RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 BCAR3O75815 825 aa20.49■□□□□ 0.87
CLTCL1-207ENST00000611723 PPP1R1BQ9UD71 204 aaPredicted RBP20.49■□□□□ 0.87
CLTCL1-207ENST00000611723 EIF2S2P20042 333 aaKnown RBP20.48■□□□□ 0.87
CLTCL1-207ENST00000611723 SPON1Q9HCB6 807 aa20.48■□□□□ 0.87
CLTCL1-207ENST00000611723 SUPT16HQ9Y5B9 1047 aaKnown RBP20.48■□□□□ 0.87
CLTCL1-207ENST00000611723 DNAJC10Q8IXB1 793 aa20.47■□□□□ 0.87
CLTCL1-207ENST00000611723 SMC4Q9NTJ3 1288 aa20.47■□□□□ 0.87
CLTCL1-207ENST00000611723 ERBB4Q15303 1308 aa20.47■□□□□ 0.87
CLTCL1-207ENST00000611723 CACNA1FO60840 1977 aa20.46■□□□□ 0.87
CLTCL1-207ENST00000611723 ZNF831Q5JPB2 1677 aa20.46■□□□□ 0.87
CLTCL1-207ENST00000611723 PLSCR1O15162 318 aa20.46■□□□□ 0.87
CLTCL1-207ENST00000611723 STARD3NLO95772 234 aa20.46■□□□□ 0.87
CLTCL1-207ENST00000611723 ATP6V1AP38606 617 aa20.46■□□□□ 0.87
CLTCL1-207ENST00000611723 STK31Q9BXU1 1019 aa20.46■□□□□ 0.87
CLTCL1-207ENST00000611723 SLC4A2P04920 1241 aa20.45■□□□□ 0.86
CLTCL1-207ENST00000611723 PDIA6Q15084 440 aa20.45■□□□□ 0.86
CLTCL1-207ENST00000611723 BCL2L13Q9BXK5 485 aa20.45■□□□□ 0.86
CLTCL1-207ENST00000611723 ANO8Q9HCE9 1232 aaPredicted RBP20.45■□□□□ 0.86
CLTCL1-207ENST00000611723 DDX21Q9NR30 783 aaKnown RBP eCLIP20.45■□□□□ 0.86
CLTCL1-207ENST00000611723 DBF4Q9UBU7 674 aaPredicted RBP20.45■□□□□ 0.86
CLTCL1-207ENST00000611723 C5P01031 1676 aa20.45■□□□□ 0.86
CLTCL1-207ENST00000611723 TCERG1O14776 1098 aaKnown RBP20.44■□□□□ 0.86
CLTCL1-207ENST00000611723 CYP19A1P11511 503 aaPredicted RBP20.44■□□□□ 0.86
CLTCL1-207ENST00000611723 NECTIN2Q92692 538 aa20.44■□□□□ 0.86
CLTCL1-207ENST00000611723 PDGFDQ9GZP0 370 aaPredicted RBP20.44■□□□□ 0.86
CLTCL1-207ENST00000611723 CICQ96RK0 1608 aaPredicted RBP20.44■□□□□ 0.86
CLTCL1-207ENST00000611723 ITPK1Q13572 414 aa20.43■□□□□ 0.86
CLTCL1-207ENST00000611723 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.43■□□□□ 0.86
CLTCL1-207ENST00000611723 ARHGAP45Q92619 1136 aa20.43■□□□□ 0.86
CLTCL1-207ENST00000611723 CHPF2Q9P2E5 772 aa20.43■□□□□ 0.86
CLTCL1-207ENST00000611723 LY75O60449 1722 aa20.42■□□□□ 0.86
CLTCL1-207ENST00000611723 LAMB4A4D0S4 1761 aa20.42■□□□□ 0.86
CLTCL1-207ENST00000611723 CASZ1Q86V15 1759 aa20.42■□□□□ 0.86
CLTCL1-207ENST00000611723 IPO8O15397 1037 aaKnown RBP20.42■□□□□ 0.86
CLTCL1-207ENST00000611723 HMGB2P26583 209 aaKnown RBP20.42■□□□□ 0.86
CLTCL1-207ENST00000611723 RRP1P56182 461 aaKnown RBP20.42■□□□□ 0.86
CLTCL1-207ENST00000611723 SLC27A3Q5K4L6 730 aa20.42■□□□□ 0.86
CLTCL1-207ENST00000611723 HYPKQ9NX55 129 aa20.42■□□□□ 0.86
CLTCL1-207ENST00000611723 NOB1Q9ULX3 412 aaKnown RBP20.42■□□□□ 0.86
CLTCL1-207ENST00000611723 KIF16BQ96L93 1317 aa20.42■□□□□ 0.86
CLTCL1-207ENST00000611723 LRP10Q7Z4F1 713 aa20.41■□□□□ 0.86
CLTCL1-207ENST00000611723 CCNL1Q9UK58 526 aaPredicted RBP20.41■□□□□ 0.86
CLTCL1-207ENST00000611723 TJP1Q07157 1748 aa20.41■□□□□ 0.86
CLTCL1-207ENST00000611723 NBPF26B4DH59 902 aa20.4■□□□□ 0.86
CLTCL1-207ENST00000611723 A1BGP04217 495 aa20.4■□□□□ 0.86
CLTCL1-207ENST00000611723 NBPF10Q6P3W6 841 aaKnown RBP20.4■□□□□ 0.86
CLTCL1-207ENST00000611723 NBPF15Q8N660 670 aa20.4■□□□□ 0.86
CLTCL1-207ENST00000611723 PTPRCP08575 1304 aa20.39■□□□□ 0.85
CLTCL1-207ENST00000611723 PROSER3Q2NL68 480 aa20.39■□□□□ 0.85
CLTCL1-207ENST00000611723 RC3H1Q5TC82 1133 aaKnown RBP20.39■□□□□ 0.85
CLTCL1-207ENST00000611723 ZKSCAN2Q63HK3 967 aa20.39■□□□□ 0.85
CLTCL1-207ENST00000611723 G2E3Q7L622 706 aa20.39■□□□□ 0.85
CLTCL1-207ENST00000611723 PROM2Q8N271 834 aa20.39■□□□□ 0.85
CLTCL1-207ENST00000611723 FLIIQ13045 1269 aa20.38■□□□□ 0.85
CLTCL1-207ENST00000611723 INTS5Q6P9B9 1019 aaKnown RBP20.38■□□□□ 0.85
CLTCL1-207ENST00000611723 LINC00116Q8NCU8 138 aa20.38■□□□□ 0.85
CLTCL1-207ENST00000611723 CNTNAP4Q9C0A0 1308 aa20.37■□□□□ 0.85
CLTCL1-207ENST00000611723 ANXA1P04083 346 aa20.37■□□□□ 0.85
CLTCL1-207ENST00000611723 ATF7IPQ6VMQ6 1270 aa20.37■□□□□ 0.85
CLTCL1-207ENST00000611723 FRAT1Q92837 279 aaPredicted RBP20.37■□□□□ 0.85
CLTCL1-207ENST00000611723 PHAXQ9H814 394 aaKnown RBP20.37■□□□□ 0.85
CLTCL1-207ENST00000611723 CCDC87Q9NVE4 849 aa20.37■□□□□ 0.85
CLTCL1-207ENST00000611723 RGPD3A6NKT7 1758 aaPredicted RBP20.36■□□□□ 0.85
CLTCL1-207ENST00000611723 RGPD4Q7Z3J3 1758 aa20.36■□□□□ 0.85
CLTCL1-207ENST00000611723 PLIN1O60240 522 aa20.36■□□□□ 0.85
CLTCL1-207ENST00000611723 ZBTB7AO95365 584 aa20.36■□□□□ 0.85
CLTCL1-207ENST00000611723 CRKLP46109 303 aaKnown RBP20.36■□□□□ 0.85
CLTCL1-207ENST00000611723 PDE3AQ14432 1141 aa20.36■□□□□ 0.85
CLTCL1-207ENST00000611723 TXNRD1Q16881 649 aa20.36■□□□□ 0.85
CLTCL1-207ENST00000611723 API5Q9BZZ5 524 aaKnown RBP20.36■□□□□ 0.85
CLTCL1-207ENST00000611723 LRRC4BQ9NT99 713 aa20.36■□□□□ 0.85
CLTCL1-207ENST00000611723 DCAF8L1A6NGE4 600 aa20.35■□□□□ 0.85
CLTCL1-207ENST00000611723 MS4A1P11836 297 aa20.35■□□□□ 0.85
CLTCL1-207ENST00000611723 MYL6BP14649 208 aa20.35■□□□□ 0.85
CLTCL1-207ENST00000611723 IL6STP40189 918 aaPredicted RBP20.35■□□□□ 0.85
CLTCL1-207ENST00000611723 KCNQ4P56696 695 aa20.35■□□□□ 0.85
CLTCL1-207ENST00000611723 ZBTB1Q9Y2K1 713 aa20.35■□□□□ 0.85
CLTCL1-207ENST00000611723 COL5A3P25940 1745 aaPredicted RBP20.34■□□□□ 0.85
CLTCL1-207ENST00000611723 TRIM27P14373 513 aa20.34■□□□□ 0.85
CLTCL1-207ENST00000611723 MYH14Q7Z406 1995 aaKnown RBP20.34■□□□□ 0.85
CLTCL1-207ENST00000611723 CANXP27824 592 aaKnown RBP20.33■□□□□ 0.85
CLTCL1-207ENST00000611723 PIP4K2AP48426 406 aaPredicted RBP20.33■□□□□ 0.85
CLTCL1-207ENST00000611723 EIF5P55010 431 aaKnown RBP20.33■□□□□ 0.85
CLTCL1-207ENST00000611723 COPS6Q7L5N1 327 aa20.33■□□□□ 0.85
CLTCL1-207ENST00000611723 XAGE3Q8WTP9 111 aa20.33■□□□□ 0.85
CLTCL1-207ENST00000611723 PTGER2P43116 358 aa20.32■□□□□ 0.84
CLTCL1-207ENST00000611723 DZIP1LQ8IYY4 767 aaKnown RBP20.32■□□□□ 0.84
CLTCL1-207ENST00000611723 ATF5Q9Y2D1 282 aaPredicted RBP20.32■□□□□ 0.84
CLTCL1-207ENST00000611723 TAF1LQ8IZX4 1826 aa20.32■□□□□ 0.84
CLTCL1-207ENST00000611723 RPS6KA4O75676 772 aa20.31■□□□□ 0.84
CLTCL1-207ENST00000611723 DDX58O95786 925 aaKnown RBP20.31■□□□□ 0.84
CLTCL1-207ENST00000611723 FKBP5Q13451 457 aaPredicted RBP20.31■□□□□ 0.84
CLTCL1-207ENST00000611723 KSR2Q6VAB6 950 aa20.31■□□□□ 0.84
CLTCL1-207ENST00000611723 ZNF784Q8NCA9 323 aaPredicted RBP20.31■□□□□ 0.84
CLTCL1-207ENST00000611723 TNNQ9UQP3 1299 aa20.3■□□□□ 0.84
CLTCL1-207ENST00000611723 ABCC4O15439 1325 aa20.29■□□□□ 0.84
CLTCL1-207ENST00000611723 PI4KAP2A4QPH2 592 aa20.29■□□□□ 0.84
CLTCL1-207ENST00000611723 AIMP1Q12904 312 aaKnown RBP20.29■□□□□ 0.84
CLTCL1-207ENST00000611723 C20orf194Q5TEA3 1177 aa20.29■□□□□ 0.84
CLTCL1-207ENST00000611723 ANKRD13DQ6ZTN6 518 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms