RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 CTAGE8P0CG41 777 aa15.88■□□□□ 0.13
CHD1-212ENST00000614616 INPP5BP32019 993 aa15.88■□□□□ 0.13
CHD1-212ENST00000614616 CTAGE6Q86UF2 777 aa15.88■□□□□ 0.13
CHD1-212ENST00000614616 CTAGE4Q8IX94 777 aa15.88■□□□□ 0.13
CHD1-212ENST00000614616 ATRIPQ8WXE1 791 aa15.88■□□□□ 0.13
CHD1-212ENST00000614616 STAC3Q96MF2 364 aa15.88■□□□□ 0.13
CHD1-212ENST00000614616 DNAI1Q9UI46 699 aa15.88■□□□□ 0.13
CHD1-212ENST00000614616 TCHPQ9BT92 498 aa15.88■□□□□ 0.13
CHD1-212ENST00000614616 UBE4AQ14139 1066 aa15.88■□□□□ 0.13
CHD1-212ENST00000614616 KIF4AO95239 1232 aa15.88■□□□□ 0.13
CHD1-212ENST00000614616 KDM4AO75164 1064 aa15.87■□□□□ 0.13
CHD1-212ENST00000614616 WASF1Q92558 559 aa15.87■□□□□ 0.13
CHD1-212ENST00000614616 PIBF1Q8WXW3 757 aa15.87■□□□□ 0.13
CHD1-212ENST00000614616 FBF1Q8TES7 1133 aa15.87■□□□□ 0.13
CHD1-212ENST00000614616 FGFR1OPO95684 399 aaKnown RBP15.87■□□□□ 0.13
CHD1-212ENST00000614616 ARID4AP29374 1257 aaPredicted RBP15.87■□□□□ 0.13
CHD1-212ENST00000614616 EXOSC9Q06265 439 aaKnown RBP15.87■□□□□ 0.13
CHD1-212ENST00000614616 LMNTD2Q8IXW0 634 aa15.87■□□□□ 0.13
CHD1-212ENST00000614616 LIMCH1Q9UPQ0 1083 aa15.87■□□□□ 0.13
CHD1-212ENST00000614616 HECW1Q76N89 1606 aa15.87■□□□□ 0.13
CHD1-212ENST00000614616 ANKRD18BA2A2Z9 1011 aa15.87■□□□□ 0.13
CHD1-212ENST00000614616 GBP1P32455 592 aa15.87■□□□□ 0.13
CHD1-212ENST00000614616 VPS36Q86VN1 386 aa15.87■□□□□ 0.13
CHD1-212ENST00000614616 LACTBP83111 547 aaPredicted RBP15.87■□□□□ 0.13
CHD1-212ENST00000614616 RIOK3O14730 519 aaKnown RBP15.86■□□□□ 0.13
CHD1-212ENST00000614616 CCDC155Q8N6L0 562 aa15.86■□□□□ 0.13
CHD1-212ENST00000614616 KIF21AQ7Z4S6 1674 aa15.86■□□□□ 0.13
CHD1-212ENST00000614616 RBBP5Q15291 538 aaKnown RBP15.86■□□□□ 0.13
CHD1-212ENST00000614616 BMP2KLQ5H9B9 411 aa15.86■□□□□ 0.13
CHD1-212ENST00000614616 ERBINQ96RT1 1412 aa15.86■□□□□ 0.13
CHD1-212ENST00000614616 CWC27Q6UX04 472 aaKnown RBP15.86■□□□□ 0.13
CHD1-212ENST00000614616 VPS37DQ86XT2 251 aa15.86■□□□□ 0.13
CHD1-212ENST00000614616 EFCC1Q9HA90 598 aa15.86■□□□□ 0.13
CHD1-212ENST00000614616 GIMAP6Q6P9H5 292 aa15.86■□□□□ 0.13
CHD1-212ENST00000614616 SH3BGRP55822 239 aaPredicted RBP15.85■□□□□ 0.13
CHD1-212ENST00000614616 NAP1L3Q99457 506 aaPredicted RBP15.85■□□□□ 0.13
CHD1-212ENST00000614616 CCDC184Q52MB2 194 aa15.85■□□□□ 0.13
CHD1-212ENST00000614616 CCDC129Q6ZRS4 1044 aa15.85■□□□□ 0.13
CHD1-212ENST00000614616 ZSWIM4Q9H7M6 989 aa15.85■□□□□ 0.13
CHD1-212ENST00000614616 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.85■□□□□ 0.13
CHD1-212ENST00000614616 ATP2B1P20020 1258 aa15.85■□□□□ 0.13
CHD1-212ENST00000614616 SLC3A2P08195 630 aaKnown RBP15.85■□□□□ 0.13
CHD1-212ENST00000614616 MAP3K1Q13233 1512 aa15.85■□□□□ 0.13
CHD1-212ENST00000614616 UBASH3AP57075 661 aa15.85■□□□□ 0.13
CHD1-212ENST00000614616 TWISTNBQ3B726 338 aaPredicted RBP15.85■□□□□ 0.13
CHD1-212ENST00000614616 CCDC69A6NI79 296 aa15.84■□□□□ 0.13
CHD1-212ENST00000614616 FAM177BA6PVY3 158 aa15.84■□□□□ 0.13
CHD1-212ENST00000614616 TBC1D9Q6ZT07 1266 aa15.84■□□□□ 0.13
CHD1-212ENST00000614616 HOMEZQ8IX15 550 aa15.84■□□□□ 0.13
CHD1-212ENST00000614616 DDX12PQ92771 950 aa15.84■□□□□ 0.13
CHD1-212ENST00000614616 IFT74Q96LB3 600 aa15.84■□□□□ 0.13
CHD1-212ENST00000614616 ZSCAN26Q16670 478 aa15.84■□□□□ 0.13
CHD1-212ENST00000614616 ATP2C2O75185 946 aa15.84■□□□□ 0.13
CHD1-212ENST00000614616 KRT18P05783 430 aaKnown RBP15.84■□□□□ 0.13
CHD1-212ENST00000614616 CSB-PGBD3P0DP91 1061 aa15.84■□□□□ 0.13
CHD1-212ENST00000614616 NEUROD6Q96NK8 337 aa15.84■□□□□ 0.13
CHD1-212ENST00000614616 MYH10P35580 1976 aa15.84■□□□□ 0.13
CHD1-212ENST00000614616 MTHFSP49914 203 aa15.83■□□□□ 0.13
CHD1-212ENST00000614616 CCDC186Q7Z3E2 898 aa15.83■□□□□ 0.13
CHD1-212ENST00000614616 GPRASP1Q5JY77 1395 aa15.83■□□□□ 0.13
CHD1-212ENST00000614616 C20orf194Q5TEA3 1177 aa15.83■□□□□ 0.13
CHD1-212ENST00000614616 GSTTP1A0A1W2PQM5 241 aa15.83■□□□□ 0.12
CHD1-212ENST00000614616 ZEB2O60315 1214 aa15.83■□□□□ 0.12
CHD1-212ENST00000614616 TTC14Q96N46 770 aa15.83■□□□□ 0.12
CHD1-212ENST00000614616 ATAD2Q6PL18 1390 aa15.83■□□□□ 0.12
CHD1-212ENST00000614616 CACNA2D4Q7Z3S7 1137 aa15.83■□□□□ 0.12
CHD1-212ENST00000614616 CPLX4Q7Z7G2 160 aa15.83■□□□□ 0.12
CHD1-212ENST00000614616 G3V3G9 751 aa15.82■□□□□ 0.12
CHD1-212ENST00000614616 HNRNPMP52272 730 aaKnown RBP eCLIP15.82■□□□□ 0.12
CHD1-212ENST00000614616 DCAF8Q5TAQ9 597 aa15.82■□□□□ 0.12
CHD1-212ENST00000614616 CETN2P41208 172 aa15.82■□□□□ 0.12
CHD1-212ENST00000614616 C8orf34Q49A92 452 aa15.82■□□□□ 0.12
CHD1-212ENST00000614616 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.82■□□□□ 0.12
CHD1-212ENST00000614616 CTAGE1Q96RT6 745 aa15.82■□□□□ 0.12
CHD1-212ENST00000614616 TBC1D2BQ9UPU7 963 aa15.82■□□□□ 0.12
CHD1-212ENST00000614616 LUC7L2Q9Y383 392 aaKnown RBP15.82■□□□□ 0.12
CHD1-212ENST00000614616 CCDC172P0C7W6 258 aa15.82■□□□□ 0.12
CHD1-212ENST00000614616 SEPT14Q6ZU15 432 aa15.82■□□□□ 0.12
CHD1-212ENST00000614616 ZSCAN16Q9H4T2 348 aaPredicted RBP15.82■□□□□ 0.12
CHD1-212ENST00000614616 GDPD2Q9HCC8 539 aa15.82■□□□□ 0.12
CHD1-212ENST00000614616 FYB1O15117 783 aa15.82■□□□□ 0.12
CHD1-212ENST00000614616 PPP1R12BO60237 982 aaPredicted RBP15.82■□□□□ 0.12
CHD1-212ENST00000614616 USP48Q86UV5 1035 aa15.82■□□□□ 0.12
CHD1-212ENST00000614616 TMEM57Q8N5G2 664 aa15.82■□□□□ 0.12
CHD1-212ENST00000614616 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.82■□□□□ 0.121e-6■■■□□ 14.6
CHD1-212ENST00000614616 SEPT11Q9NVA2 429 aaKnown RBP15.82■□□□□ 0.12
CHD1-212ENST00000614616 GCKP35557 465 aa15.82■□□□□ 0.12
CHD1-212ENST00000614616 FSIP1Q8NA03 581 aa15.82■□□□□ 0.12
CHD1-212ENST00000614616 EFCAB5A4FU69 1503 aa15.81■□□□□ 0.12
CHD1-212ENST00000614616 IFI16Q16666 785 aaKnown RBP15.81■□□□□ 0.12
CHD1-212ENST00000614616 CNNM3Q8NE01 707 aa15.81■□□□□ 0.12
CHD1-212ENST00000614616 SYT1P21579 422 aa15.81■□□□□ 0.12
CHD1-212ENST00000614616 NCOA2Q15596 1464 aa15.81■□□□□ 0.12
CHD1-212ENST00000614616 ZNF500O60304 480 aaPredicted RBP15.81■□□□□ 0.12
CHD1-212ENST00000614616 HMOX1P09601 288 aa15.81■□□□□ 0.12
CHD1-212ENST00000614616 VCXQ9H320 206 aa15.81■□□□□ 0.12
CHD1-212ENST00000614616 HFM1A2PYH4 1435 aa15.81■□□□□ 0.12
CHD1-212ENST00000614616 ZSCAN22P10073 491 aaPredicted RBP15.81■□□□□ 0.12
CHD1-212ENST00000614616 MAP4K4O95819 1239 aaPredicted RBP15.81■□□□□ 0.12
CHD1-212ENST00000614616 KANK3Q6NY19 840 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms