RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 PDZRN3Q9UPQ7 1066 aa19.65■□□□□ 0.74
RTN1-209ENST00000611068 ABCC4O15439 1325 aa19.64■□□□□ 0.74
RTN1-209ENST00000611068 COL18A1P39060 1754 aa19.64■□□□□ 0.73
RTN1-209ENST00000611068 PHKG2P15735 406 aa19.64■□□□□ 0.73
RTN1-209ENST00000611068 SPG7Q9UQ90 795 aa19.64■□□□□ 0.73
RTN1-209ENST00000611068 NUTM2BA6NNL0 878 aaPredicted RBP19.63■□□□□ 0.73
RTN1-209ENST00000611068 NUTM2EB1AL46 878 aaPredicted RBP19.63■□□□□ 0.73
RTN1-209ENST00000611068 NCLP19338 710 aaKnown RBP19.63■□□□□ 0.73
RTN1-209ENST00000611068 CCDC30Q5VVM6 783 aa19.63■□□□□ 0.73
RTN1-209ENST00000611068 NUTM2AQ8IVF1 878 aaPredicted RBP19.63■□□□□ 0.73
RTN1-209ENST00000611068 CHMP5Q9NZZ3 219 aa19.63■□□□□ 0.73
RTN1-209ENST00000611068 CPDO75976 1380 aa19.63■□□□□ 0.73
RTN1-209ENST00000611068 CCDC94Q9BW85 323 aaPredicted RBP19.63■□□□□ 0.73
RTN1-209ENST00000611068 PPP1R9BQ96SB3 815 aa19.62■□□□□ 0.73
RTN1-209ENST00000611068 CHPF2Q9P2E5 772 aa19.62■□□□□ 0.73
RTN1-209ENST00000611068 CCDC173Q0VFZ6 552 aa19.62■□□□□ 0.73
RTN1-209ENST00000611068 FLIIQ13045 1269 aa19.62■□□□□ 0.73
RTN1-209ENST00000611068 MTERF4Q7Z6M4 381 aaKnown RBP19.62■□□□□ 0.73
RTN1-209ENST00000611068 TBC1D32Q96NH3 1257 aa19.62■□□□□ 0.73
RTN1-209ENST00000611068 WDR17Q8IZU2 1322 aa19.61■□□□□ 0.73
RTN1-209ENST00000611068 MEIS3Q99687 375 aa19.61■□□□□ 0.73
RTN1-209ENST00000611068 NCAPD2Q15021 1401 aa19.6■□□□□ 0.73
RTN1-209ENST00000611068 PIP4K2AP48426 406 aaPredicted RBP19.6■□□□□ 0.73
RTN1-209ENST00000611068 IFNL2Q8IZJ0 200 aa19.6■□□□□ 0.73
RTN1-209ENST00000611068 VIRMAQ69YN4 1812 aaKnown RBP19.6■□□□□ 0.73
RTN1-209ENST00000611068 CRYBG1Q9Y4K1 1723 aa19.59■□□□□ 0.73
RTN1-209ENST00000611068 DDX11L8A8MPP1 907 aa19.59■□□□□ 0.73
RTN1-209ENST00000611068 RGS12O14924 1447 aa19.59■□□□□ 0.73
RTN1-209ENST00000611068 DYNC1I1O14576 645 aa19.59■□□□□ 0.73
RTN1-209ENST00000611068 SIRT2Q8IXJ6 389 aa19.59■□□□□ 0.73
RTN1-209ENST00000611068 LRRC37A3O60309 1634 aa19.59■□□□□ 0.73
RTN1-209ENST00000611068 ROBO1Q9Y6N7 1651 aa19.58■□□□□ 0.73
RTN1-209ENST00000611068 APBB1O00213 710 aa19.58■□□□□ 0.72
RTN1-209ENST00000611068 ZBTB22O15209 634 aa19.58■□□□□ 0.72
RTN1-209ENST00000611068 PROSER3Q2NL68 480 aa19.58■□□□□ 0.72
RTN1-209ENST00000611068 KDM6AO15550 1401 aaPredicted RBP19.57■□□□□ 0.72
RTN1-209ENST00000611068 COL5A2P05997 1499 aaPredicted RBP19.57■□□□□ 0.72
RTN1-209ENST00000611068 NASPP49321 788 aaPredicted RBP19.57■□□□□ 0.72
RTN1-209ENST00000611068 ZCRB1Q8TBF4 217 aaKnown RBP19.57■□□□□ 0.72
RTN1-209ENST00000611068 SLC52A2Q9HAB3 445 aa19.57■□□□□ 0.72
RTN1-209ENST00000611068 PTPRCP08575 1304 aa19.56■□□□□ 0.72
RTN1-209ENST00000611068 INTS3Q68E01 1043 aaKnown RBP19.56■□□□□ 0.72
RTN1-209ENST00000611068 LNPKQ9C0E8 428 aa19.56■□□□□ 0.72
RTN1-209ENST00000611068 CBX1P83916 185 aa19.55■□□□□ 0.72
RTN1-209ENST00000611068 AIMP1Q12904 312 aaKnown RBP19.55■□□□□ 0.72
RTN1-209ENST00000611068 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.55■□□□□ 0.72
RTN1-209ENST00000611068 FAM208AQ9UK61 1670 aaKnown RBP19.55■□□□□ 0.72
RTN1-209ENST00000611068 GIGYF1O75420 1035 aaPredicted RBP19.55■□□□□ 0.72
RTN1-209ENST00000611068 CABP4P57796 275 aa19.55■□□□□ 0.72
RTN1-209ENST00000611068 ZNF790Q6PG37 636 aa19.55■□□□□ 0.72
RTN1-209ENST00000611068 JARID2Q92833 1246 aaPredicted RBP19.55■□□□□ 0.72
RTN1-209ENST00000611068 KIF20AO95235 890 aa19.55■□□□□ 0.72
RTN1-209ENST00000611068 IL2RBP14784 551 aa19.55■□□□□ 0.72
RTN1-209ENST00000611068 HDAC1Q13547 482 aaPredicted RBP19.54■□□□□ 0.72
RTN1-209ENST00000611068 BABAM1Q9NWV8 329 aa19.54■□□□□ 0.72
RTN1-209ENST00000611068 LMO7Q8WWI1 1683 aa19.54■□□□□ 0.72
RTN1-209ENST00000611068 LTBP4Q8N2S1 1624 aa19.54■□□□□ 0.72
RTN1-209ENST00000611068 UBAP1LF5GYI3 381 aa19.54■□□□□ 0.72
RTN1-209ENST00000611068 MYL6BP14649 208 aa19.54■□□□□ 0.72
RTN1-209ENST00000611068 ANKRD45Q5TZF3 282 aa19.54■□□□□ 0.72
RTN1-209ENST00000611068 ZNF496Q96IT1 587 aaPredicted RBP19.54■□□□□ 0.72
RTN1-209ENST00000611068 UPF2Q9HAU5 1272 aaKnown RBP19.54■□□□□ 0.72
RTN1-209ENST00000611068 NHSL1Q5SYE7 1610 aa19.53■□□□□ 0.72
RTN1-209ENST00000611068 DCAF5Q96JK2 942 aa19.53■□□□□ 0.72
RTN1-209ENST00000611068 CARD10Q9BWT7 1032 aa19.53■□□□□ 0.72
RTN1-209ENST00000611068 GTPBP4Q9BZE4 634 aaKnown RBP19.53■□□□□ 0.72
RTN1-209ENST00000611068 PI4KAP2A4QPH2 592 aa19.52■□□□□ 0.71
RTN1-209ENST00000611068 PI4KAP1Q8N8J0 262 aa19.52■□□□□ 0.71
RTN1-209ENST00000611068 ZNF500O60304 480 aaPredicted RBP19.51■□□□□ 0.71
RTN1-209ENST00000611068 A0A0G2JS52 829 aa19.51■□□□□ 0.71
RTN1-209ENST00000611068 PTCD1O75127 700 aaKnown RBP19.5■□□□□ 0.71
RTN1-209ENST00000611068 TTC5Q8N0Z6 440 aa19.5■□□□□ 0.71
RTN1-209ENST00000611068 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.5■□□□□ 0.71
RTN1-209ENST00000611068 USP16Q9Y5T5 823 aa19.5■□□□□ 0.71
RTN1-209ENST00000611068 LETM1O95202 739 aaPredicted RBP19.49■□□□□ 0.71
RTN1-209ENST00000611068 TSC1Q92574 1164 aa19.49■□□□□ 0.71
RTN1-209ENST00000611068 NOL7Q9UMY1 257 aaKnown RBP19.49■□□□□ 0.71
RTN1-209ENST00000611068 TOM1O60784 492 aa19.49■□□□□ 0.71
RTN1-209ENST00000611068 TNPO1Q92973 898 aaKnown RBP19.49■□□□□ 0.71
RTN1-209ENST00000611068 ABCA3Q99758 1704 aa19.49■□□□□ 0.71
RTN1-209ENST00000611068 SMC5Q8IY18 1101 aa19.48■□□□□ 0.71
RTN1-209ENST00000611068 KAT6BQ8WYB5 2073 aa19.48■□□□□ 0.71
RTN1-209ENST00000611068 OVOS2A0A0G2JMS6 1433 aa19.48■□□□□ 0.71
RTN1-209ENST00000611068 CCDC9Q9Y3X0 531 aaKnown RBP19.48■□□□□ 0.71
RTN1-209ENST00000611068 CCT4P50991 539 aaKnown RBP19.47■□□□□ 0.71
RTN1-209ENST00000611068 MAPK8IP2Q13387 824 aaPredicted RBP19.47■□□□□ 0.71
RTN1-209ENST00000611068 ATP2B3Q16720 1220 aa19.47■□□□□ 0.71
RTN1-209ENST00000611068 PCDH11XQ9BZA7 1347 aa19.47■□□□□ 0.71
RTN1-209ENST00000611068 PCDH11YQ9BZA8 1340 aa19.47■□□□□ 0.71
RTN1-209ENST00000611068 CEP85Q6P2H3 762 aa19.47■□□□□ 0.71
RTN1-209ENST00000611068 DBF4Q9UBU7 674 aaPredicted RBP19.47■□□□□ 0.71
RTN1-209ENST00000611068 SMARCA5O60264 1052 aaPredicted RBP19.46■□□□□ 0.71
RTN1-209ENST00000611068 IGSF3O75054 1194 aa19.46■□□□□ 0.71
RTN1-209ENST00000611068 SASS6Q6UVJ0 657 aa19.46■□□□□ 0.71
RTN1-209ENST00000611068 KDM3BQ7LBC6 1761 aa19.46■□□□□ 0.71
RTN1-209ENST00000611068 CHD1LQ86WJ1 897 aa19.45■□□□□ 0.7
RTN1-209ENST00000611068 C16orf71Q8IYS4 520 aaPredicted RBP19.45■□□□□ 0.7
RTN1-209ENST00000611068 SYTL4Q96C24 671 aaPredicted RBP19.45■□□□□ 0.7
RTN1-209ENST00000611068 MAP3K2Q9Y2U5 619 aa19.45■□□□□ 0.7
RTN1-209ENST00000611068 NUCB1Q02818 461 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms