RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 TRIM37O94972 964 aa28.29■■■□□ 2.12
UBE3C-209ENST00000611269 LAMB4A4D0S4 1761 aa28.28■■■□□ 2.12
UBE3C-209ENST00000611269 SMARCC1Q92922 1105 aaPredicted RBP28.28■■■□□ 2.12
UBE3C-209ENST00000611269 CCDC30Q5VVM6 783 aa28.27■■■□□ 2.12
UBE3C-209ENST00000611269 MS4A1P11836 297 aa28.27■■■□□ 2.12
UBE3C-209ENST00000611269 ZKSCAN2Q63HK3 967 aa28.27■■■□□ 2.12
UBE3C-209ENST00000611269 SLC4A9Q96Q91 983 aa28.27■■■□□ 2.12
UBE3C-209ENST00000611269 COG6Q9Y2V7 657 aa28.27■■■□□ 2.12
UBE3C-209ENST00000611269 USP16Q9Y5T5 823 aa28.27■■■□□ 2.12
UBE3C-209ENST00000611269 VSIG10Q8N0Z9 540 aa28.26■■■□□ 2.11
UBE3C-209ENST00000611269 MRPL50Q8N5N7 158 aaKnown RBP28.25■■■□□ 2.11
UBE3C-209ENST00000611269 LOC102724428A0A0B4J2F2 783 aa28.23■■■□□ 2.11
UBE3C-209ENST00000611269 SIK1P57059 783 aa28.23■■■□□ 2.11
UBE3C-209ENST00000611269 CLUAP1Q96AJ1 413 aa28.23■■■□□ 2.11
UBE3C-209ENST00000611269 STK31Q9BXU1 1019 aa28.23■■■□□ 2.11
UBE3C-209ENST00000611269 CHMP4AQ9BY43 222 aa28.23■■■□□ 2.11
UBE3C-209ENST00000611269 TJP1Q07157 1748 aa28.23■■■□□ 2.11
UBE3C-209ENST00000611269 SLC4A2P04920 1241 aa28.22■■■□□ 2.11
UBE3C-209ENST00000611269 RLBP1P12271 317 aa28.22■■■□□ 2.11
UBE3C-209ENST00000611269 DNAJC10Q8IXB1 793 aa28.22■■■□□ 2.11
UBE3C-209ENST00000611269 CHPF2Q9P2E5 772 aa28.22■■■□□ 2.11
UBE3C-209ENST00000611269 CACNA1FO60840 1977 aa28.22■■■□□ 2.11
UBE3C-209ENST00000611269 BRPF1P55201 1214 aaPredicted RBP28.21■■■□□ 2.11
UBE3C-209ENST00000611269 LY75O60449 1722 aa28.2■■■□□ 2.11
UBE3C-209ENST00000611269 ATP6V1AP38606 617 aa28.2■■■□□ 2.1
UBE3C-209ENST00000611269 TEX13AQ9BXU3 409 aaPredicted RBP28.19■■■□□ 2.1
UBE3C-209ENST00000611269 NOB1Q9ULX3 412 aaKnown RBP28.19■■■□□ 2.1
UBE3C-209ENST00000611269 TNNQ9UQP3 1299 aa28.19■■■□□ 2.1
UBE3C-209ENST00000611269 KIF16BQ96L93 1317 aa28.19■■■□□ 2.1
UBE3C-209ENST00000611269 DZIP1LQ8IYY4 767 aaKnown RBP28.19■■■□□ 2.1
UBE3C-209ENST00000611269 DBF4Q9UBU7 674 aaPredicted RBP28.19■■■□□ 2.1
UBE3C-209ENST00000611269 ZNF831Q5JPB2 1677 aa28.18■■■□□ 2.1
UBE3C-209ENST00000611269 CICQ96RK0 1608 aaPredicted RBP28.18■■■□□ 2.1
UBE3C-209ENST00000611269 ANXA1P04083 346 aa28.18■■■□□ 2.1
UBE3C-209ENST00000611269 PROSER3Q2NL68 480 aa28.17■■■□□ 2.1
UBE3C-209ENST00000611269 IPO8O15397 1037 aaKnown RBP28.17■■■□□ 2.1
UBE3C-209ENST00000611269 ITPK1Q13572 414 aa28.17■■■□□ 2.1
UBE3C-209ENST00000611269 MVPQ14764 893 aaKnown RBP28.17■■■□□ 2.1
UBE3C-209ENST00000611269 PDIA6Q15084 440 aa28.17■■■□□ 2.1
UBE3C-209ENST00000611269 STARD3NLO95772 234 aa28.16■■■□□ 2.1
UBE3C-209ENST00000611269 PIP4K2AP48426 406 aaPredicted RBP28.16■■■□□ 2.1
UBE3C-209ENST00000611269 ATF7IPQ6VMQ6 1270 aa28.16■■■□□ 2.1
UBE3C-209ENST00000611269 G2E3Q7L622 706 aa28.16■■■□□ 2.1
UBE3C-209ENST00000611269 TNS1Q9HBL0 1735 aaKnown RBP28.16■■■□□ 2.1
UBE3C-209ENST00000611269 KCNQ4P56696 695 aa28.15■■■□□ 2.1
UBE3C-209ENST00000611269 A1BGP04217 495 aa28.15■■■□□ 2.1
UBE3C-209ENST00000611269 CYP19A1P11511 503 aaPredicted RBP28.15■■■□□ 2.1
UBE3C-209ENST00000611269 TRIM27P14373 513 aa28.15■■■□□ 2.1
UBE3C-209ENST00000611269 DDX21Q9NR30 783 aaKnown RBP eCLIP28.15■■■□□ 2.1
UBE3C-209ENST00000611269 FTSJ3Q8IY81 847 aaKnown RBP28.14■■■□□ 2.1
UBE3C-209ENST00000611269 MYL6BP14649 208 aa28.13■■■□□ 2.09
UBE3C-209ENST00000611269 PHAXQ9H814 394 aaKnown RBP28.13■■■□□ 2.09
UBE3C-209ENST00000611269 COL5A3P25940 1745 aaPredicted RBP28.13■■■□□ 2.09
UBE3C-209ENST00000611269 NBPF26B4DH59 902 aa28.12■■■□□ 2.09
UBE3C-209ENST00000611269 IGHDP01880 384 aa28.12■■■□□ 2.09
UBE3C-209ENST00000611269 NBPF14Q5TI25 921 aa28.12■■■□□ 2.09
UBE3C-209ENST00000611269 NBPF10Q6P3W6 841 aaKnown RBP28.12■■■□□ 2.09
UBE3C-209ENST00000611269 NBPF15Q8N660 670 aa28.12■■■□□ 2.09
UBE3C-209ENST00000611269 CCNL1Q9UK58 526 aaPredicted RBP28.12■■■□□ 2.09
UBE3C-209ENST00000611269 ERBB4Q15303 1308 aa28.12■■■□□ 2.09
UBE3C-209ENST00000611269 APBA3O96018 575 aa28.12■■■□□ 2.09
UBE3C-209ENST00000611269 FLIIQ13045 1269 aa28.11■■■□□ 2.09
UBE3C-209ENST00000611269 HYPKQ9NX55 129 aa28.11■■■□□ 2.09
UBE3C-209ENST00000611269 PTPRCP08575 1304 aa28.09■■■□□ 2.09
UBE3C-209ENST00000611269 LRP10Q7Z4F1 713 aa28.09■■■□□ 2.09
UBE3C-209ENST00000611269 TAF1LQ8IZX4 1826 aa28.09■■■□□ 2.09
UBE3C-209ENST00000611269 LINC00116Q8NCU8 138 aa28.09■■■□□ 2.09
UBE3C-209ENST00000611269 ARHGAP45Q92619 1136 aa28.09■■■□□ 2.09
UBE3C-209ENST00000611269 MYH14Q7Z406 1995 aaKnown RBP28.08■■■□□ 2.09
UBE3C-209ENST00000611269 CRKLP46109 303 aaKnown RBP28.07■■■□□ 2.08
UBE3C-209ENST00000611269 FKBP5Q13451 457 aaPredicted RBP28.07■■■□□ 2.08
UBE3C-209ENST00000611269 DDX19BQ9UMR2 479 aa28.07■■■□□ 2.08
UBE3C-209ENST00000611269 ZBTB1Q9Y2K1 713 aa28.07■■■□□ 2.08
UBE3C-209ENST00000611269 PLSCR1O15162 318 aa28.06■■■□□ 2.08
UBE3C-209ENST00000611269 PDE4AP27815 886 aa28.06■■■□□ 2.08
UBE3C-209ENST00000611269 LRRC4BQ9NT99 713 aa28.06■■■□□ 2.08
UBE3C-209ENST00000611269 PCDHB15Q9Y5E8 787 aa28.06■■■□□ 2.08
UBE3C-209ENST00000611269 INTS5Q6P9B9 1019 aaKnown RBP28.06■■■□□ 2.08
UBE3C-209ENST00000611269 RREB1Q92766 1687 aa28.05■■■□□ 2.08
UBE3C-209ENST00000611269 AIMP1Q12904 312 aaKnown RBP28.05■■■□□ 2.08
UBE3C-209ENST00000611269 API5Q9BZZ5 524 aaKnown RBP28.05■■■□□ 2.08
UBE3C-209ENST00000611269 CCDC87Q9NVE4 849 aa28.05■■■□□ 2.08
UBE3C-209ENST00000611269 XAGE3Q8WTP9 111 aa28.04■■■□□ 2.08
UBE3C-209ENST00000611269 BACH2Q9BYV9 841 aa28.04■■■□□ 2.08
UBE3C-209ENST00000611269 SLC27A3Q5K4L6 730 aa28.04■■■□□ 2.08
UBE3C-209ENST00000611269 COPS6Q7L5N1 327 aa28.04■■■□□ 2.08
UBE3C-209ENST00000611269 SKAP1Q86WV1 359 aa28.04■■■□□ 2.08
UBE3C-209ENST00000611269 PROM2Q8N271 834 aa28.04■■■□□ 2.08
UBE3C-209ENST00000611269 TXNRD1Q16881 649 aa28.03■■■□□ 2.08
UBE3C-209ENST00000611269 ZNF330Q9Y3S2 320 aaPredicted RBP28.03■■■□□ 2.08
UBE3C-209ENST00000611269 RGPD3A6NKT7 1758 aaPredicted RBP28.02■■■□□ 2.08
UBE3C-209ENST00000611269 RGPD4Q7Z3J3 1758 aa28.02■■■□□ 2.08
UBE3C-209ENST00000611269 F6X3S4 739 aa28.02■■■□□ 2.08
UBE3C-209ENST00000611269 RWDD1Q9H446 243 aaPredicted RBP28.02■■■□□ 2.08
UBE3C-209ENST00000611269 CNTNAP4Q9C0A0 1308 aa28.01■■■□□ 2.07
UBE3C-209ENST00000611269 TMEM57Q8N5G2 664 aa28.01■■■□□ 2.07
UBE3C-209ENST00000611269 ABCC4O15439 1325 aa28.01■■■□□ 2.07
UBE3C-209ENST00000611269 C4BP0C0L5 1744 aa28.01■■■□□ 2.07
UBE3C-209ENST00000611269 ITPRIPQ8IWB1 547 aa28■■■□□ 2.07
UBE3C-209ENST00000611269 IL6STP40189 918 aaPredicted RBP28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms