RNA–Protein interactions for RNA: ENST00000615135.4

FAM228B-209, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-209ENST00000615135 DCAF5Q96JK2 942 aa10.15□□□□□ -0.78
FAM228B-209ENST00000615135 AK7Q96M32 723 aa10.15□□□□□ -0.78
FAM228B-209ENST00000615135 BMP2KQ9NSY1 1161 aaPredicted RBP10.15□□□□□ -0.78
FAM228B-209ENST00000615135 PALLDQ8WX93 1383 aa10.14□□□□□ -0.79
FAM228B-209ENST00000615135 TTLL13PA6NNM8 815 aa10.14□□□□□ -0.79
FAM228B-209ENST00000615135 ANP32CO43423 234 aa10.14□□□□□ -0.79
FAM228B-209ENST00000615135 MMP10P09238 476 aa10.14□□□□□ -0.79
FAM228B-209ENST00000615135 VEGFAP15692 232 aaPredicted RBP10.14□□□□□ -0.79
FAM228B-209ENST00000615135 CTCFP49711 727 aaPredicted RBP10.14□□□□□ -0.79
FAM228B-209ENST00000615135 DDX10Q13206 875 aaKnown RBP10.14□□□□□ -0.79
FAM228B-209ENST00000615135 KCNV2Q8TDN2 545 aa10.14□□□□□ -0.79
FAM228B-209ENST00000615135 L3MBTL2Q969R5 705 aa10.14□□□□□ -0.79
FAM228B-209ENST00000615135 HSPA5P11021 654 aaKnown RBP10.13□□□□□ -0.79
FAM228B-209ENST00000615135 SMARCC1Q92922 1105 aaPredicted RBP10.13□□□□□ -0.79
FAM228B-209ENST00000615135 RNF181Q9P0P0 153 aa10.13□□□□□ -0.79
FAM228B-209ENST00000615135 KTN1Q86UP2 1357 aaKnown RBP10.13□□□□□ -0.79
FAM228B-209ENST00000615135 CGNL1Q0VF96 1302 aa10.12□□□□□ -0.79
FAM228B-209ENST00000615135 EVC2Q86UK5 1308 aa10.12□□□□□ -0.79
FAM228B-209ENST00000615135 PHF14O94880 888 aa10.12□□□□□ -0.79
FAM228B-209ENST00000615135 KDM6AO15550 1401 aaPredicted RBP10.12□□□□□ -0.79
FAM228B-209ENST00000615135 PDE4DIPQ5VU43 2346 aa10.11□□□□□ -0.79
FAM228B-209ENST00000615135 MON2Q7Z3U7 1717 aa10.11□□□□□ -0.79
FAM228B-209ENST00000615135 GLTPD2A6NH11 291 aa10.11□□□□□ -0.79
FAM228B-209ENST00000615135 GOLGA2Q08379 1002 aa10.11□□□□□ -0.79
FAM228B-209ENST00000615135 NLGN1Q8N2Q7 840 aa10.11□□□□□ -0.79
FAM228B-209ENST00000615135 WDR70Q9NW82 654 aa10.11□□□□□ -0.79
FAM228B-209ENST00000615135 PIM2Q9P1W9 311 aa10.11□□□□□ -0.79
FAM228B-209ENST00000615135 MAP2P11137 1827 aaKnown RBP10.11□□□□□ -0.79
FAM228B-209ENST00000615135 MEGF6O75095 1541 aa10.11□□□□□ -0.79
FAM228B-209ENST00000615135 DPY19L2Q6NUT2 758 aa10.1□□□□□ -0.79
FAM228B-209ENST00000615135 NME9Q86XW9 330 aa10.1□□□□□ -0.79
FAM228B-209ENST00000615135 CCDC87Q9NVE4 849 aa10.1□□□□□ -0.79
FAM228B-209ENST00000615135 WBP1LQ9NX94 342 aa10.1□□□□□ -0.79
FAM228B-209ENST00000615135 CNTNAP1P78357 1384 aa10.1□□□□□ -0.79
FAM228B-209ENST00000615135 SBNO2Q9Y2G9 1366 aa10.1□□□□□ -0.79
FAM228B-209ENST00000615135 POTECB2RU33 542 aa10.09□□□□□ -0.79
FAM228B-209ENST00000615135 TIE1P35590 1138 aa10.09□□□□□ -0.79
FAM228B-209ENST00000615135 MKRN3Q13064 507 aaKnown RBP10.09□□□□□ -0.79
FAM228B-209ENST00000615135 DALRD3Q5D0E6 543 aaKnown RBP10.09□□□□□ -0.79
FAM228B-209ENST00000615135 LINC00116Q8NCU8 138 aa10.09□□□□□ -0.79
FAM228B-209ENST00000615135 MKRN1Q9UHC7 482 aaKnown RBP10.09□□□□□ -0.79
FAM228B-209ENST00000615135 CLCN6P51797 869 aa10.08□□□□□ -0.8
FAM228B-209ENST00000615135 LBX1P52954 281 aa10.08□□□□□ -0.8
FAM228B-209ENST00000615135 TMF1P82094 1093 aa10.08□□□□□ -0.8
FAM228B-209ENST00000615135 MPRIPQ6WCQ1 1025 aa10.08□□□□□ -0.8
FAM228B-209ENST00000615135 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.08□□□□□ -0.8
FAM228B-209ENST00000615135 AIDAQ96BJ3 306 aa10.08□□□□□ -0.8
FAM228B-209ENST00000615135 ROCK2O75116 1388 aaKnown RBP10.08□□□□□ -0.8
FAM228B-209ENST00000615135 C4AP0C0L4 1744 aa10.07□□□□□ -0.8
FAM228B-209ENST00000615135 ITGB4P16144 1822 aa10.07□□□□□ -0.8
FAM228B-209ENST00000615135 LOC102724428A0A0B4J2F2 783 aa10.07□□□□□ -0.8
FAM228B-209ENST00000615135 GNPATO15228 680 aa10.07□□□□□ -0.8
FAM228B-209ENST00000615135 SIK1P57059 783 aa10.07□□□□□ -0.8
FAM228B-209ENST00000615135 LTV1Q96GA3 475 aaPredicted RBP10.07□□□□□ -0.8
FAM228B-209ENST00000615135 TRIM35Q9UPQ4 493 aa10.07□□□□□ -0.8
FAM228B-209ENST00000615135 VIRMAQ69YN4 1812 aaKnown RBP10.07□□□□□ -0.8
FAM228B-209ENST00000615135 RGPD2P0DJD1 1756 aa10.06□□□□□ -0.8
FAM228B-209ENST00000615135 CD163L1Q9NR16 1453 aa10.06□□□□□ -0.8
FAM228B-209ENST00000615135 HSPA8P11142 646 aaKnown RBP10.06□□□□□ -0.8
FAM228B-209ENST00000615135 ITPK1Q13572 414 aa10.06□□□□□ -0.8
FAM228B-209ENST00000615135 PIGBQ92521 554 aa10.06□□□□□ -0.8
FAM228B-209ENST00000615135 DCBLD2Q96PD2 775 aa10.06□□□□□ -0.8
FAM228B-209ENST00000615135 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.06□□□□□ -0.8
FAM228B-209ENST00000615135 PCDH11XQ9BZA7 1347 aa10.06□□□□□ -0.8
FAM228B-209ENST00000615135 PCDH11YQ9BZA8 1340 aa10.06□□□□□ -0.8
FAM228B-209ENST00000615135 GYS1P13807 737 aa10.05□□□□□ -0.8
FAM228B-209ENST00000615135 LMNB1P20700 586 aa10.05□□□□□ -0.8
FAM228B-209ENST00000615135 HOXC9P31274 260 aa10.05□□□□□ -0.8
FAM228B-209ENST00000615135 VEGFBP49765 207 aa10.05□□□□□ -0.8
FAM228B-209ENST00000615135 ATN1P54259 1190 aaPredicted RBP10.05□□□□□ -0.8
FAM228B-209ENST00000615135 TRAPPC3LQ5T215 181 aa10.05□□□□□ -0.8
FAM228B-209ENST00000615135 NBPF6Q5VWK0 638 aa10.05□□□□□ -0.8
FAM228B-209ENST00000615135 NBPF4Q96M43 638 aa10.05□□□□□ -0.8
FAM228B-209ENST00000615135 LARP6Q9BRS8 491 aaKnown RBP10.05□□□□□ -0.8
FAM228B-209ENST00000615135 GTF3C3Q9Y5Q9 886 aa10.05□□□□□ -0.8
FAM228B-209ENST00000615135 WASHC2AQ641Q2 1341 aa10.05□□□□□ -0.8
FAM228B-209ENST00000615135 PASKQ96RG2 1323 aa10.05□□□□□ -0.8
FAM228B-209ENST00000615135 CCDC85CA6NKD9 419 aa10.04□□□□□ -0.8
FAM228B-209ENST00000615135 CCER2I3L3R5 266 aa10.04□□□□□ -0.8
FAM228B-209ENST00000615135 CYP27B1O15528 508 aa10.04□□□□□ -0.8
FAM228B-209ENST00000615135 PARP3Q9Y6F1 533 aa10.04□□□□□ -0.8
FAM228B-209ENST00000615135 MAP3K19Q56UN5 1328 aa10.04□□□□□ -0.8
FAM228B-209ENST00000615135 EDC4Q6P2E9 1401 aaKnown RBP10.03□□□□□ -0.8
FAM228B-209ENST00000615135 RAPGEF4Q8WZA2 1011 aa10.03□□□□□ -0.8
FAM228B-209ENST00000615135 ARHGEF1Q92888 912 aaKnown RBP10.03□□□□□ -0.8
FAM228B-209ENST00000615135 POLR3GLQ9BT43 218 aa10.03□□□□□ -0.8
FAM228B-209ENST00000615135 TATP17735 454 aaPredicted RBP10.02□□□□□ -0.81
FAM228B-209ENST00000615135 RC3H1Q5TC82 1133 aaKnown RBP10.02□□□□□ -0.81
FAM228B-209ENST00000615135 CARD11Q9BXL7 1154 aa10.02□□□□□ -0.81
FAM228B-209ENST00000615135 RTCBQ9Y3I0 505 aaKnown RBP10.02□□□□□ -0.81
FAM228B-209ENST00000615135 ATP6V1AP38606 617 aa10.01□□□□□ -0.81
FAM228B-209ENST00000615135 RASSF7Q02833 373 aa10.01□□□□□ -0.81
FAM228B-209ENST00000615135 KIF7Q2M1P5 1343 aa10.01□□□□□ -0.81
FAM228B-209ENST00000615135 CCDC88AQ3V6T2 1871 aa10□□□□□ -0.81
FAM228B-209ENST00000615135 ZNF831Q5JPB2 1677 aa10□□□□□ -0.81
FAM228B-209ENST00000615135 ATMINO43313 823 aaPredicted RBP10□□□□□ -0.81
FAM228B-209ENST00000615135 POTEIP0CG38 1075 aa10□□□□□ -0.81
FAM228B-209ENST00000615135 CHRNA5P30532 468 aa10□□□□□ -0.81
FAM228B-209ENST00000615135 AMPHP49418 695 aa10□□□□□ -0.81
FAM228B-209ENST00000615135 MAP2K1Q02750 393 aaPredicted RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms