RNA–Protein interactions for RNA: ENST00000611150.3

CDK11B-205, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,350 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-205ENST00000611150 POGZQ7Z3K3 1410 aa20.28■□□□□ 0.84
CDK11B-205ENST00000611150 ARHGEF40Q8TER5 1519 aa20.28■□□□□ 0.84
CDK11B-205ENST00000611150 SGSM2O43147 1006 aa20.28■□□□□ 0.84
CDK11B-205ENST00000611150 TATDN2Q93075 761 aa20.28■□□□□ 0.84
CDK11B-205ENST00000611150 PREX2Q70Z35 1606 aa20.27■□□□□ 0.84
CDK11B-205ENST00000611150 ZDHHC9Q9Y397 364 aa20.27■□□□□ 0.84
CDK11B-205ENST00000611150 CCDC186Q7Z3E2 898 aa20.27■□□□□ 0.83
CDK11B-205ENST00000611150 TADA2BQ86TJ2 420 aa20.27■□□□□ 0.83
CDK11B-205ENST00000611150 TEX13AQ9BXU3 409 aaPredicted RBP20.27■□□□□ 0.83
CDK11B-205ENST00000611150 MKRN1Q9UHC7 482 aaKnown RBP20.27■□□□□ 0.83
CDK11B-205ENST00000611150 CCDC171Q6TFL3 1326 aa20.27■□□□□ 0.83
CDK11B-205ENST00000611150 YEATS2Q9ULM3 1422 aa20.27■□□□□ 0.83
CDK11B-205ENST00000611150 RPS6KA5O75582 802 aa20.26■□□□□ 0.83
CDK11B-205ENST00000611150 GBP6Q6ZN66 633 aa20.26■□□□□ 0.83
CDK11B-205ENST00000611150 MAGI2Q86UL8 1455 aa20.26■□□□□ 0.83
CDK11B-205ENST00000611150 GNL3LQ9NVN8 582 aaKnown RBP20.26■□□□□ 0.83
CDK11B-205ENST00000611150 CCDC183Q5T5S1 534 aa20.25■□□□□ 0.83
CDK11B-205ENST00000611150 FILIP1Q7Z7B0 1213 aa20.25■□□□□ 0.83
CDK11B-205ENST00000611150 ADAM21Q9UKJ8 722 aa20.25■□□□□ 0.83
CDK11B-205ENST00000611150 CDC42BPAQ5VT25 1732 aa20.24■□□□□ 0.83
CDK11B-205ENST00000611150 A0A087WUV0 522 aaPredicted RBP20.24■□□□□ 0.83
CDK11B-205ENST00000611150 NPHP1O15259 732 aa20.24■□□□□ 0.83
CDK11B-205ENST00000611150 CCT2P78371 535 aaKnown RBP20.24■□□□□ 0.83
CDK11B-205ENST00000611150 SLC24A3Q9HC58 644 aa20.24■□□□□ 0.83
CDK11B-205ENST00000611150 PDRG1Q9NUG6 133 aa20.24■□□□□ 0.83
CDK11B-205ENST00000611150 PTPN14Q15678 1187 aa20.24■□□□□ 0.83
CDK11B-205ENST00000611150 TEX11Q8IYF3 940 aa20.24■□□□□ 0.83
CDK11B-205ENST00000611150 ZCCHC17Q9NP64 241 aaKnown RBP20.24■□□□□ 0.83
CDK11B-205ENST00000611150 ERBB3P21860 1342 aa20.23■□□□□ 0.83
CDK11B-205ENST00000611150 SMC1AQ14683 1233 aaKnown RBP20.23■□□□□ 0.83
CDK11B-205ENST00000611150 ZFYVE16Q7Z3T8 1539 aa20.23■□□□□ 0.83
CDK11B-205ENST00000611150 ELP1O95163 1332 aa20.23■□□□□ 0.83
CDK11B-205ENST00000611150 C1QTNF12Q5T7M4 302 aa20.23■□□□□ 0.83
CDK11B-205ENST00000611150 ERC1Q8IUD2 1116 aa20.23■□□□□ 0.83
CDK11B-205ENST00000611150 KLHL23Q8NBE8 558 aa20.23■□□□□ 0.83
CDK11B-205ENST00000611150 PIK3R5Q8WYR1 880 aa20.23■□□□□ 0.83
CDK11B-205ENST00000611150 SH3GL3Q99963 347 aa20.23■□□□□ 0.83
CDK11B-205ENST00000611150 CPSF2Q9P2I0 782 aaKnown RBP20.23■□□□□ 0.83
CDK11B-205ENST00000611150 ANKRD18BA2A2Z9 1011 aa20.22■□□□□ 0.83
CDK11B-205ENST00000611150 NEFHP12036 1026 aa20.22■□□□□ 0.83
CDK11B-205ENST00000611150 ELF1P32519 619 aa20.22■□□□□ 0.83
CDK11B-205ENST00000611150 A1CFQ9NQ94 594 aaKnown RBP20.22■□□□□ 0.83
CDK11B-205ENST00000611150 SCAF11Q99590 1463 aaKnown RBP20.22■□□□□ 0.83
CDK11B-205ENST00000611150 TRAF1Q13077 416 aa20.22■□□□□ 0.83
CDK11B-205ENST00000611150 NEDD9Q14511 834 aa20.22■□□□□ 0.83
CDK11B-205ENST00000611150 ERCC6LQ2NKX8 1250 aa20.22■□□□□ 0.83
CDK11B-205ENST00000611150 SLC4A1APQ9BWU0 796 aaKnown RBP20.22■□□□□ 0.83
CDK11B-205ENST00000611150 FAM107BQ9H098 131 aa20.22■□□□□ 0.83
CDK11B-205ENST00000611150 ZNF518AQ6AHZ1 1483 aa20.21■□□□□ 0.83
CDK11B-205ENST00000611150 MICALL1Q8N3F8 863 aa20.21■□□□□ 0.83
CDK11B-205ENST00000611150 SUDS3Q9H7L9 328 aaPredicted RBP20.21■□□□□ 0.83
CDK11B-205ENST00000611150 VEZTQ9HBM0 779 aa20.21■□□□□ 0.83
CDK11B-205ENST00000611150 PER1O15534 1290 aaPredicted RBP20.21■□□□□ 0.83
CDK11B-205ENST00000611150 PAX7P23759 505 aa20.21■□□□□ 0.83
CDK11B-205ENST00000611150 TRIM6Q9C030 488 aaPredicted RBP20.21■□□□□ 0.83
CDK11B-205ENST00000611150 GCC2Q8IWJ2 1684 aa20.2■□□□□ 0.82
CDK11B-205ENST00000611150 AP5Z1O43299 807 aa20.2■□□□□ 0.82
CDK11B-205ENST00000611150 GCFC2P16383 781 aaKnown RBP20.2■□□□□ 0.82
CDK11B-205ENST00000611150 WWC2Q6AWC2 1192 aa20.2■□□□□ 0.82
CDK11B-205ENST00000611150 RRP7BPQ9NSQ0 103 aa20.2■□□□□ 0.82
CDK11B-205ENST00000611150 PLXNC1O60486 1568 aa20.19■□□□□ 0.82
CDK11B-205ENST00000611150 MBD5Q9P267 1494 aa20.19■□□□□ 0.82
CDK11B-205ENST00000611150 RWDD2BP57060 319 aa20.19■□□□□ 0.82
CDK11B-205ENST00000611150 LRMPQ12912 555 aa20.19■□□□□ 0.82
CDK11B-205ENST00000611150 ARHGAP29Q52LW3 1261 aa20.19■□□□□ 0.82
CDK11B-205ENST00000611150 CHAMP1Q96JM3 812 aa20.19■□□□□ 0.82
CDK11B-205ENST00000611150 GPATCH8Q9UKJ3 1502 aaKnown RBP20.19■□□□□ 0.82
CDK11B-205ENST00000611150 BMP2KLQ5H9B9 411 aa20.19■□□□□ 0.82
CDK11B-205ENST00000611150 ANKRD45Q5TZF3 282 aa20.19■□□□□ 0.82
CDK11B-205ENST00000611150 ZSCAN25Q6NSZ9 544 aa20.19■□□□□ 0.82
CDK11B-205ENST00000611150 ARMCX6Q7L4S7 300 aa20.19■□□□□ 0.82
CDK11B-205ENST00000611150 CCDC26Q8TAB7 109 aa20.19■□□□□ 0.82
CDK11B-205ENST00000611150 SRRTQ9BXP5 876 aaKnown RBP20.19■□□□□ 0.82
CDK11B-205ENST00000611150 FAM135AQ9P2D6 1515 aa20.18■□□□□ 0.82
CDK11B-205ENST00000611150 CASTP20810 708 aaKnown RBP20.18■□□□□ 0.82
CDK11B-205ENST00000611150 TBC1D8BQ0IIM8 1120 aa20.18■□□□□ 0.82
CDK11B-205ENST00000611150 HDAC1Q13547 482 aaPredicted RBP20.18■□□□□ 0.82
CDK11B-205ENST00000611150 AFAP1Q8N556 730 aa20.18■□□□□ 0.82
CDK11B-205ENST00000611150 ANAPC4Q9UJX5 808 aa20.18■□□□□ 0.82
CDK11B-205ENST00000611150 ABCC1P33527 1531 aa20.18■□□□□ 0.82
CDK11B-205ENST00000611150 EHBP1L1Q8N3D4 1523 aa20.18■□□□□ 0.82
CDK11B-205ENST00000611150 ADAMTSL3P82987 1691 aa20.18■□□□□ 0.82
CDK11B-205ENST00000611150 KINO60870 393 aaKnown RBP20.17■□□□□ 0.82
CDK11B-205ENST00000611150 EIF3JO75822 258 aaKnown RBP20.17■□□□□ 0.82
CDK11B-205ENST00000611150 MX1P20591 662 aa20.17■□□□□ 0.82
CDK11B-205ENST00000611150 HNRNPH1P31943 449 aaKnown RBP20.17■□□□□ 0.82
CDK11B-205ENST00000611150 EIF5P55010 431 aaKnown RBP20.17■□□□□ 0.82
CDK11B-205ENST00000611150 NYAP1Q6ZVC0 841 aa20.17■□□□□ 0.82
CDK11B-205ENST00000611150 SPATS2LQ9NUQ6 558 aaKnown RBP20.17■□□□□ 0.82
CDK11B-205ENST00000611150 ZGPATQ8N5A5 531 aaKnown RBP20.17■□□□□ 0.82
CDK11B-205ENST00000611150 ERLIN2O94905 339 aa20.16■□□□□ 0.82
CDK11B-205ENST00000611150 CWC27Q6UX04 472 aaKnown RBP20.16■□□□□ 0.82
CDK11B-205ENST00000611150 DRC7Q8IY82 874 aa20.16■□□□□ 0.82
CDK11B-205ENST00000611150 GPRASP1Q5JY77 1395 aa20.16■□□□□ 0.82
CDK11B-205ENST00000611150 CRYMQ14894 314 aa20.16■□□□□ 0.82
CDK11B-205ENST00000611150 CARD11Q9BXL7 1154 aa20.16■□□□□ 0.82
CDK11B-205ENST00000611150 NRDCO43847 1150 aa20.15■□□□□ 0.82
CDK11B-205ENST00000611150 SETDB1Q15047 1291 aa20.15■□□□□ 0.82
CDK11B-205ENST00000611150 NUTM1Q86Y26 1132 aa20.15■□□□□ 0.82
CDK11B-205ENST00000611150 ITSN2Q9NZM3 1697 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms