RNA–Protein interactions for RNA: ENST00000612292.1

MMP28-202, Transcript of matrix metallopeptidase 28, humanhuman

TSL 5

Gene MMP28, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-202ENST00000612292 TAF7Q15545 349 aaPredicted RBP24.45■■□□□ 1.5
MMP28-202ENST00000612292 GPR162Q16538 588 aa24.44■■□□□ 1.5
MMP28-202ENST00000612292 GOLGB1Q14789 3259 aaKnown RBP24.44■■□□□ 1.5
MMP28-202ENST00000612292 FKBP8Q14318 412 aa24.43■■□□□ 1.5
MMP28-202ENST00000612292 EIF5P55010 431 aaKnown RBP24.42■■□□□ 1.5
MMP28-202ENST00000612292 KIF13BQ9NQT8 1826 aa24.41■■□□□ 1.5
MMP28-202ENST00000612292 YY1P25490 414 aa24.41■■□□□ 1.5
MMP28-202ENST00000612292 CANXP27824 592 aaKnown RBP24.41■■□□□ 1.5
MMP28-202ENST00000612292 TM4SF1P30408 202 aa24.41■■□□□ 1.5
MMP28-202ENST00000612292 NARFQ9UHQ1 456 aa24.41■■□□□ 1.5
MMP28-202ENST00000612292 USP16Q9Y5T5 823 aa24.41■■□□□ 1.5
MMP28-202ENST00000612292 CHD4Q14839 1912 aa24.41■■□□□ 1.5
MMP28-202ENST00000612292 MAPK8IP3Q9UPT6 1336 aa24.4■■□□□ 1.5
MMP28-202ENST00000612292 USPL1Q5W0Q7 1092 aa24.4■■□□□ 1.5
MMP28-202ENST00000612292 COL15A1P39059 1388 aa24.4■■□□□ 1.5
MMP28-202ENST00000612292 ZPR1O75312 459 aa24.39■■□□□ 1.49
MMP28-202ENST00000612292 A1BGP04217 495 aa24.39■■□□□ 1.49
MMP28-202ENST00000612292 YBX3P16989 372 aaKnown RBP eCLIP24.39■■□□□ 1.49
MMP28-202ENST00000612292 MIS18AQ9NYP9 233 aa24.39■■□□□ 1.49
MMP28-202ENST00000612292 PARP3Q9Y6F1 533 aa24.39■■□□□ 1.49
MMP28-202ENST00000612292 PRAMEF22A3QJZ6 481 aa24.38■■□□□ 1.49
MMP28-202ENST00000612292 ZNF316A6NFI3 1004 aaPredicted RBP24.38■■□□□ 1.49
MMP28-202ENST00000612292 BCL2L12Q9HB09 334 aa24.38■■□□□ 1.49
MMP28-202ENST00000612292 SNRPA1P09661 255 aaKnown RBP24.37■■□□□ 1.49
MMP28-202ENST00000612292 THUMPD2Q9BTF0 503 aaKnown RBP24.37■■□□□ 1.49
MMP28-202ENST00000612292 ADAMTS8Q9UP79 889 aa24.37■■□□□ 1.49
MMP28-202ENST00000612292 IL6STP40189 918 aaPredicted RBP24.36■■□□□ 1.49
MMP28-202ENST00000612292 TMPOP42166 694 aaKnown RBP24.36■■□□□ 1.49
MMP28-202ENST00000612292 RIPK4P57078 832 aa24.36■■□□□ 1.49
MMP28-202ENST00000612292 DDR1Q08345 913 aa24.36■■□□□ 1.49
MMP28-202ENST00000612292 PELP1Q8IZL8 1130 aaKnown RBP24.36■■□□□ 1.49
MMP28-202ENST00000612292 PNISRQ8TF01 805 aaKnown RBP24.36■■□□□ 1.49
MMP28-202ENST00000612292 TGFB2P61812 414 aa24.35■■□□□ 1.49
MMP28-202ENST00000612292 A0A087WZG4 1122 aa24.34■■□□□ 1.49
MMP28-202ENST00000612292 POLRMTO00411 1230 aaKnown RBP24.34■■□□□ 1.49
MMP28-202ENST00000612292 KIAA1551Q9HCM1 1747 aa24.34■■□□□ 1.49
MMP28-202ENST00000612292 KDM3BQ7LBC6 1761 aa24.34■■□□□ 1.49
MMP28-202ENST00000612292 GRIN3BO60391 1043 aa24.33■■□□□ 1.49
MMP28-202ENST00000612292 RUNDC1Q96C34 613 aa24.33■■□□□ 1.49
MMP28-202ENST00000612292 C10orf71Q711Q0 1435 aa24.33■■□□□ 1.49
MMP28-202ENST00000612292 NFIXQ14938 502 aa24.32■■□□□ 1.48
MMP28-202ENST00000612292 WDR43Q15061 677 aaKnown RBP eCLIP24.32■■□□□ 1.48
MMP28-202ENST00000612292 CCDC146Q8IYE0 955 aa24.32■■□□□ 1.48
MMP28-202ENST00000612292 N4BP2Q86UW6 1770 aaPredicted RBP24.31■■□□□ 1.48
MMP28-202ENST00000612292 EIF4A1P60842 406 aaKnown RBP24.31■■□□□ 1.48
MMP28-202ENST00000612292 TBC1D2BQ9UPU7 963 aa24.31■■□□□ 1.48
MMP28-202ENST00000612292 PXDNLA1KZ92 1463 aa24.3■■□□□ 1.48
MMP28-202ENST00000612292 AFDNP55196 1824 aaKnown RBP24.3■■□□□ 1.48
MMP28-202ENST00000612292 A0A0G2JLW4 131 aa24.29■■□□□ 1.48
MMP28-202ENST00000612292 GIGYF1O75420 1035 aaPredicted RBP24.29■■□□□ 1.48
MMP28-202ENST00000612292 NBPF26B4DH59 902 aa24.28■■□□□ 1.48
MMP28-202ENST00000612292 KCNA3P22001 575 aa24.28■■□□□ 1.48
MMP28-202ENST00000612292 PIP4K2AP48426 406 aaPredicted RBP24.28■■□□□ 1.48
MMP28-202ENST00000612292 NBPF10Q6P3W6 841 aaKnown RBP24.28■■□□□ 1.48
MMP28-202ENST00000612292 NBPF15Q8N660 670 aa24.28■■□□□ 1.48
MMP28-202ENST00000612292 RRP7AQ9Y3A4 280 aaKnown RBP24.28■■□□□ 1.48
MMP28-202ENST00000612292 NRXN2Q9P2S2 1712 aa24.27■■□□□ 1.48
MMP28-202ENST00000612292 DPEP1P16444 411 aa24.27■■□□□ 1.48
MMP28-202ENST00000612292 LMOD3Q0VAK6 560 aa24.27■■□□□ 1.48
MMP28-202ENST00000612292 BABAM1Q9NWV8 329 aa24.27■■□□□ 1.48
MMP28-202ENST00000612292 TRIM35Q9UPQ4 493 aa24.27■■□□□ 1.48
MMP28-202ENST00000612292 ZNF330Q9Y3S2 320 aaPredicted RBP24.27■■□□□ 1.48
MMP28-202ENST00000612292 CAMTA2O94983 1202 aa24.26■■□□□ 1.47
MMP28-202ENST00000612292 NEUROD2Q15784 382 aa24.26■■□□□ 1.47
MMP28-202ENST00000612292 SERPINB2P05120 415 aa24.25■■□□□ 1.47
MMP28-202ENST00000612292 CCDC184Q52MB2 194 aa24.25■■□□□ 1.47
MMP28-202ENST00000612292 TBC1D9BQ66K14 1250 aa24.25■■□□□ 1.47
MMP28-202ENST00000612292 WWC3Q9ULE0 1092 aa24.25■■□□□ 1.47
MMP28-202ENST00000612292 BRCA1P38398 1863 aaKnown RBP24.25■■□□□ 1.47
MMP28-202ENST00000612292 DZIP3Q86Y13 1208 aaKnown RBP24.24■■□□□ 1.47
MMP28-202ENST00000612292 NPM2Q86SE8 214 aaKnown RBP24.23■■□□□ 1.47
MMP28-202ENST00000612292 TSPYL4Q9UJ04 414 aa24.23■■□□□ 1.47
MMP28-202ENST00000612292 SCN7AQ01118 1682 aa24.23■■□□□ 1.47
MMP28-202ENST00000612292 LAMB4A4D0S4 1761 aa24.23■■□□□ 1.47
MMP28-202ENST00000612292 BICDL1Q6ZP65 573 aa24.22■■□□□ 1.47
MMP28-202ENST00000612292 CHL1O00533 1208 aa24.21■■□□□ 1.47
MMP28-202ENST00000612292 CLEC4GQ6UXB4 293 aa24.21■■□□□ 1.47
MMP28-202ENST00000612292 ZNF784Q8NCA9 323 aaPredicted RBP24.21■■□□□ 1.47
MMP28-202ENST00000612292 BCORQ6W2J9 1755 aa24.21■■□□□ 1.47
MMP28-202ENST00000612292 PIM2Q9P1W9 311 aa24.19■■□□□ 1.46
MMP28-202ENST00000612292 RGL2O15211 777 aa24.18■■□□□ 1.46
MMP28-202ENST00000612292 CHRNA5P30532 468 aa24.18■■□□□ 1.46
MMP28-202ENST00000612292 BCS1LQ9Y276 419 aa24.18■■□□□ 1.46
MMP28-202ENST00000612292 APAF1O14727 1248 aa24.17■■□□□ 1.46
MMP28-202ENST00000612292 SETDB2Q96T68 719 aa24.17■■□□□ 1.46
MMP28-202ENST00000612292 ARFGEF1Q9Y6D6 1849 aa24.15■■□□□ 1.46
MMP28-202ENST00000612292 CARMIL3Q8ND23 1372 aa24.15■■□□□ 1.46
MMP28-202ENST00000612292 ANP32CO43423 234 aa24.14■■□□□ 1.45
MMP28-202ENST00000612292 HLFQ16534 295 aa24.14■■□□□ 1.45
MMP28-202ENST00000612292 PRR5LQ6MZQ0 368 aa24.14■■□□□ 1.45
MMP28-202ENST00000612292 ERBB4Q15303 1308 aa24.13■■□□□ 1.45
MMP28-202ENST00000612292 ANKRD31Q8N7Z5 1873 aa24.13■■□□□ 1.45
MMP28-202ENST00000612292 PDIA6Q15084 440 aa24.13■■□□□ 1.45
MMP28-202ENST00000612292 DALRD3Q5D0E6 543 aaKnown RBP24.13■■□□□ 1.45
MMP28-202ENST00000612292 ZNF652Q9Y2D9 606 aa24.13■■□□□ 1.45
MMP28-202ENST00000612292 ERVV-1B6SEH8 477 aa24.12■■□□□ 1.45
MMP28-202ENST00000612292 LRP10Q7Z4F1 713 aa24.12■■□□□ 1.45
MMP28-202ENST00000612292 NGEFQ8N5V2 710 aa24.12■■□□□ 1.45
MMP28-202ENST00000612292 CFAP44Q96MT7 982 aa24.12■■□□□ 1.45
MMP28-202ENST00000612292 BRIP1Q9BX63 1249 aa24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms