RNA–Protein interactions for RNA: ENST00000613104.1

ATF3-210, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best) BASIC

Gene ATF3, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-210ENST00000613104 SLC4A9Q96Q91 983 aa12.08□□□□□ -0.48
ATF3-210ENST00000613104 C5P01031 1676 aa12.07□□□□□ -0.48
ATF3-210ENST00000613104 RREB1Q92766 1687 aa12.07□□□□□ -0.48
ATF3-210ENST00000613104 TAF1LQ8IZX4 1826 aa12.07□□□□□ -0.48
ATF3-210ENST00000613104 PTCD1O75127 700 aaKnown RBP12.07□□□□□ -0.48
ATF3-210ENST00000613104 COL5A3P25940 1745 aaPredicted RBP12.07□□□□□ -0.48
ATF3-210ENST00000613104 BAG6P46379 1132 aa12.07□□□□□ -0.48
ATF3-210ENST00000613104 DUSP27Q5VZP5 1158 aa12.07□□□□□ -0.48
ATF3-210ENST00000613104 CAMKK2Q96RR4 588 aa12.07□□□□□ -0.48
ATF3-210ENST00000613104 RBM42Q9BTD8 480 aaKnown RBP12.07□□□□□ -0.48
ATF3-210ENST00000613104 LAMB4A4D0S4 1761 aa12.07□□□□□ -0.48
ATF3-210ENST00000613104 GIGYF1O75420 1035 aaPredicted RBP12.06□□□□□ -0.48
ATF3-210ENST00000613104 TXNRD1Q16881 649 aa12.06□□□□□ -0.48
ATF3-210ENST00000613104 SLC27A3Q5K4L6 730 aa12.06□□□□□ -0.48
ATF3-210ENST00000613104 SNRPA1P09661 255 aaKnown RBP12.05□□□□□ -0.48
ATF3-210ENST00000613104 ATP6V1AP38606 617 aa12.05□□□□□ -0.48
ATF3-210ENST00000613104 EN1Q05925 392 aaPredicted RBP12.05□□□□□ -0.48
ATF3-210ENST00000613104 ITPK1Q13572 414 aa12.05□□□□□ -0.48
ATF3-210ENST00000613104 EZH2Q15910 746 aaKnown RBP12.05□□□□□ -0.48
ATF3-210ENST00000613104 KRT24Q2M2I5 525 aa12.05□□□□□ -0.48
ATF3-210ENST00000613104 DEFB132Q7Z7B7 95 aa12.05□□□□□ -0.48
ATF3-210ENST00000613104 CCNL1Q9UK58 526 aaPredicted RBP12.05□□□□□ -0.48
ATF3-210ENST00000613104 SOS1Q07889 1333 aaPredicted RBP12.05□□□□□ -0.48
ATF3-210ENST00000613104 NUP188Q5SRE5 1749 aa12.04□□□□□ -0.48
ATF3-210ENST00000613104 HOXB7P09629 217 aa12.04□□□□□ -0.48
ATF3-210ENST00000613104 VASPP50552 380 aaPredicted RBP12.04□□□□□ -0.48
ATF3-210ENST00000613104 EXOSC9Q06265 439 aaKnown RBP12.04□□□□□ -0.48
ATF3-210ENST00000613104 DNAJC10Q8IXB1 793 aa12.04□□□□□ -0.48
ATF3-210ENST00000613104 C8orf58Q8NAV2 365 aa12.04□□□□□ -0.48
ATF3-210ENST00000613104 TEX13AQ9BXU3 409 aaPredicted RBP12.04□□□□□ -0.48
ATF3-210ENST00000613104 LRRC4BQ9NT99 713 aa12.04□□□□□ -0.48
ATF3-210ENST00000613104 PRAMEF22A3QJZ6 481 aa12.03□□□□□ -0.48
ATF3-210ENST00000613104 HMGB2P26583 209 aaKnown RBP12.03□□□□□ -0.48
ATF3-210ENST00000613104 TSPYL6Q8N831 410 aa12.03□□□□□ -0.48
ATF3-210ENST00000613104 USP16Q9Y5T5 823 aa12.03□□□□□ -0.48
ATF3-210ENST00000613104 C4BP0C0L5 1744 aa12.03□□□□□ -0.48
ATF3-210ENST00000613104 MYH14Q7Z406 1995 aaKnown RBP12.02□□□□□ -0.49
ATF3-210ENST00000613104 VAMP4O75379 141 aa12.02□□□□□ -0.49
ATF3-210ENST00000613104 CYP19A1P11511 503 aaPredicted RBP12.02□□□□□ -0.49
ATF3-210ENST00000613104 KCNQ4P56696 695 aa12.02□□□□□ -0.49
ATF3-210ENST00000613104 LINC00116Q8NCU8 138 aa12.02□□□□□ -0.49
ATF3-210ENST00000613104 CT47B1P0C2W7 299 aaPredicted RBP12.01□□□□□ -0.49
ATF3-210ENST00000613104 TWISTNBQ3B726 338 aaPredicted RBP12.01□□□□□ -0.49
ATF3-210ENST00000613104 CNTNAP4Q9C0A0 1308 aa12.01□□□□□ -0.49
ATF3-210ENST00000613104 EP400Q96L91 3159 aa12□□□□□ -0.49
ATF3-210ENST00000613104 ELL2O00472 640 aaPredicted RBP12□□□□□ -0.49
ATF3-210ENST00000613104 STARD3NLO95772 234 aa12□□□□□ -0.49
ATF3-210ENST00000613104 RC3H1Q5TC82 1133 aaKnown RBP12□□□□□ -0.49
ATF3-210ENST00000613104 SSUH2Q9Y2M2 353 aa12□□□□□ -0.49
ATF3-210ENST00000613104 ERBB4Q15303 1308 aa12□□□□□ -0.49
ATF3-210ENST00000613104 CACNA1FO60840 1977 aa11.99□□□□□ -0.49
ATF3-210ENST00000613104 CRKLP46109 303 aaKnown RBP11.99□□□□□ -0.49
ATF3-210ENST00000613104 INTS5Q6P9B9 1019 aaKnown RBP11.99□□□□□ -0.49
ATF3-210ENST00000613104 AKT1S1Q96B36 256 aa11.99□□□□□ -0.49
ATF3-210ENST00000613104 CHMP4AQ9BY43 222 aa11.99□□□□□ -0.49
ATF3-210ENST00000613104 UBR3Q6ZT12 1888 aa11.99□□□□□ -0.49
ATF3-210ENST00000613104 QSER1Q2KHR3 1735 aa11.98□□□□□ -0.49
ATF3-210ENST00000613104 EIF2S2P20042 333 aaKnown RBP11.98□□□□□ -0.49
ATF3-210ENST00000613104 PDIA6Q15084 440 aa11.98□□□□□ -0.49
ATF3-210ENST00000613104 HDGFL1Q5TGJ6 251 aa11.98□□□□□ -0.49
ATF3-210ENST00000613104 ZNF428Q96B54 188 aa11.98□□□□□ -0.49
ATF3-210ENST00000613104 CCDC87Q9NVE4 849 aa11.98□□□□□ -0.49
ATF3-210ENST00000613104 ZBTB1Q9Y2K1 713 aa11.98□□□□□ -0.49
ATF3-210ENST00000613104 TUBGCP6Q96RT7 1819 aa11.97□□□□□ -0.49
ATF3-210ENST00000613104 NBPF26B4DH59 902 aa11.97□□□□□ -0.49
ATF3-210ENST00000613104 A1BGP04217 495 aa11.97□□□□□ -0.49
ATF3-210ENST00000613104 NBPF14Q5TI25 921 aa11.97□□□□□ -0.49
ATF3-210ENST00000613104 CCDC30Q5VVM6 783 aa11.97□□□□□ -0.49
ATF3-210ENST00000613104 NBPF10Q6P3W6 841 aaKnown RBP11.97□□□□□ -0.49
ATF3-210ENST00000613104 NBPF15Q8N660 670 aa11.97□□□□□ -0.49
ATF3-210ENST00000613104 RPS6KA4O75676 772 aa11.96□□□□□ -0.49
ATF3-210ENST00000613104 IL6STP40189 918 aaPredicted RBP11.96□□□□□ -0.49
ATF3-210ENST00000613104 ZNF827Q17R98 1081 aa11.96□□□□□ -0.49
ATF3-210ENST00000613104 LRP10Q7Z4F1 713 aa11.96□□□□□ -0.49
ATF3-210ENST00000613104 NECTIN2Q92692 538 aa11.96□□□□□ -0.49
ATF3-210ENST00000613104 ANO8Q9HCE9 1232 aaPredicted RBP11.96□□□□□ -0.49
ATF3-210ENST00000613104 DDX21Q9NR30 783 aaKnown RBP eCLIP11.96□□□□□ -0.49
ATF3-210ENST00000613104 DBF4Q9UBU7 674 aaPredicted RBP11.96□□□□□ -0.49
ATF3-210ENST00000613104 CANXP27824 592 aaKnown RBP11.95□□□□□ -0.5
ATF3-210ENST00000613104 EIF5P55010 431 aaKnown RBP11.95□□□□□ -0.5
ATF3-210ENST00000613104 SLC15A2Q16348 729 aa11.95□□□□□ -0.5
ATF3-210ENST00000613104 ALDH1L2Q3SY69 923 aa11.95□□□□□ -0.5
ATF3-210ENST00000613104 AK7Q96M32 723 aa11.95□□□□□ -0.5
ATF3-210ENST00000613104 STK32BQ9NY57 414 aa11.95□□□□□ -0.5
ATF3-210ENST00000613104 CHPF2Q9P2E5 772 aa11.95□□□□□ -0.5
ATF3-210ENST00000613104 GNPATO15228 680 aa11.94□□□□□ -0.5
ATF3-210ENST00000613104 PIP4K2AP48426 406 aaPredicted RBP11.94□□□□□ -0.5
ATF3-210ENST00000613104 RARSP54136 660 aaKnown RBP11.94□□□□□ -0.5
ATF3-210ENST00000613104 PROSER3Q2NL68 480 aa11.94□□□□□ -0.5
ATF3-210ENST00000613104 AMIGO3Q86WK7 504 aa11.94□□□□□ -0.5
ATF3-210ENST00000613104 RTCBQ9Y3I0 505 aaKnown RBP11.94□□□□□ -0.5
ATF3-210ENST00000613104 C4AP0C0L4 1744 aa11.94□□□□□ -0.5
ATF3-210ENST00000613104 TCERG1O14776 1098 aaKnown RBP11.93□□□□□ -0.5
ATF3-210ENST00000613104 ANXA1P04083 346 aa11.93□□□□□ -0.5
ATF3-210ENST00000613104 MYL6BP14649 208 aa11.93□□□□□ -0.5
ATF3-210ENST00000613104 SSFA2P28290 1259 aa11.93□□□□□ -0.5
ATF3-210ENST00000613104 BRPF1P55201 1214 aaPredicted RBP11.93□□□□□ -0.5
ATF3-210ENST00000613104 MRPL50Q8N5N7 158 aaKnown RBP11.93□□□□□ -0.5
ATF3-210ENST00000613104 SSH1Q8WYL5 1049 aa11.93□□□□□ -0.5
ATF3-210ENST00000613104 STK31Q9BXU1 1019 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms