RNA–Protein interactions for RNA: ENST00000609293.1

LINC01990-201, Transcript of long intergenic non-protein coding RNA 1990, humanhuman

TSL 1 (best) BASIC

Gene LINC01990, Length 1,487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01990-201ENST00000609293 GJD4Q96KN9 370 aaPredicted RBP11.47□□□□□ -0.57
LINC01990-201ENST00000609293 GLI3P10071 1580 aa11.47□□□□□ -0.57
LINC01990-201ENST00000609293 LRP5O75197 1615 aa11.46□□□□□ -0.57
LINC01990-201ENST00000609293 BLMP54132 1417 aaPredicted RBP11.46□□□□□ -0.57
LINC01990-201ENST00000609293 ESCO1Q5FWF5 840 aa11.46□□□□□ -0.57
LINC01990-201ENST00000609293 GPCPD1Q9NPB8 672 aa11.46□□□□□ -0.57
LINC01990-201ENST00000609293 WNT7BP56706 349 aa11.45□□□□□ -0.58
LINC01990-201ENST00000609293 VSIG10Q8N0Z9 540 aa11.45□□□□□ -0.58
LINC01990-201ENST00000609293 KIF1AQ12756 1690 aa11.45□□□□□ -0.58
LINC01990-201ENST00000609293 USP32Q8NFA0 1604 aa11.45□□□□□ -0.58
LINC01990-201ENST00000609293 RALGAPBQ86X10 1494 aa11.45□□□□□ -0.58
LINC01990-201ENST00000609293 LRPPRCP42704 1394 aaKnown RBP11.45□□□□□ -0.58
LINC01990-201ENST00000609293 XPCQ01831 940 aaPredicted RBP11.44□□□□□ -0.58
LINC01990-201ENST00000609293 NUTM1Q86Y26 1132 aa11.44□□□□□ -0.58
LINC01990-201ENST00000609293 SENP2Q9HC62 589 aa11.44□□□□□ -0.58
LINC01990-201ENST00000609293 WFS1O76024 890 aa11.44□□□□□ -0.58
LINC01990-201ENST00000609293 SF3B2Q13435 895 aaKnown RBP11.44□□□□□ -0.58
LINC01990-201ENST00000609293 CCDC102AQ96A19 550 aa11.44□□□□□ -0.58
LINC01990-201ENST00000609293 PLCH1Q4KWH8 1693 aa11.44□□□□□ -0.58
LINC01990-201ENST00000609293 FMN2Q9NZ56 1722 aa11.43□□□□□ -0.58
LINC01990-201ENST00000609293 FOXO3O43524 673 aa11.43□□□□□ -0.58
LINC01990-201ENST00000609293 JUNDP17535 347 aa11.43□□□□□ -0.58
LINC01990-201ENST00000609293 UNC5CLQ8IV45 518 aa11.43□□□□□ -0.58
LINC01990-201ENST00000609293 SLIT2O94813 1529 aa11.43□□□□□ -0.58
LINC01990-201ENST00000609293 KNDC1Q76NI1 1749 aa11.42□□□□□ -0.58
LINC01990-201ENST00000609293 NWD2Q9ULI1 1742 aa11.42□□□□□ -0.58
LINC01990-201ENST00000609293 NAIPQ13075 1403 aa11.42□□□□□ -0.58
LINC01990-201ENST00000609293 RPGRIP1LQ68CZ1 1315 aa11.42□□□□□ -0.58
LINC01990-201ENST00000609293 RC3H1Q5TC82 1133 aaKnown RBP11.42□□□□□ -0.58
LINC01990-201ENST00000609293 ATP13A2Q9NQ11 1180 aa11.42□□□□□ -0.58
LINC01990-201ENST00000609293 RGPD8O14715 1765 aaPredicted RBP11.42□□□□□ -0.58
LINC01990-201ENST00000609293 IFT172Q9UG01 1749 aa11.41□□□□□ -0.58
LINC01990-201ENST00000609293 J3QL48 77 aa11.41□□□□□ -0.58
LINC01990-201ENST00000609293 DEFB132Q7Z7B7 95 aa11.41□□□□□ -0.58
LINC01990-201ENST00000609293 HLA-CQ95604 372 aa11.41□□□□□ -0.58
LINC01990-201ENST00000609293 FAM217BQ9NTX9 383 aaPredicted RBP11.41□□□□□ -0.58
LINC01990-201ENST00000609293 ABCA3Q99758 1704 aa11.4□□□□□ -0.58
LINC01990-201ENST00000609293 CCDC144AA2RUR9 1427 aa11.4□□□□□ -0.58
LINC01990-201ENST00000609293 RETREG3Q86VR2 466 aa11.39□□□□□ -0.59
LINC01990-201ENST00000609293 KIFC2Q96AC6 838 aa11.39□□□□□ -0.59
LINC01990-201ENST00000609293 SPATA31A3Q5VYP0 1347 aa11.39□□□□□ -0.59
LINC01990-201ENST00000609293 SEPT12Q8IYM1 358 aa11.38□□□□□ -0.59
LINC01990-201ENST00000609293 RGPD1P0DJD0 1748 aa11.38□□□□□ -0.59
LINC01990-201ENST00000609293 TECPR2O15040 1411 aa11.38□□□□□ -0.59
LINC01990-201ENST00000609293 TRIM47Q96LD4 638 aa11.37□□□□□ -0.59
LINC01990-201ENST00000609293 NUDT12Q9BQG2 462 aa11.37□□□□□ -0.59
LINC01990-201ENST00000609293 STK26Q9P289 416 aa11.37□□□□□ -0.59
LINC01990-201ENST00000609293 CCDC9Q9Y3X0 531 aaKnown RBP11.37□□□□□ -0.59
LINC01990-201ENST00000609293 TNS3Q68CZ2 1445 aa11.36□□□□□ -0.59
LINC01990-201ENST00000609293 RRBP1Q9P2E9 1410 aaKnown RBP11.36□□□□□ -0.59
LINC01990-201ENST00000609293 SKOR1P84550 965 aa11.36□□□□□ -0.59
LINC01990-201ENST00000609293 GUCA2AQ02747 115 aa11.36□□□□□ -0.59
LINC01990-201ENST00000609293 VPS72Q15906 364 aa11.36□□□□□ -0.59
LINC01990-201ENST00000609293 KRT28Q7Z3Y7 464 aa11.36□□□□□ -0.59
LINC01990-201ENST00000609293 KRT27Q7Z3Y8 459 aa11.36□□□□□ -0.59
LINC01990-201ENST00000609293 WAPLQ7Z5K2 1190 aa11.36□□□□□ -0.59
LINC01990-201ENST00000609293 HPS1Q92902 700 aa11.36□□□□□ -0.59
LINC01990-201ENST00000609293 NRAPQ86VF7 1730 aa11.35□□□□□ -0.59
LINC01990-201ENST00000609293 BAG6P46379 1132 aa11.35□□□□□ -0.59
LINC01990-201ENST00000609293 PLEKHH1Q9ULM0 1364 aa11.34□□□□□ -0.59
LINC01990-201ENST00000609293 ALDH1A1P00352 501 aa11.34□□□□□ -0.59
LINC01990-201ENST00000609293 FDX1P10109 184 aa11.34□□□□□ -0.59
LINC01990-201ENST00000609293 NFX1Q12986 1120 aaKnown RBP11.34□□□□□ -0.59
LINC01990-201ENST00000609293 PPARGC1BQ86YN6 1023 aaKnown RBP11.34□□□□□ -0.59
LINC01990-201ENST00000609293 ABCC11Q96J66 1382 aa11.33□□□□□ -0.6
LINC01990-201ENST00000609293 PSME1Q06323 249 aa11.33□□□□□ -0.6
LINC01990-201ENST00000609293 EHBP1Q8NDI1 1231 aa11.33□□□□□ -0.6
LINC01990-201ENST00000609293 SYMPKQ92797 1274 aaKnown RBP11.33□□□□□ -0.6
LINC01990-201ENST00000609293 ADGRF5Q8IZF2 1346 aa11.33□□□□□ -0.6
LINC01990-201ENST00000609293 C6orf229H3BNL8 230 aa11.32□□□□□ -0.6
LINC01990-201ENST00000609293 HRCP23327 699 aa11.32□□□□□ -0.6
LINC01990-201ENST00000609293 INSM1Q01101 510 aaPredicted RBP11.32□□□□□ -0.6
LINC01990-201ENST00000609293 CABLES1Q8TDN4 633 aa11.32□□□□□ -0.6
LINC01990-201ENST00000609293 ARHGEF10O15013 1369 aa11.32□□□□□ -0.6
LINC01990-201ENST00000609293 MS4A1P11836 297 aa11.32□□□□□ -0.6
LINC01990-201ENST00000609293 SNRPBP14678 240 aaKnown RBP11.32□□□□□ -0.6
LINC01990-201ENST00000609293 YTHDC2Q9H6S0 1430 aaKnown RBP11.32□□□□□ -0.6
LINC01990-201ENST00000609293 TNS1Q9HBL0 1735 aaKnown RBP11.32□□□□□ -0.6
LINC01990-201ENST00000609293 COL14A1Q05707 1796 aaKnown RBP11.31□□□□□ -0.6
LINC01990-201ENST00000609293 SBNO1A3KN83 1393 aa11.31□□□□□ -0.6
LINC01990-201ENST00000609293 ANKRD30BQ9BXX2 1392 aa11.31□□□□□ -0.6
LINC01990-201ENST00000609293 WIPF1O43516 503 aa11.31□□□□□ -0.6
LINC01990-201ENST00000609293 RGL3Q3MIN7 710 aa11.31□□□□□ -0.6
LINC01990-201ENST00000609293 TMEM132EQ6IEE7 984 aa11.31□□□□□ -0.6
LINC01990-201ENST00000609293 NRXN1Q9ULB1 1477 aa11.31□□□□□ -0.6
LINC01990-201ENST00000609293 PIK3C2GO75747 1445 aa11.3□□□□□ -0.6
LINC01990-201ENST00000609293 TERTO14746 1132 aaKnown RBP11.3□□□□□ -0.6
LINC01990-201ENST00000609293 CCNYL3P0C7X3 344 aa11.3□□□□□ -0.6
LINC01990-201ENST00000609293 SSTR3P32745 418 aaPredicted RBP11.3□□□□□ -0.6
LINC01990-201ENST00000609293 WASF2Q9Y6W5 498 aa11.3□□□□□ -0.6
LINC01990-201ENST00000609293 TRPM3Q9HCF6 1732 aaPredicted RBP11.3□□□□□ -0.6
LINC01990-201ENST00000609293 ADGRB2O60241 1585 aa11.29□□□□□ -0.6
LINC01990-201ENST00000609293 ALS2Q96Q42 1657 aa11.28□□□□□ -0.6
LINC01990-201ENST00000609293 SPATA31E1Q6ZUB1 1445 aa11.28□□□□□ -0.6
LINC01990-201ENST00000609293 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.28□□□□□ -0.6
LINC01990-201ENST00000609293 FAM83GA6ND36 823 aa11.27□□□□□ -0.6
LINC01990-201ENST00000609293 R3HDM1Q15032 1099 aaKnown RBP11.27□□□□□ -0.6
LINC01990-201ENST00000609293 PTPRNQ16849 979 aa11.27□□□□□ -0.6
LINC01990-201ENST00000609293 PTCRAQ6ISU1 281 aaPredicted RBP11.27□□□□□ -0.6
LINC01990-201ENST00000609293 THSD7AQ9UPZ6 1657 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms