RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 A0A0G2JS52 829 aa8.01□□□□□ -1.13
CBWD3-210ENST00000614398 MS4A1P11836 297 aa8.01□□□□□ -1.13
CBWD3-210ENST00000614398 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.01□□□□□ -1.13
CBWD3-210ENST00000614398 SSH1Q8WYL5 1049 aa8.01□□□□□ -1.13
CBWD3-210ENST00000614398 ASAP1Q9ULH1 1129 aa8.01□□□□□ -1.13
CBWD3-210ENST00000614398 CNTNAP4Q9C0A0 1308 aa8□□□□□ -1.13
CBWD3-210ENST00000614398 SCN7AQ01118 1682 aa8□□□□□ -1.13
CBWD3-210ENST00000614398 PLSCR1O15162 318 aa8□□□□□ -1.13
CBWD3-210ENST00000614398 RRP1P56182 461 aaKnown RBP8□□□□□ -1.13
CBWD3-210ENST00000614398 SLC39A6Q13433 755 aa8□□□□□ -1.13
CBWD3-210ENST00000614398 ARFGEF2Q9Y6D5 1785 aa8□□□□□ -1.13
CBWD3-210ENST00000614398 PDE3AQ14432 1141 aa8□□□□□ -1.13
CBWD3-210ENST00000614398 SLC27A3Q5K4L6 730 aa8□□□□□ -1.13
CBWD3-210ENST00000614398 RC3H1Q5TC82 1133 aaKnown RBP8□□□□□ -1.13
CBWD3-210ENST00000614398 HDGFL1Q5TGJ6 251 aa8□□□□□ -1.13
CBWD3-210ENST00000614398 LRP10Q7Z4F1 713 aa8□□□□□ -1.13
CBWD3-210ENST00000614398 DDX21Q9NR30 783 aaKnown RBP eCLIP8□□□□□ -1.13
CBWD3-210ENST00000614398 DBF4Q9UBU7 674 aaPredicted RBP8□□□□□ -1.13
CBWD3-210ENST00000614398 ANKRD36CQ5JPF3 1778 aa8□□□□□ -1.13
CBWD3-210ENST00000614398 ATP10DQ9P241 1426 aa7.99□□□□□ -1.13
CBWD3-210ENST00000614398 IPO8O15397 1037 aaKnown RBP7.99□□□□□ -1.13
CBWD3-210ENST00000614398 KCNQ2O43526 872 aa7.99□□□□□ -1.13
CBWD3-210ENST00000614398 KRT24Q2M2I5 525 aa7.99□□□□□ -1.13
CBWD3-210ENST00000614398 SLC4A9Q96Q91 983 aa7.99□□□□□ -1.13
CBWD3-210ENST00000614398 HYPKQ9NX55 129 aa7.99□□□□□ -1.13
CBWD3-210ENST00000614398 UBR3Q6ZT12 1888 aa7.99□□□□□ -1.13
CBWD3-210ENST00000614398 LOC102724428A0A0B4J2F2 783 aa7.99□□□□□ -1.13
CBWD3-210ENST00000614398 CYP19A1P11511 503 aaPredicted RBP7.99□□□□□ -1.13
CBWD3-210ENST00000614398 SIK1P57059 783 aa7.99□□□□□ -1.13
CBWD3-210ENST00000614398 PDIA6Q15084 440 aa7.99□□□□□ -1.13
CBWD3-210ENST00000614398 CCDC125Q86Z20 511 aa7.99□□□□□ -1.13
CBWD3-210ENST00000614398 ACSBG1Q96GR2 724 aa7.99□□□□□ -1.13
CBWD3-210ENST00000614398 STK31Q9BXU1 1019 aa7.99□□□□□ -1.13
CBWD3-210ENST00000614398 SMC4Q9NTJ3 1288 aa7.99□□□□□ -1.13
CBWD3-210ENST00000614398 ABCC4O15439 1325 aa7.99□□□□□ -1.13
CBWD3-210ENST00000614398 STARD3NLO95772 234 aa7.98□□□□□ -1.13
CBWD3-210ENST00000614398 AAMPQ13685 434 aa7.98□□□□□ -1.13
CBWD3-210ENST00000614398 API5Q9BZZ5 524 aaKnown RBP7.98□□□□□ -1.13
CBWD3-210ENST00000614398 MYH14Q7Z406 1995 aaKnown RBP7.98□□□□□ -1.13
CBWD3-210ENST00000614398 ZKSCAN2Q63HK3 967 aa7.98□□□□□ -1.13
CBWD3-210ENST00000614398 C4AP0C0L4 1744 aa7.97□□□□□ -1.13
CBWD3-210ENST00000614398 BCAR3O75815 825 aa7.97□□□□□ -1.13
CBWD3-210ENST00000614398 ATF7IPQ6VMQ6 1270 aa7.97□□□□□ -1.13
CBWD3-210ENST00000614398 DNAJC10Q8IXB1 793 aa7.97□□□□□ -1.13
CBWD3-210ENST00000614398 SYTL4Q96C24 671 aaPredicted RBP7.97□□□□□ -1.13
CBWD3-210ENST00000614398 ANO8Q9HCE9 1232 aaPredicted RBP7.97□□□□□ -1.13
CBWD3-210ENST00000614398 TUBGCP6Q96RT7 1819 aa7.96□□□□□ -1.13
CBWD3-210ENST00000614398 IL6STP40189 918 aaPredicted RBP7.96□□□□□ -1.13
CBWD3-210ENST00000614398 ITPK1Q13572 414 aa7.96□□□□□ -1.13
CBWD3-210ENST00000614398 CHPF2Q9P2E5 772 aa7.96□□□□□ -1.13
CBWD3-210ENST00000614398 USP16Q9Y5T5 823 aa7.96□□□□□ -1.13
CBWD3-210ENST00000614398 COL24A1Q17RW2 1714 aa7.96□□□□□ -1.14
CBWD3-210ENST00000614398 PRAMEF22A3QJZ6 481 aa7.96□□□□□ -1.14
CBWD3-210ENST00000614398 NBPF26B4DH59 902 aa7.96□□□□□ -1.14
CBWD3-210ENST00000614398 FLIIQ13045 1269 aa7.96□□□□□ -1.14
CBWD3-210ENST00000614398 NBPF14Q5TI25 921 aa7.96□□□□□ -1.14
CBWD3-210ENST00000614398 NBPF10Q6P3W6 841 aaKnown RBP7.96□□□□□ -1.14
CBWD3-210ENST00000614398 PTF1AQ7RTS3 328 aa7.96□□□□□ -1.14
CBWD3-210ENST00000614398 NBPF15Q8N660 670 aa7.96□□□□□ -1.14
CBWD3-210ENST00000614398 CCDC87Q9NVE4 849 aa7.96□□□□□ -1.14
CBWD3-210ENST00000614398 ADCY9O60503 1353 aa7.95□□□□□ -1.14
CBWD3-210ENST00000614398 ELL2O00472 640 aaPredicted RBP7.95□□□□□ -1.14
CBWD3-210ENST00000614398 PTCD1O75127 700 aaKnown RBP7.95□□□□□ -1.14
CBWD3-210ENST00000614398 SLC4A2P04920 1241 aa7.95□□□□□ -1.14
CBWD3-210ENST00000614398 INTS3Q68E01 1043 aaKnown RBP7.95□□□□□ -1.14
CBWD3-210ENST00000614398 INTS5Q6P9B9 1019 aaKnown RBP7.95□□□□□ -1.14
CBWD3-210ENST00000614398 SUPT16HQ9Y5B9 1047 aaKnown RBP7.95□□□□□ -1.14
CBWD3-210ENST00000614398 A0A087WZG4 1122 aa7.95□□□□□ -1.14
CBWD3-210ENST00000614398 TRIM37O94972 964 aa7.95□□□□□ -1.14
CBWD3-210ENST00000614398 TRIM27P14373 513 aa7.95□□□□□ -1.14
CBWD3-210ENST00000614398 ATP6V1AP38606 617 aa7.95□□□□□ -1.14
CBWD3-210ENST00000614398 RBM42Q9BTD8 480 aaKnown RBP7.95□□□□□ -1.14
CBWD3-210ENST00000614398 NOB1Q9ULX3 412 aaKnown RBP7.95□□□□□ -1.14
CBWD3-210ENST00000614398 NUP98P52948 1817 aa7.95□□□□□ -1.14
CBWD3-210ENST00000614398 LAMB2P55268 1798 aa7.95□□□□□ -1.14
CBWD3-210ENST00000614398 COL15A1P39059 1388 aa7.94□□□□□ -1.14
CBWD3-210ENST00000614398 AFDNP55196 1824 aaKnown RBP7.94□□□□□ -1.14
CBWD3-210ENST00000614398 ERVV-1B6SEH8 477 aa7.94□□□□□ -1.14
CBWD3-210ENST00000614398 DDX58O95786 925 aaKnown RBP7.94□□□□□ -1.14
CBWD3-210ENST00000614398 EIF5P55010 431 aaKnown RBP7.94□□□□□ -1.14
CBWD3-210ENST00000614398 FAM182BQ5T319 152 aa7.94□□□□□ -1.14
CBWD3-210ENST00000614398 LINC00116Q8NCU8 138 aa7.94□□□□□ -1.14
CBWD3-210ENST00000614398 CHMP4BQ9H444 224 aaKnown RBP7.94□□□□□ -1.14
CBWD3-210ENST00000614398 CCNL1Q9UK58 526 aaPredicted RBP7.94□□□□□ -1.14
CBWD3-210ENST00000614398 KAT6BQ8WYB5 2073 aa7.94□□□□□ -1.14
CBWD3-210ENST00000614398 CRKLP46109 303 aaKnown RBP7.94□□□□□ -1.14
CBWD3-210ENST00000614398 PROSER3Q2NL68 480 aa7.94□□□□□ -1.14
CBWD3-210ENST00000614398 KSR2Q6VAB6 950 aa7.94□□□□□ -1.14
CBWD3-210ENST00000614398 DZIP1LQ8IYY4 767 aaKnown RBP7.94□□□□□ -1.14
CBWD3-210ENST00000614398 RPS6KA4O75676 772 aa7.93□□□□□ -1.14
CBWD3-210ENST00000614398 ALDH1L1O75891 902 aa7.93□□□□□ -1.14
CBWD3-210ENST00000614398 EIF2S2P20042 333 aaKnown RBP7.93□□□□□ -1.14
CBWD3-210ENST00000614398 CCT4P50991 539 aaKnown RBP7.93□□□□□ -1.14
CBWD3-210ENST00000614398 G2E3Q7L622 706 aa7.93□□□□□ -1.14
CBWD3-210ENST00000614398 PLBD2Q8NHP8 589 aa7.93□□□□□ -1.14
CBWD3-210ENST00000614398 CAMKK2Q96RR4 588 aa7.93□□□□□ -1.14
CBWD3-210ENST00000614398 TRIM28Q13263 835 aaKnown RBP7.93□□□□□ -1.14
CBWD3-210ENST00000614398 TXNRD1Q16881 649 aa7.93□□□□□ -1.14
CBWD3-210ENST00000614398 A1BGP04217 495 aa7.92□□□□□ -1.14
CBWD3-210ENST00000614398 MVPQ14764 893 aaKnown RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms