RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 IL17REQ8NFR9 667 aa9.58□□□□□ -0.88
CBWD1-219ENST00000611457 MAST2Q6P0Q8 1798 aa9.58□□□□□ -0.88
CBWD1-219ENST00000611457 ZNF530Q6P9A1 599 aaPredicted RBP9.57□□□□□ -0.88
CBWD1-219ENST00000611457 CCER2I3L3R5 266 aa9.57□□□□□ -0.88
CBWD1-219ENST00000611457 C1orf141Q5JVX7 400 aa9.57□□□□□ -0.88
CBWD1-219ENST00000611457 SULT6B1Q6IMI4 303 aa9.57□□□□□ -0.88
CBWD1-219ENST00000611457 NARFQ9UHQ1 456 aa9.57□□□□□ -0.88
CBWD1-219ENST00000611457 CCNL1Q9UK58 526 aaPredicted RBP9.57□□□□□ -0.88
CBWD1-219ENST00000611457 PTF1AQ7RTS3 328 aa9.57□□□□□ -0.88
CBWD1-219ENST00000611457 CHL1O00533 1208 aa9.56□□□□□ -0.88
CBWD1-219ENST00000611457 RUNDC1Q96C34 613 aa9.56□□□□□ -0.88
CBWD1-219ENST00000611457 ANP32EQ9BTT0 268 aa9.56□□□□□ -0.88
CBWD1-219ENST00000611457 YTHDC1Q96MU7 727 aaKnown RBP9.56□□□□□ -0.88
CBWD1-219ENST00000611457 TRPM7Q96QT4 1865 aa9.56□□□□□ -0.88
CBWD1-219ENST00000611457 CALD1Q05682 793 aaKnown RBP9.56□□□□□ -0.88
CBWD1-219ENST00000611457 AEBP1Q8IUX7 1158 aa9.56□□□□□ -0.88
CBWD1-219ENST00000611457 AK7Q96M32 723 aa9.55□□□□□ -0.88
CBWD1-219ENST00000611457 CARMIL3Q8ND23 1372 aa9.55□□□□□ -0.88
CBWD1-219ENST00000611457 COL23A1Q86Y22 540 aaPredicted RBP9.55□□□□□ -0.88
CBWD1-219ENST00000611457 NLGN1Q8N2Q7 840 aa9.55□□□□□ -0.88
CBWD1-219ENST00000611457 CCDC87Q9NVE4 849 aa9.55□□□□□ -0.88
CBWD1-219ENST00000611457 IFT57Q9NWB7 429 aa9.55□□□□□ -0.88
CBWD1-219ENST00000611457 TRIM28Q13263 835 aaKnown RBP9.54□□□□□ -0.88
CBWD1-219ENST00000611457 ZNF790Q6PG37 636 aa9.54□□□□□ -0.88
CBWD1-219ENST00000611457 SLC10A5Q5PT55 438 aa9.54□□□□□ -0.88
CBWD1-219ENST00000611457 TRMT2AQ8IZ69 625 aaKnown RBP9.54□□□□□ -0.88
CBWD1-219ENST00000611457 SLX4Q8IY92 1834 aa9.53□□□□□ -0.88
CBWD1-219ENST00000611457 TAF7Q15545 349 aaPredicted RBP9.53□□□□□ -0.88
CBWD1-219ENST00000611457 WDR63Q8IWG1 891 aa9.53□□□□□ -0.88
CBWD1-219ENST00000611457 ZNF428Q96B54 188 aa9.53□□□□□ -0.88
CBWD1-219ENST00000611457 FMNL2Q96PY5 1086 aa9.53□□□□□ -0.88
CBWD1-219ENST00000611457 FOCADQ5VW36 1801 aa9.53□□□□□ -0.88
CBWD1-219ENST00000611457 CT47B1P0C2W7 299 aaPredicted RBP9.53□□□□□ -0.88
CBWD1-219ENST00000611457 TRIM35Q9UPQ4 493 aa9.53□□□□□ -0.88
CBWD1-219ENST00000611457 GYS1P13807 737 aa9.52□□□□□ -0.89
CBWD1-219ENST00000611457 CABP4P57796 275 aa9.52□□□□□ -0.89
CBWD1-219ENST00000611457 EIF4A1P60842 406 aaKnown RBP9.52□□□□□ -0.89
CBWD1-219ENST00000611457 SPEF2Q9C093 1822 aa9.52□□□□□ -0.89
CBWD1-219ENST00000611457 MMP14P50281 582 aa9.52□□□□□ -0.89
CBWD1-219ENST00000611457 STYK1Q6J9G0 422 aa9.52□□□□□ -0.89
CBWD1-219ENST00000611457 BCL2L12Q9HB09 334 aa9.52□□□□□ -0.89
CBWD1-219ENST00000611457 POLRMTO00411 1230 aaKnown RBP9.51□□□□□ -0.89
CBWD1-219ENST00000611457 CAMTA2O94983 1202 aa9.51□□□□□ -0.89
CBWD1-219ENST00000611457 CRY2Q49AN0 593 aa9.51□□□□□ -0.89
CBWD1-219ENST00000611457 SNRPA1P09661 255 aaKnown RBP9.51□□□□□ -0.89
CBWD1-219ENST00000611457 TMPOP42166 694 aaKnown RBP9.5□□□□□ -0.89
CBWD1-219ENST00000611457 CRKLP46109 303 aaKnown RBP9.5□□□□□ -0.89
CBWD1-219ENST00000611457 USHBP1Q8N6Y0 703 aa9.5□□□□□ -0.89
CBWD1-219ENST00000611457 ASAP1Q9ULH1 1129 aa9.5□□□□□ -0.89
CBWD1-219ENST00000611457 FBLN1P23142 703 aa9.5□□□□□ -0.89
CBWD1-219ENST00000611457 HOXA10P31260 410 aaPredicted RBP9.5□□□□□ -0.89
CBWD1-219ENST00000611457 PRKAR2BP31323 418 aa9.5□□□□□ -0.89
CBWD1-219ENST00000611457 PHACTR3Q96KR7 559 aa9.5□□□□□ -0.89
CBWD1-219ENST00000611457 CFAP44Q96MT7 982 aa9.5□□□□□ -0.89
CBWD1-219ENST00000611457 ARXQ96QS3 562 aa9.49□□□□□ -0.89
CBWD1-219ENST00000611457 DOCK2Q92608 1830 aa9.49□□□□□ -0.89
CBWD1-219ENST00000611457 PDIA6Q15084 440 aa9.49□□□□□ -0.89
CBWD1-219ENST00000611457 TMC4Q7Z404 712 aa9.49□□□□□ -0.89
CBWD1-219ENST00000611457 GIGYF1O75420 1035 aaPredicted RBP9.49□□□□□ -0.89
CBWD1-219ENST00000611457 KCNA3P22001 575 aa9.49□□□□□ -0.89
CBWD1-219ENST00000611457 R3HDM1Q15032 1099 aaKnown RBP9.49□□□□□ -0.89
CBWD1-219ENST00000611457 CDHR2Q9BYE9 1310 aa9.48□□□□□ -0.89
CBWD1-219ENST00000611457 NECTIN2Q92692 538 aa9.48□□□□□ -0.89
CBWD1-219ENST00000611457 EP400Q96L91 3159 aa9.48□□□□□ -0.89
CBWD1-219ENST00000611457 GRIN3BO60391 1043 aa9.48□□□□□ -0.89
CBWD1-219ENST00000611457 STARD3NLO95772 234 aa9.48□□□□□ -0.89
CBWD1-219ENST00000611457 POLD1P28340 1107 aa9.48□□□□□ -0.89
CBWD1-219ENST00000611457 ZNF34Q8IZ26 560 aa9.48□□□□□ -0.89
CBWD1-219ENST00000611457 RTCBQ9Y3I0 505 aaKnown RBP9.48□□□□□ -0.89
CBWD1-219ENST00000611457 COL1A1P02452 1464 aaPredicted RBP9.48□□□□□ -0.89
CBWD1-219ENST00000611457 LGR6Q9HBX8 967 aa9.48□□□□□ -0.89
CBWD1-219ENST00000611457 MYH13Q9UKX3 1938 aa9.47□□□□□ -0.89
CBWD1-219ENST00000611457 RBBP6Q7Z6E9 1792 aaKnown RBP9.47□□□□□ -0.89
CBWD1-219ENST00000611457 UTYO14607 1347 aa9.47□□□□□ -0.89
CBWD1-219ENST00000611457 IGSF3O75054 1194 aa9.47□□□□□ -0.89
CBWD1-219ENST00000611457 SOGA3Q5TF21 947 aa9.47□□□□□ -0.89
CBWD1-219ENST00000611457 PLA2G12BQ9BX93 195 aa9.47□□□□□ -0.89
CBWD1-219ENST00000611457 RTFDC1Q9BY42 306 aaPredicted RBP9.47□□□□□ -0.89
CBWD1-219ENST00000611457 TRAPPC3LQ5T215 181 aa9.46□□□□□ -0.89
CBWD1-219ENST00000611457 ARHGEF1Q92888 912 aaKnown RBP9.46□□□□□ -0.89
CBWD1-219ENST00000611457 ATP6V1AP38606 617 aa9.46□□□□□ -0.9
CBWD1-219ENST00000611457 DDX54Q8TDD1 881 aaKnown RBP9.46□□□□□ -0.9
CBWD1-219ENST00000611457 MAP3K15Q6ZN16 1313 aa9.46□□□□□ -0.9
CBWD1-219ENST00000611457 PARP10Q53GL7 1025 aa9.46□□□□□ -0.9
CBWD1-219ENST00000611457 CC2D2BQ6DHV5 1058 aa9.46□□□□□ -0.9
CBWD1-219ENST00000611457 AMIGO3Q86WK7 504 aa9.46□□□□□ -0.9
CBWD1-219ENST00000611457 NFATC2IPQ8NCF5 419 aa9.46□□□□□ -0.9
CBWD1-219ENST00000611457 C7orf43Q8WVR3 580 aa9.45□□□□□ -0.9
CBWD1-219ENST00000611457 BRIP1Q9BX63 1249 aa9.45□□□□□ -0.9
CBWD1-219ENST00000611457 SYT17Q9BSW7 474 aa9.44□□□□□ -0.9
CBWD1-219ENST00000611457 CC2D1BQ5T0F9 858 aaKnown RBP9.44□□□□□ -0.9
CBWD1-219ENST00000611457 ACSBG1Q96GR2 724 aa9.44□□□□□ -0.9
CBWD1-219ENST00000611457 DDX60LQ5H9U9 1706 aaKnown RBP9.44□□□□□ -0.9
CBWD1-219ENST00000611457 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.44□□□□□ -0.9
CBWD1-219ENST00000611457 HSP90AB3PQ58FF7 597 aa9.44□□□□□ -0.9
CBWD1-219ENST00000611457 ISCA1Q9BUE6 129 aa9.44□□□□□ -0.9
CBWD1-219ENST00000611457 GNAI1P63096 354 aa9.43□□□□□ -0.9
CBWD1-219ENST00000611457 DDR1Q08345 913 aa9.43□□□□□ -0.9
CBWD1-219ENST00000611457 ZNF496Q96IT1 587 aaPredicted RBP9.43□□□□□ -0.9
CBWD1-219ENST00000611457 USP35Q9P2H5 1018 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms