RNA–Protein interactions for RNA: ENST00000615317.4

MMP28-205, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-205ENST00000615317 BCL2L13Q9BXK5 485 aa11.75□□□□□ -0.53
MMP28-205ENST00000615317 HOXB7P09629 217 aa11.74□□□□□ -0.53
MMP28-205ENST00000615317 EIF2S2P20042 333 aaKnown RBP11.74□□□□□ -0.53
MMP28-205ENST00000615317 BAG6P46379 1132 aa11.74□□□□□ -0.53
MMP28-205ENST00000615317 PIP4K2AP48426 406 aaPredicted RBP11.74□□□□□ -0.53
MMP28-205ENST00000615317 EN1Q05925 392 aaPredicted RBP11.74□□□□□ -0.53
MMP28-205ENST00000615317 EZH2Q15910 746 aaKnown RBP11.73□□□□□ -0.53
MMP28-205ENST00000615317 TXNRD1Q16881 649 aa11.73□□□□□ -0.53
MMP28-205ENST00000615317 VSIG10Q8N0Z9 540 aa11.73□□□□□ -0.53
MMP28-205ENST00000615317 LRRC4BQ9NT99 713 aa11.73□□□□□ -0.53
MMP28-205ENST00000615317 CHPF2Q9P2E5 772 aa11.73□□□□□ -0.53
MMP28-205ENST00000615317 SOS1Q07889 1333 aaPredicted RBP11.72□□□□□ -0.53
MMP28-205ENST00000615317 CNTNAP4Q9C0A0 1308 aa11.72□□□□□ -0.53
MMP28-205ENST00000615317 ANXA1P04083 346 aa11.72□□□□□ -0.53
MMP28-205ENST00000615317 UPF1Q92900 1129 aaKnown RBP eCLIP11.72□□□□□ -0.53
MMP28-205ENST00000615317 ZBTB1Q9Y2K1 713 aa11.72□□□□□ -0.53
MMP28-205ENST00000615317 USP16Q9Y5T5 823 aa11.72□□□□□ -0.53
MMP28-205ENST00000615317 NUP98P52948 1817 aa11.72□□□□□ -0.53
MMP28-205ENST00000615317 PLSCR1O15162 318 aa11.71□□□□□ -0.53
MMP28-205ENST00000615317 VAMP4O75379 141 aa11.71□□□□□ -0.53
MMP28-205ENST00000615317 CYP19A1P11511 503 aaPredicted RBP11.71□□□□□ -0.53
MMP28-205ENST00000615317 CRKLP46109 303 aaKnown RBP11.71□□□□□ -0.53
MMP28-205ENST00000615317 PROSER3Q2NL68 480 aa11.71□□□□□ -0.53
MMP28-205ENST00000615317 SLC27A3Q5K4L6 730 aa11.71□□□□□ -0.53
MMP28-205ENST00000615317 SMC4Q9NTJ3 1288 aa11.71□□□□□ -0.53
MMP28-205ENST00000615317 ZNF330Q9Y3S2 320 aaPredicted RBP11.71□□□□□ -0.53
MMP28-205ENST00000615317 CASZ1Q86V15 1759 aa11.71□□□□□ -0.54
MMP28-205ENST00000615317 COL15A1P39059 1388 aa11.7□□□□□ -0.54
MMP28-205ENST00000615317 COL24A1Q17RW2 1714 aa11.7□□□□□ -0.54
MMP28-205ENST00000615317 STARD3NLO95772 234 aa11.7□□□□□ -0.54
MMP28-205ENST00000615317 CENPBP07199 599 aaPredicted RBP11.7□□□□□ -0.54
MMP28-205ENST00000615317 CT47B1P0C2W7 299 aaPredicted RBP11.7□□□□□ -0.54
MMP28-205ENST00000615317 MYL6BP14649 208 aa11.7□□□□□ -0.54
MMP28-205ENST00000615317 ZNF827Q17R98 1081 aa11.7□□□□□ -0.54
MMP28-205ENST00000615317 PROM2Q8N271 834 aa11.7□□□□□ -0.54
MMP28-205ENST00000615317 SSH1Q8WYL5 1049 aa11.7□□□□□ -0.54
MMP28-205ENST00000615317 CAMKK2Q96RR4 588 aa11.7□□□□□ -0.54
MMP28-205ENST00000615317 STK31Q9BXU1 1019 aa11.7□□□□□ -0.54
MMP28-205ENST00000615317 ANO8Q9HCE9 1232 aaPredicted RBP11.7□□□□□ -0.54
MMP28-205ENST00000615317 CCDC87Q9NVE4 849 aa11.7□□□□□ -0.54
MMP28-205ENST00000615317 ERBB4Q15303 1308 aa11.69□□□□□ -0.54
MMP28-205ENST00000615317 GNPATO15228 680 aa11.69□□□□□ -0.54
MMP28-205ENST00000615317 A1BGP04217 495 aa11.69□□□□□ -0.54
MMP28-205ENST00000615317 CANXP27824 592 aaKnown RBP11.69□□□□□ -0.54
MMP28-205ENST00000615317 RARSP54136 660 aaKnown RBP11.69□□□□□ -0.54
MMP28-205ENST00000615317 CCDC30Q5VVM6 783 aa11.69□□□□□ -0.54
MMP28-205ENST00000615317 AK7Q96M32 723 aa11.69□□□□□ -0.54
MMP28-205ENST00000615317 TEX13AQ9BXU3 409 aaPredicted RBP11.69□□□□□ -0.54
MMP28-205ENST00000615317 RCAN3Q9UKA8 241 aa11.69□□□□□ -0.54
MMP28-205ENST00000615317 NBPF26B4DH59 902 aa11.68□□□□□ -0.54
MMP28-205ENST00000615317 PHF14O94880 888 aa11.68□□□□□ -0.54
MMP28-205ENST00000615317 NBPF14Q5TI25 921 aa11.68□□□□□ -0.54
MMP28-205ENST00000615317 NBPF10Q6P3W6 841 aaKnown RBP11.68□□□□□ -0.54
MMP28-205ENST00000615317 CCDC125Q86Z20 511 aa11.68□□□□□ -0.54
MMP28-205ENST00000615317 NBPF15Q8N660 670 aa11.68□□□□□ -0.54
MMP28-205ENST00000615317 DBF4Q9UBU7 674 aaPredicted RBP11.68□□□□□ -0.54
MMP28-205ENST00000615317 KIF16BQ96L93 1317 aa11.67□□□□□ -0.54
MMP28-205ENST00000615317 BCAR3O75815 825 aa11.67□□□□□ -0.54
MMP28-205ENST00000615317 PDIA6Q15084 440 aa11.67□□□□□ -0.54
MMP28-205ENST00000615317 ALDH1L2Q3SY69 923 aa11.67□□□□□ -0.54
MMP28-205ENST00000615317 INTS5Q6P9B9 1019 aaKnown RBP11.67□□□□□ -0.54
MMP28-205ENST00000615317 SMIM5Q71RC9 77 aa11.67□□□□□ -0.54
MMP28-205ENST00000615317 AMIGO3Q86WK7 504 aa11.67□□□□□ -0.54
MMP28-205ENST00000615317 MRPL50Q8N5N7 158 aaKnown RBP11.67□□□□□ -0.54
MMP28-205ENST00000615317 ZNF428Q96B54 188 aa11.67□□□□□ -0.54
MMP28-205ENST00000615317 DDX21Q9NR30 783 aaKnown RBP eCLIP11.67□□□□□ -0.54
MMP28-205ENST00000615317 PXDNLA1KZ92 1463 aa11.67□□□□□ -0.54
MMP28-205ENST00000615317 LAMB2P55268 1798 aa11.67□□□□□ -0.54
MMP28-205ENST00000615317 G2E3Q7L622 706 aa11.66□□□□□ -0.54
MMP28-205ENST00000615317 LRP10Q7Z4F1 713 aa11.66□□□□□ -0.54
MMP28-205ENST00000615317 PHAXQ9H814 394 aaKnown RBP11.66□□□□□ -0.54
MMP28-205ENST00000615317 SLC4A2P04920 1241 aa11.65□□□□□ -0.54
MMP28-205ENST00000615317 AIMP1Q12904 312 aaKnown RBP11.65□□□□□ -0.54
MMP28-205ENST00000615317 FLIIQ13045 1269 aa11.65□□□□□ -0.54
MMP28-205ENST00000615317 XAGE3Q8WTP9 111 aa11.65□□□□□ -0.54
MMP28-205ENST00000615317 FRAT1Q92837 279 aaPredicted RBP11.65□□□□□ -0.54
MMP28-205ENST00000615317 AKT1S1Q96B36 256 aa11.65□□□□□ -0.54
MMP28-205ENST00000615317 ADCY9O60503 1353 aa11.65□□□□□ -0.55
MMP28-205ENST00000615317 IL6STP40189 918 aaPredicted RBP11.64□□□□□ -0.55
MMP28-205ENST00000615317 FKBP5Q13451 457 aaPredicted RBP11.64□□□□□ -0.55
MMP28-205ENST00000615317 HYPKQ9NX55 129 aa11.64□□□□□ -0.55
MMP28-205ENST00000615317 STK32BQ9NY57 414 aa11.64□□□□□ -0.55
MMP28-205ENST00000615317 RTCBQ9Y3I0 505 aaKnown RBP11.64□□□□□ -0.55
MMP28-205ENST00000615317 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.63□□□□□ -0.55
MMP28-205ENST00000615317 RRP1P56182 461 aaKnown RBP11.63□□□□□ -0.55
MMP28-205ENST00000615317 RC3H1Q5TC82 1133 aaKnown RBP11.63□□□□□ -0.55
MMP28-205ENST00000615317 KIF6Q6ZMV9 814 aa11.63□□□□□ -0.55
MMP28-205ENST00000615317 TTLL7Q6ZT98 887 aa11.63□□□□□ -0.55
MMP28-205ENST00000615317 NPM2Q86SE8 214 aaKnown RBP11.63□□□□□ -0.55
MMP28-205ENST00000615317 ARXQ96QS3 562 aa11.63□□□□□ -0.55
MMP28-205ENST00000615317 CHMP4AQ9BY43 222 aa11.63□□□□□ -0.55
MMP28-205ENST00000615317 ZBTB3Q9H5J0 574 aa11.63□□□□□ -0.55
MMP28-205ENST00000615317 TNNQ9UQP3 1299 aa11.63□□□□□ -0.55
MMP28-205ENST00000615317 PNPLA7Q6ZV29 1317 aa11.62□□□□□ -0.55
MMP28-205ENST00000615317 RPS6KA4O75676 772 aa11.62□□□□□ -0.55
MMP28-205ENST00000615317 SSFA2P28290 1259 aa11.62□□□□□ -0.55
MMP28-205ENST00000615317 EIF5P55010 431 aaKnown RBP11.62□□□□□ -0.55
MMP28-205ENST00000615317 COPS6Q7L5N1 327 aa11.62□□□□□ -0.55
MMP28-205ENST00000615317 DZIP3Q86Y13 1208 aaKnown RBP11.62□□□□□ -0.55
MMP28-205ENST00000615317 TFCP2L1Q9NZI6 479 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms