RNA–Protein interactions for RNA: ENST00000613452.1

LINC01138-204, Transcript of long intergenic non-protein coding RNA 1138, humanhuman

TSL 1 (best)

Gene LINC01138, Length 1,050 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01138-204ENST00000613452 SCN11AQ9UI33 1791 aa12.87□□□□□ -0.35
LINC01138-204ENST00000613452 MRC1P22897 1456 aa12.87□□□□□ -0.35
LINC01138-204ENST00000613452 RSPH6AQ9H0K4 717 aa12.87□□□□□ -0.35
LINC01138-204ENST00000613452 PDZRN3Q9UPQ7 1066 aa12.87□□□□□ -0.35
LINC01138-204ENST00000613452 PPP2R1AP30153 589 aa12.86□□□□□ -0.35
LINC01138-204ENST00000613452 IL6STP40189 918 aaPredicted RBP12.86□□□□□ -0.35
LINC01138-204ENST00000613452 NFIXQ14938 502 aa12.86□□□□□ -0.35
LINC01138-204ENST00000613452 ZNF496Q96IT1 587 aaPredicted RBP12.86□□□□□ -0.35
LINC01138-204ENST00000613452 PHACTR3Q96KR7 559 aa12.86□□□□□ -0.35
LINC01138-204ENST00000613452 FMNL2Q96PY5 1086 aa12.86□□□□□ -0.35
LINC01138-204ENST00000613452 ZBTB1Q9Y2K1 713 aa12.86□□□□□ -0.35
LINC01138-204ENST00000613452 CICQ96RK0 1608 aaPredicted RBP12.86□□□□□ -0.35
LINC01138-204ENST00000613452 COL3A1P02461 1466 aaPredicted RBP12.85□□□□□ -0.35
LINC01138-204ENST00000613452 CEMIPQ8WUJ3 1361 aa12.85□□□□□ -0.35
LINC01138-204ENST00000613452 SERPINB2P05120 415 aa12.85□□□□□ -0.35
LINC01138-204ENST00000613452 CANXP27824 592 aaKnown RBP12.85□□□□□ -0.35
LINC01138-204ENST00000613452 PRKAR2BP31323 418 aa12.85□□□□□ -0.35
LINC01138-204ENST00000613452 BCL2L12Q9HB09 334 aa12.85□□□□□ -0.35
LINC01138-204ENST00000613452 WWC3Q9ULE0 1092 aa12.85□□□□□ -0.35
LINC01138-204ENST00000613452 KIF13BQ9NQT8 1826 aa12.85□□□□□ -0.35
LINC01138-204ENST00000613452 HEG1Q9ULI3 1381 aa12.84□□□□□ -0.35
LINC01138-204ENST00000613452 ADAMTS7Q9UKP4 1686 aa12.84□□□□□ -0.35
LINC01138-204ENST00000613452 BTBD11A6QL63 1104 aa12.84□□□□□ -0.35
LINC01138-204ENST00000613452 U2AF1L5P0DN76 240 aaPredicted RBP12.84□□□□□ -0.35
LINC01138-204ENST00000613452 U2AF1Q01081 240 aaKnown RBP eCLIP12.84□□□□□ -0.35
LINC01138-204ENST00000613452 RTF1Q92541 710 aaKnown RBP12.84□□□□□ -0.35
LINC01138-204ENST00000613452 C4AP0C0L4 1744 aa12.84□□□□□ -0.35
LINC01138-204ENST00000613452 KCPQ6ZWJ8 1503 aa12.83□□□□□ -0.35
LINC01138-204ENST00000613452 COL15A1P39059 1388 aa12.83□□□□□ -0.36
LINC01138-204ENST00000613452 KIF3CO14782 793 aa12.83□□□□□ -0.36
LINC01138-204ENST00000613452 CNGB1Q14028 1251 aaPredicted RBP12.83□□□□□ -0.36
LINC01138-204ENST00000613452 NPM2Q86SE8 214 aaKnown RBP12.83□□□□□ -0.36
LINC01138-204ENST00000613452 RGL2O15211 777 aa12.82□□□□□ -0.36
LINC01138-204ENST00000613452 PNNQ9H307 717 aaKnown RBP12.82□□□□□ -0.36
LINC01138-204ENST00000613452 H0YIN7 160 aa12.81□□□□□ -0.36
LINC01138-204ENST00000613452 TOMM70O94826 608 aa12.81□□□□□ -0.36
LINC01138-204ENST00000613452 SNRPA1P09661 255 aaKnown RBP12.81□□□□□ -0.36
LINC01138-204ENST00000613452 HSPA6P17066 643 aa12.81□□□□□ -0.36
LINC01138-204ENST00000613452 CHRNA5P30532 468 aa12.81□□□□□ -0.36
LINC01138-204ENST00000613452 TAF7Q15545 349 aaPredicted RBP12.81□□□□□ -0.36
LINC01138-204ENST00000613452 C9orf131Q5VYM1 1079 aa12.81□□□□□ -0.36
LINC01138-204ENST00000613452 CLEC4GQ6UXB4 293 aa12.81□□□□□ -0.36
LINC01138-204ENST00000613452 TTLL6Q8N841 843 aa12.81□□□□□ -0.36
LINC01138-204ENST00000613452 ZNF526Q8TF50 670 aaPredicted RBP12.81□□□□□ -0.36
LINC01138-204ENST00000613452 BRIP1Q9BX63 1249 aa12.81□□□□□ -0.36
LINC01138-204ENST00000613452 TJP1Q07157 1748 aa12.81□□□□□ -0.36
LINC01138-204ENST00000613452 A1BGP04217 495 aa12.8□□□□□ -0.36
LINC01138-204ENST00000613452 NEFMP07197 916 aa12.8□□□□□ -0.36
LINC01138-204ENST00000613452 PDE6BP35913 854 aa12.8□□□□□ -0.36
LINC01138-204ENST00000613452 KCNQ3O43525 872 aa12.79□□□□□ -0.36
LINC01138-204ENST00000613452 C2CD5Q86YS7 1000 aa12.79□□□□□ -0.36
LINC01138-204ENST00000613452 PNISRQ8TF01 805 aaKnown RBP12.79□□□□□ -0.36
LINC01138-204ENST00000613452 SETDB2Q96T68 719 aa12.79□□□□□ -0.36
LINC01138-204ENST00000613452 TBC1D2BQ9UPU7 963 aa12.79□□□□□ -0.36
LINC01138-204ENST00000613452 USP16Q9Y5T5 823 aa12.79□□□□□ -0.36
LINC01138-204ENST00000613452 ZC3H4Q9UPT8 1303 aaKnown RBP12.79□□□□□ -0.36
LINC01138-204ENST00000613452 TBC1D9BQ66K14 1250 aa12.78□□□□□ -0.36
LINC01138-204ENST00000613452 KIAA1551Q9HCM1 1747 aa12.78□□□□□ -0.36
LINC01138-204ENST00000613452 KDM2BQ8NHM5 1336 aa12.78□□□□□ -0.36
LINC01138-204ENST00000613452 CAMTA2O94983 1202 aa12.77□□□□□ -0.37
LINC01138-204ENST00000613452 MCM10Q7L590 875 aa12.77□□□□□ -0.37
LINC01138-204ENST00000613452 N4BP2Q86UW6 1770 aaPredicted RBP12.76□□□□□ -0.37
LINC01138-204ENST00000613452 LMNB1P20700 586 aa12.76□□□□□ -0.37
LINC01138-204ENST00000613452 BICDL1Q6ZP65 573 aa12.76□□□□□ -0.37
LINC01138-204ENST00000613452 DZIP3Q86Y13 1208 aaKnown RBP12.76□□□□□ -0.37
LINC01138-204ENST00000613452 RBM46Q8TBY0 533 aaKnown RBP12.76□□□□□ -0.37
LINC01138-204ENST00000613452 PLEKHF1Q96S99 279 aa12.76□□□□□ -0.37
LINC01138-204ENST00000613452 RNF181Q9P0P0 153 aa12.76□□□□□ -0.37
LINC01138-204ENST00000613452 APLP1P51693 650 aa12.75□□□□□ -0.37
LINC01138-204ENST00000613452 FSTL1Q12841 308 aa12.75□□□□□ -0.37
LINC01138-204ENST00000613452 RALBP1Q15311 655 aa12.75□□□□□ -0.37
LINC01138-204ENST00000613452 PRR5LQ6MZQ0 368 aa12.75□□□□□ -0.37
LINC01138-204ENST00000613452 CARMIL3Q8ND23 1372 aa12.75□□□□□ -0.37
LINC01138-204ENST00000613452 CNKSR1Q969H4 720 aa12.75□□□□□ -0.37
LINC01138-204ENST00000613452 ZNF652Q9Y2D9 606 aa12.75□□□□□ -0.37
LINC01138-204ENST00000613452 CEP350Q5VT06 3117 aa12.75□□□□□ -0.37
LINC01138-204ENST00000613452 UBR2Q8IWV8 1755 aa12.74□□□□□ -0.37
LINC01138-204ENST00000613452 KLRG2A4D1S0 409 aaPredicted RBP12.74□□□□□ -0.37
LINC01138-204ENST00000613452 ST5P78524 1137 aa12.74□□□□□ -0.37
LINC01138-204ENST00000613452 STYK1Q6J9G0 422 aa12.74□□□□□ -0.37
LINC01138-204ENST00000613452 TPTE2Q6XPS3 522 aa12.74□□□□□ -0.37
LINC01138-204ENST00000613452 NMRK2Q9NPI5 230 aa12.74□□□□□ -0.37
LINC01138-204ENST00000613452 GLTPD2A6NH11 291 aa12.73□□□□□ -0.37
LINC01138-204ENST00000613452 DCTN1Q14203 1278 aa12.73□□□□□ -0.37
LINC01138-204ENST00000613452 NFE2L2Q16236 605 aa12.73□□□□□ -0.37
LINC01138-204ENST00000613452 SOGA3Q5TF21 947 aa12.73□□□□□ -0.37
LINC01138-204ENST00000613452 C16orf71Q8IYS4 520 aaPredicted RBP12.73□□□□□ -0.37
LINC01138-204ENST00000613452 CNBD1Q8NA66 436 aa12.73□□□□□ -0.37
LINC01138-204ENST00000613452 ZNF622Q969S3 477 aaKnown RBP eCLIP12.73□□□□□ -0.37
LINC01138-204ENST00000613452 MASTLQ96GX5 879 aa12.73□□□□□ -0.37
LINC01138-204ENST00000613452 BABAM1Q9NWV8 329 aa12.73□□□□□ -0.37
LINC01138-204ENST00000613452 ZNF330Q9Y3S2 320 aaPredicted RBP12.73□□□□□ -0.37
LINC01138-204ENST00000613452 ARFGEF1Q9Y6D6 1849 aa12.73□□□□□ -0.37
LINC01138-204ENST00000613452 NRXN2Q9P2S2 1712 aa12.73□□□□□ -0.37
LINC01138-204ENST00000613452 BRCA1P38398 1863 aaKnown RBP12.72□□□□□ -0.37
LINC01138-204ENST00000613452 NBPF26B4DH59 902 aa12.72□□□□□ -0.37
LINC01138-204ENST00000613452 ERVV-1B6SEH8 477 aa12.72□□□□□ -0.37
LINC01138-204ENST00000613452 SRGNP10124 158 aa12.72□□□□□ -0.37
LINC01138-204ENST00000613452 VEGFAP15692 232 aaPredicted RBP12.72□□□□□ -0.37
LINC01138-204ENST00000613452 DPY19L2Q6NUT2 758 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms