.32
LHX9-208ENST00000615520 HYPKQ9NX55 129 aa23.31■■□□□ 1.32
LHX9-208ENST00000615520 TBC1D2BQ9UPU7 963 aa23.31■■□□□ 1.32
LHX9-208ENST00000615520 KIF6Q6ZMV9 814 aa23.3■■□□□ 1.32
LHX9-208ENST00000615520 DZIP3Q86Y13 1208 aaKnown RBP23.3■■□□□ 1.32
LHX9-208ENST00000615520 SMC4Q9NTJ3 1288 aa23.3■■□□□ 1.32
LHX9-208ENST00000615520 BCORQ6W2J9 1755 aa23.29■■□□□ 1.32
LHX9-208ENST00000615520 ZPR1O75312 459 aa23.29■■□□□ 1.32
LHX9-208ENST00000615520 XAGE3Q8WTP9 111 aa23.29■■□□□ 1.32
LHX9-208ENST00000615520 SCN7AQ01118 1682 aa23.28■■□□□ 1.32
LHX9-208ENST00000615520 CASZ1Q86V15 1759 aa23.28■■□□□ 1.32
LHX9-208ENST00000615520 COPS6Q7L5N1 327 aa23.28■■□□□ 1.32
LHX9-208ENST00000615520 ZNF428Q96B54 188 aa23.28■■□□□ 1.32
LHX9-208ENST00000615520 PHAXQ9H814 394 aaKnown RBP23.28■■□□□ 1.32
LHX9-208ENST00000615520 SRP68Q9UHB9 627 aaKnown RBP23.28■■□□□ 1.32
LHX9-208ENST00000615520 SSH1Q8WYL5 1049 aa23.27■■□□□ 1.32
LHX9-208ENST00000615520 TTLL7Q6ZT98 887 aa23.26■■□□□ 1.31
LHX9-208ENST00000615520 PDGFDQ9GZP0 370 aaPredicted RBP23.26■■□□□ 1.31
LHX9-208ENST00000615520 ZBTB3Q9H5J0 574 aa23.26■■□□□ 1.31
LHX9-208ENST00000615520 ARFGEF2Q9Y6D5 1785 aa23.25■■□□□ 1.31
LHX9-208ENST00000615520 NUP98P52948 1817 aa23.25■■□□□ 1.31
LHX9-208ENST00000615520 ALDH1L2Q3SY69 923 aa23.25■■□□□ 1.31
LHX9-208ENST00000615520 USPL1Q5W0Q7 1092 aa23.25■■□□□ 1.31
LHX9-208ENST00000615520 RARSP54136 660 aaKnown RBP23.24■■□□□ 1.31
LHX9-208ENST00000615520 G2E3Q7L622 706 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms