RNA–Protein interactions for RNA: ENST00000613060.4

SLC6A6-204, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best) BASIC

Gene SLC6A6, Length 6,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-204ENST00000613060 TOM1O60784 492 aa13.95□□□□□ -0.18
SLC6A6-204ENST00000613060 PRPF40AO75400 957 aaKnown RBP13.95□□□□□ -0.18
SLC6A6-204ENST00000613060 GPTP24298 496 aa13.95□□□□□ -0.18
SLC6A6-204ENST00000613060 CETN1Q12798 172 aa13.95□□□□□ -0.18
SLC6A6-204ENST00000613060 ARHGAP29Q52LW3 1261 aa13.95□□□□□ -0.18
SLC6A6-204ENST00000613060 EXOC5O00471 708 aa13.94□□□□□ -0.18
SLC6A6-204ENST00000613060 XRCC6P12956 609 aaKnown RBP eCLIP13.94□□□□□ -0.18
SLC6A6-204ENST00000613060 TMEM266Q2M3C6 531 aa13.94□□□□□ -0.18
SLC6A6-204ENST00000613060 SPATA32Q96LK8 384 aa13.94□□□□□ -0.18
SLC6A6-204ENST00000613060 FGFR1OPO95684 399 aaKnown RBP13.94□□□□□ -0.18
SLC6A6-204ENST00000613060 SPATA24Q86W54 205 aa13.94□□□□□ -0.18
SLC6A6-204ENST00000613060 CCDC89Q8N998 374 aa13.94□□□□□ -0.18
SLC6A6-204ENST00000613060 PHACTR2O75167 634 aa13.94□□□□□ -0.18
SLC6A6-204ENST00000613060 CCDC178Q5BJE1 867 aa13.94□□□□□ -0.18
SLC6A6-204ENST00000613060 BLOC1S2Q6QNY1 142 aa13.94□□□□□ -0.18
SLC6A6-204ENST00000613060 DDX46Q7L014 1031 aaKnown RBP13.94□□□□□ -0.18
SLC6A6-204ENST00000613060 SPC24Q8NBT2 197 aa13.94□□□□□ -0.18
SLC6A6-204ENST00000613060 WDR33Q9C0J8 1336 aaKnown RBP13.94□□□□□ -0.18
SLC6A6-204ENST00000613060 GCOM1H8Y6P7 765 aaPredicted RBP13.94□□□□□ -0.18
SLC6A6-204ENST00000613060 MYZAPP0CAP1 466 aa13.94□□□□□ -0.18
SLC6A6-204ENST00000613060 PRKRIP1Q9H875 184 aaPredicted RBP13.94□□□□□ -0.18
SLC6A6-204ENST00000613060 LARP1BQ659C4 914 aaKnown RBP13.93□□□□□ -0.18
SLC6A6-204ENST00000613060 TIGD1Q96MW7 591 aa13.93□□□□□ -0.18
SLC6A6-204ENST00000613060 ALS2CR12Q96Q35 445 aa13.93□□□□□ -0.18
SLC6A6-204ENST00000613060 SLC4A2P04920 1241 aa13.93□□□□□ -0.18
SLC6A6-204ENST00000613060 CCDC82Q8N4S0 544 aa13.93□□□□□ -0.18
SLC6A6-204ENST00000613060 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.93□□□□□ -0.18
SLC6A6-204ENST00000613060 RIMBP2O15034 1052 aa13.93□□□□□ -0.18
SLC6A6-204ENST00000613060 AACSQ86V21 672 aa13.93□□□□□ -0.18
SLC6A6-204ENST00000613060 FHOD3Q2V2M9 1422 aa13.93□□□□□ -0.18
SLC6A6-204ENST00000613060 ZSCAN31Q96LW9 406 aaPredicted RBP13.93□□□□□ -0.18
SLC6A6-204ENST00000613060 ZBTB21Q9ULJ3 1066 aa13.93□□□□□ -0.18
SLC6A6-204ENST00000613060 GINS2Q9Y248 185 aa13.93□□□□□ -0.18
SLC6A6-204ENST00000613060 IFIT1P09914 478 aaKnown RBP13.93□□□□□ -0.18
SLC6A6-204ENST00000613060 PRKAR2BP31323 418 aa13.93□□□□□ -0.18
SLC6A6-204ENST00000613060 TCIRG1Q13488 830 aa13.93□□□□□ -0.18
SLC6A6-204ENST00000613060 CACNA2D4Q7Z3S7 1137 aa13.93□□□□□ -0.18
SLC6A6-204ENST00000613060 HLA-DOAP06340 250 aa13.92□□□□□ -0.18
SLC6A6-204ENST00000613060 TTC30BQ8N4P2 665 aa13.92□□□□□ -0.18
SLC6A6-204ENST00000613060 HINFPQ9BQA5 517 aa13.92□□□□□ -0.18
SLC6A6-204ENST00000613060 WAPLQ7Z5K2 1190 aa13.92□□□□□ -0.18
SLC6A6-204ENST00000613060 PANK1Q8TE04 598 aa13.92□□□□□ -0.18
SLC6A6-204ENST00000613060 PHAXQ9H814 394 aaKnown RBP13.92□□□□□ -0.18
SLC6A6-204ENST00000613060 CCDC102AQ96A19 550 aa13.92□□□□□ -0.18
SLC6A6-204ENST00000613060 ZNF692Q9BU19 519 aaPredicted RBP13.92□□□□□ -0.18
SLC6A6-204ENST00000613060 UPF3BQ9BZI7 483 aaKnown RBP13.92□□□□□ -0.18
SLC6A6-204ENST00000613060 GBP3Q9H0R5 595 aa13.91□□□□□ -0.18
SLC6A6-204ENST00000613060 AKAP2Q9Y2D5 859 aa13.91□□□□□ -0.18
SLC6A6-204ENST00000613060 BAG4O95429 457 aaKnown RBP13.91□□□□□ -0.18
SLC6A6-204ENST00000613060 TRMT112Q9UI30 125 aaKnown RBP13.91□□□□□ -0.18
SLC6A6-204ENST00000613060 TTC21AQ8NDW8 1320 aa13.91□□□□□ -0.18
SLC6A6-204ENST00000613060 DMRT2Q9Y5R5 561 aa13.91□□□□□ -0.18
SLC6A6-204ENST00000613060 PDIA4P13667 645 aaKnown RBP13.91□□□□□ -0.18
SLC6A6-204ENST00000613060 TSHZ2Q9NRE2 1034 aa13.91□□□□□ -0.18
SLC6A6-204ENST00000613060 PSMC4P43686 418 aa13.9□□□□□ -0.18
SLC6A6-204ENST00000613060 ANO3Q9BYT9 981 aa13.9□□□□□ -0.18
SLC6A6-204ENST00000613060 TAOK3Q9H2K8 898 aa13.9□□□□□ -0.18
SLC6A6-204ENST00000613060 PPP6R1Q9UPN7 881 aa13.9□□□□□ -0.18
SLC6A6-204ENST00000613060 STXBP4Q6ZWJ1 553 aa13.9□□□□□ -0.18
SLC6A6-204ENST00000613060 CTCFLQ8NI51 663 aaPredicted RBP13.9□□□□□ -0.18
SLC6A6-204ENST00000613060 TCHPQ9BT92 498 aa13.9□□□□□ -0.18
SLC6A6-204ENST00000613060 SNX16P57768 344 aa13.9□□□□□ -0.18
SLC6A6-204ENST00000613060 CCDC196A0A1B0GTZ2 297 aa13.9□□□□□ -0.18
SLC6A6-204ENST00000613060 IFFO1Q0D2I5 559 aa13.9□□□□□ -0.18
SLC6A6-204ENST00000613060 LUZP1Q86V48 1076 aa13.9□□□□□ -0.18
SLC6A6-204ENST00000613060 GIMAP7Q8NHV1 300 aa13.9□□□□□ -0.18
SLC6A6-204ENST00000613060 RNF34Q969K3 372 aa13.9□□□□□ -0.18
SLC6A6-204ENST00000613060 CRACR2AQ9BSW2 395 aa13.9□□□□□ -0.18
SLC6A6-204ENST00000613060 ACTN2P35609 894 aa13.9□□□□□ -0.18
SLC6A6-204ENST00000613060 FAM47CQ5HY64 1035 aa13.9□□□□□ -0.18
SLC6A6-204ENST00000613060 PDRG1Q9NUG6 133 aa13.9□□□□□ -0.18
SLC6A6-204ENST00000613060 FNDC3AQ9Y2H6 1198 aaKnown RBP13.9□□□□□ -0.18
SLC6A6-204ENST00000613060 ADRA2BP18089 450 aa13.89□□□□□ -0.19
SLC6A6-204ENST00000613060 GJC1P36383 396 aa13.89□□□□□ -0.19
SLC6A6-204ENST00000613060 CUL4BQ13620 913 aa13.89□□□□□ -0.19
SLC6A6-204ENST00000613060 TCERG1LQ5VWI1 586 aa13.89□□□□□ -0.19
SLC6A6-204ENST00000613060 RAPGEF2Q9Y4G8 1499 aa13.88□□□□□ -0.19
SLC6A6-204ENST00000613060 BMS1Q14692 1282 aaKnown RBP13.88□□□□□ -0.19
SLC6A6-204ENST00000613060 NBPF6Q5VWK0 638 aa13.88□□□□□ -0.19
SLC6A6-204ENST00000613060 NBPF5PQ86XG9 351 aaPredicted RBP13.88□□□□□ -0.19
SLC6A6-204ENST00000613060 NBPF4Q96M43 638 aa13.88□□□□□ -0.19
SLC6A6-204ENST00000613060 C1orf115Q9H7X2 142 aa13.88□□□□□ -0.19
SLC6A6-204ENST00000613060 STK32BQ9NY57 414 aa13.88□□□□□ -0.19
SLC6A6-204ENST00000613060 SREK1Q8WXA9 508 aaKnown RBP13.88□□□□□ -0.19
SLC6A6-204ENST00000613060 PFDN4Q9NQP4 134 aa13.88□□□□□ -0.19
SLC6A6-204ENST00000613060 SHTN1A0MZ66 631 aa13.88□□□□□ -0.19
SLC6A6-204ENST00000613060 PPP1R14CQ8TAE6 165 aa13.87□□□□□ -0.19
SLC6A6-204ENST00000613060 SULT6B1Q6IMI4 303 aa13.87□□□□□ -0.19
SLC6A6-204ENST00000613060 TRAK2O60296 914 aa13.87□□□□□ -0.19
SLC6A6-204ENST00000613060 CFAP57Q96MR6 1250 aa13.87□□□□□ -0.19
SLC6A6-204ENST00000613060 FSD2A1L4K1 749 aa13.87□□□□□ -0.19
SLC6A6-204ENST00000613060 CLGNO14967 610 aa13.87□□□□□ -0.19
SLC6A6-204ENST00000613060 GNL1P36915 607 aaPredicted RBP13.87□□□□□ -0.19
SLC6A6-204ENST00000613060 CCDC174Q6PII3 467 aa13.87□□□□□ -0.19
SLC6A6-204ENST00000613060 MCM3P25205 808 aa13.86□□□□□ -0.19
SLC6A6-204ENST00000613060 IVNS1ABPQ9Y6Y0 642 aa13.86□□□□□ -0.19
SLC6A6-204ENST00000613060 ABL1P00519 1130 aa13.86□□□□□ -0.19
SLC6A6-204ENST00000613060 CFAP100Q494V2 611 aa13.86□□□□□ -0.19
SLC6A6-204ENST00000613060 MAP9Q49MG5 647 aa13.86□□□□□ -0.19
SLC6A6-204ENST00000613060 IQCA1Q86XH1 822 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 508.3 ms