RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 CABP4P57796 275 aa12.82□□□□□ -0.36
CDC42EP3-206ENST00000611976 CEP85Q6P2H3 762 aa12.82□□□□□ -0.36
CDC42EP3-206ENST00000611976 CEP89Q96ST8 783 aa12.82□□□□□ -0.36
CDC42EP3-206ENST00000611976 DMRT2Q9Y5R5 561 aa12.82□□□□□ -0.36
CDC42EP3-206ENST00000611976 PPIP5K1Q6PFW1 1433 aa12.82□□□□□ -0.36
CDC42EP3-206ENST00000611976 PPP1R42Q7Z4L9 355 aa12.81□□□□□ -0.36
CDC42EP3-206ENST00000611976 CGNQ9P2M7 1197 aaKnown RBP12.81□□□□□ -0.36
CDC42EP3-206ENST00000611976 TAF3Q5VWG9 929 aa12.81□□□□□ -0.36
CDC42EP3-206ENST00000611976 PPFIBP1Q86W92 1011 aa12.81□□□□□ -0.36
CDC42EP3-206ENST00000611976 INTS4Q96HW7 963 aaKnown RBP12.81□□□□□ -0.36
CDC42EP3-206ENST00000611976 BOLA2Q9H3K6 86 aa12.81□□□□□ -0.36
CDC42EP3-206ENST00000611976 TXLNAP40222 546 aa12.81□□□□□ -0.36
CDC42EP3-206ENST00000611976 USP26Q9BXU7 913 aa12.81□□□□□ -0.36
CDC42EP3-206ENST00000611976 OFD1O75665 1012 aa12.81□□□□□ -0.36
CDC42EP3-206ENST00000611976 SFPQP23246 707 aaKnown RBP eCLIP12.81□□□□□ -0.36
CDC42EP3-206ENST00000611976 IMMTQ16891 758 aaKnown RBP12.81□□□□□ -0.36
CDC42EP3-206ENST00000611976 KIF18AQ8NI77 898 aa12.81□□□□□ -0.36
CDC42EP3-206ENST00000611976 HYPKQ9NX55 129 aa12.81□□□□□ -0.36
CDC42EP3-206ENST00000611976 HMG20BQ9P0W2 317 aa12.81□□□□□ -0.36
CDC42EP3-206ENST00000611976 PLXNC1O60486 1568 aa12.81□□□□□ -0.36
CDC42EP3-206ENST00000611976 ATP8B2P98198 1209 aa12.8□□□□□ -0.36
CDC42EP3-206ENST00000611976 CCDC57Q2TAC2 916 aa12.8□□□□□ -0.36
CDC42EP3-206ENST00000611976 TSHZ3Q63HK5 1081 aa12.8□□□□□ -0.36
CDC42EP3-206ENST00000611976 TRMT2AQ8IZ69 625 aaKnown RBP12.8□□□□□ -0.36
CDC42EP3-206ENST00000611976 RHPN1Q8TCX5 695 aa12.8□□□□□ -0.36
CDC42EP3-206ENST00000611976 CEP126Q9P2H0 1117 aa12.8□□□□□ -0.36
CDC42EP3-206ENST00000611976 PRIM1P49642 420 aaKnown RBP12.8□□□□□ -0.36
CDC42EP3-206ENST00000611976 CAGE1Q8TC20 777 aa12.8□□□□□ -0.36
CDC42EP3-206ENST00000611976 PTPRTO14522 1441 aa12.8□□□□□ -0.36
CDC42EP3-206ENST00000611976 KDM5DQ9BY66 1539 aa12.8□□□□□ -0.36
CDC42EP3-206ENST00000611976 NACAP1Q9BZK3 213 aa12.8□□□□□ -0.36
CDC42EP3-206ENST00000611976 CNNM1Q9NRU3 951 aa12.8□□□□□ -0.36
CDC42EP3-206ENST00000611976 POGZQ7Z3K3 1410 aa12.8□□□□□ -0.36
CDC42EP3-206ENST00000611976 CCDC69A6NI79 296 aa12.8□□□□□ -0.36
CDC42EP3-206ENST00000611976 ERLIN1O75477 346 aa12.8□□□□□ -0.36
CDC42EP3-206ENST00000611976 HCLS1P14317 486 aaPredicted RBP12.8□□□□□ -0.36
CDC42EP3-206ENST00000611976 USP48Q86UV5 1035 aa12.8□□□□□ -0.36
CDC42EP3-206ENST00000611976 TSPYL6Q8N831 410 aa12.8□□□□□ -0.36
CDC42EP3-206ENST00000611976 TARBP1Q13395 1621 aaKnown RBP12.8□□□□□ -0.36
CDC42EP3-206ENST00000611976 CEP170Q5SW79 1584 aa12.8□□□□□ -0.36
CDC42EP3-206ENST00000611976 LEKR1Q6ZMV7 388 aa12.79□□□□□ -0.36
CDC42EP3-206ENST00000611976 C16orf71Q8IYS4 520 aaPredicted RBP12.79□□□□□ -0.36
CDC42EP3-206ENST00000611976 WASF1Q92558 559 aa12.79□□□□□ -0.36
CDC42EP3-206ENST00000611976 KDM4AO75164 1064 aa12.79□□□□□ -0.36
CDC42EP3-206ENST00000611976 TNNT1P13805 278 aa12.79□□□□□ -0.36
CDC42EP3-206ENST00000611976 ATP2B1P20020 1258 aa12.79□□□□□ -0.36
CDC42EP3-206ENST00000611976 FKBP4Q02790 459 aaKnown RBP eCLIP12.79□□□□□ -0.36
CDC42EP3-206ENST00000611976 VPS53Q5VIR6 699 aa12.79□□□□□ -0.36
CDC42EP3-206ENST00000611976 CKAP2LQ8IYA6 745 aa12.79□□□□□ -0.36
CDC42EP3-206ENST00000611976 MAGI2Q86UL8 1455 aa12.79□□□□□ -0.36
CDC42EP3-206ENST00000611976 RRAGDQ9NQL2 400 aaPredicted RBP12.79□□□□□ -0.36
CDC42EP3-206ENST00000611976 GSDMDP57764 484 aa12.79□□□□□ -0.36
CDC42EP3-206ENST00000611976 STX1AQ16623 288 aa12.79□□□□□ -0.36
CDC42EP3-206ENST00000611976 ASXL2Q76L83 1435 aa12.79□□□□□ -0.36
CDC42EP3-206ENST00000611976 ATP7AQ04656 1500 aa12.79□□□□□ -0.36
CDC42EP3-206ENST00000611976 UBXN4Q92575 508 aa12.78□□□□□ -0.36
CDC42EP3-206ENST00000611976 MAGEC2Q9UBF1 373 aaPredicted RBP12.78□□□□□ -0.36
CDC42EP3-206ENST00000611976 ACEP12821 1306 aa12.78□□□□□ -0.36
CDC42EP3-206ENST00000611976 TTC21AQ8NDW8 1320 aa12.78□□□□□ -0.36
CDC42EP3-206ENST00000611976 G3V3G9 751 aa12.78□□□□□ -0.36
CDC42EP3-206ENST00000611976 DCAF8Q5TAQ9 597 aa12.78□□□□□ -0.36
CDC42EP3-206ENST00000611976 SYTL4Q96C24 671 aaPredicted RBP12.78□□□□□ -0.36
CDC42EP3-206ENST00000611976 NPATQ14207 1427 aa12.78□□□□□ -0.36
CDC42EP3-206ENST00000611976 EIF3JO75822 258 aaKnown RBP12.78□□□□□ -0.36
CDC42EP3-206ENST00000611976 CCDC8Q9H0W5 538 aaPredicted RBP12.78□□□□□ -0.36
CDC42EP3-206ENST00000611976 ZNF521Q96K83 1311 aa12.78□□□□□ -0.36
CDC42EP3-206ENST00000611976 FBLN1P23142 703 aa12.78□□□□□ -0.36
CDC42EP3-206ENST00000611976 RRP12Q5JTH9 1297 aaKnown RBP12.78□□□□□ -0.36
CDC42EP3-206ENST00000611976 TRIM35Q9UPQ4 493 aa12.78□□□□□ -0.36
CDC42EP3-206ENST00000611976 ZSCAN12O43309 604 aa12.77□□□□□ -0.36
CDC42EP3-206ENST00000611976 CDR1P51861 262 aa12.77□□□□□ -0.36
CDC42EP3-206ENST00000611976 CBX1P83916 185 aa12.77□□□□□ -0.36
CDC42EP3-206ENST00000611976 NOLC1Q14978 699 aaKnown RBP eCLIP12.77□□□□□ -0.36
CDC42EP3-206ENST00000611976 SBNO2Q9Y2G9 1366 aa12.77□□□□□ -0.36
CDC42EP3-206ENST00000611976 F13A1P00488 732 aa12.77□□□□□ -0.36
CDC42EP3-206ENST00000611976 TTLL5Q6EMB2 1281 aa12.77□□□□□ -0.36
CDC42EP3-206ENST00000611976 CNPY2Q9Y2B0 182 aa12.77□□□□□ -0.36
CDC42EP3-206ENST00000611976 PRDM15P57071 1507 aaPredicted RBP12.77□□□□□ -0.37
CDC42EP3-206ENST00000611976 DDX54Q8TDD1 881 aaKnown RBP12.77□□□□□ -0.37
CDC42EP3-206ENST00000611976 SLC3A2P08195 630 aaKnown RBP12.77□□□□□ -0.37
CDC42EP3-206ENST00000611976 ZNF165P49910 485 aa12.77□□□□□ -0.37
CDC42EP3-206ENST00000611976 NAP1L1P55209 391 aaKnown RBP12.77□□□□□ -0.37
CDC42EP3-206ENST00000611976 CFAP100Q494V2 611 aa12.77□□□□□ -0.37
CDC42EP3-206ENST00000611976 ZSCAN16Q9H4T2 348 aaPredicted RBP12.77□□□□□ -0.37
CDC42EP3-206ENST00000611976 PAXBP1Q9Y5B6 917 aa12.77□□□□□ -0.37
CDC42EP3-206ENST00000611976 C16orf45Q96MC5 204 aaPredicted RBP12.76□□□□□ -0.37
CDC42EP3-206ENST00000611976 LARP6Q9BRS8 491 aaKnown RBP12.76□□□□□ -0.37
CDC42EP3-206ENST00000611976 NOL7Q9UMY1 257 aaKnown RBP12.76□□□□□ -0.37
CDC42EP3-206ENST00000611976 BRPF1P55201 1214 aaPredicted RBP12.76□□□□□ -0.37
CDC42EP3-206ENST00000611976 EIF4A2Q14240 407 aaKnown RBP12.76□□□□□ -0.37
CDC42EP3-206ENST00000611976 ZGPATQ8N5A5 531 aaKnown RBP12.76□□□□□ -0.37
CDC42EP3-206ENST00000611976 FAM200AQ8TCP9 573 aa12.76□□□□□ -0.37
CDC42EP3-206ENST00000611976 PHACTR3Q96KR7 559 aa12.76□□□□□ -0.37
CDC42EP3-206ENST00000611976 AKAP2Q9Y2D5 859 aa12.76□□□□□ -0.37
CDC42EP3-206ENST00000611976 GIMAP6Q6P9H5 292 aa12.76□□□□□ -0.37
CDC42EP3-206ENST00000611976 TMCO3Q6UWJ1 677 aa12.76□□□□□ -0.37
CDC42EP3-206ENST00000611976 C8orf76Q96K31 380 aa12.76□□□□□ -0.37
CDC42EP3-206ENST00000611976 ZNHIT6Q9NWK9 470 aaKnown RBP12.76□□□□□ -0.37
CDC42EP3-206ENST00000611976 ZNF445P59923 1031 aa12.76□□□□□ -0.37
CDC42EP3-206ENST00000611976 PROSER2Q86WR7 435 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms