RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 UNC5CLQ8IV45 518 aa17.75■□□□□ 0.43
CTCFL-219ENST00000608720 SYCE3A1L190 88 aa17.74■□□□□ 0.43
CTCFL-219ENST00000608720 HSPA4P34932 840 aa17.74■□□□□ 0.43
CTCFL-219ENST00000608720 POLA2Q14181 598 aa17.74■□□□□ 0.43
CTCFL-219ENST00000608720 CHMP4AQ9BY43 222 aa17.74■□□□□ 0.43
CTCFL-219ENST00000608720 NOL7Q9UMY1 257 aaKnown RBP17.74■□□□□ 0.43
CTCFL-219ENST00000608720 XRN1Q8IZH2 1706 aaKnown RBP17.74■□□□□ 0.43
CTCFL-219ENST00000608720 CHAMP1Q96JM3 812 aa17.74■□□□□ 0.43
CTCFL-219ENST00000608720 NSFL1CQ9UNZ2 370 aaKnown RBP17.74■□□□□ 0.43
CTCFL-219ENST00000608720 DIP2AQ14689 1571 aa17.73■□□□□ 0.43
CTCFL-219ENST00000608720 PPP1R42Q7Z4L9 355 aa17.73■□□□□ 0.43
CTCFL-219ENST00000608720 ANKARQ7Z5J8 1434 aa17.73■□□□□ 0.43
CTCFL-219ENST00000608720 SYAP1Q96A49 352 aaPredicted RBP17.73■□□□□ 0.43
CTCFL-219ENST00000608720 IL1RAPL2Q9NP60 686 aa17.73■□□□□ 0.43
CTCFL-219ENST00000608720 SURF6O75683 361 aaKnown RBP17.72■□□□□ 0.43
CTCFL-219ENST00000608720 PLEKHG5O94827 1062 aa17.72■□□□□ 0.43
CTCFL-219ENST00000608720 NUTM1Q86Y26 1132 aa17.72■□□□□ 0.43
CTCFL-219ENST00000608720 FAM208AQ9UK61 1670 aaKnown RBP17.72■□□□□ 0.43
CTCFL-219ENST00000608720 WDR33Q9C0J8 1336 aaKnown RBP17.72■□□□□ 0.43
CTCFL-219ENST00000608720 NOL8Q76FK4 1167 aaKnown RBP17.71■□□□□ 0.43
CTCFL-219ENST00000608720 RHPN1Q8TCX5 695 aa17.71■□□□□ 0.43
CTCFL-219ENST00000608720 KIF1BPQ96EK5 621 aa17.71■□□□□ 0.43
CTCFL-219ENST00000608720 UPF3BQ9BZI7 483 aaKnown RBP17.71■□□□□ 0.43
CTCFL-219ENST00000608720 PHAXQ9H814 394 aaKnown RBP17.71■□□□□ 0.43
CTCFL-219ENST00000608720 SLIT1O75093 1534 aa17.71■□□□□ 0.43
CTCFL-219ENST00000608720 NWD1Q149M9 1564 aa17.71■□□□□ 0.43
CTCFL-219ENST00000608720 PIK3C2AO00443 1686 aa17.71■□□□□ 0.43
CTCFL-219ENST00000608720 ARHGAP23Q9P227 1491 aa17.71■□□□□ 0.43
CTCFL-219ENST00000608720 DYNC1I1O14576 645 aa17.7■□□□□ 0.42
CTCFL-219ENST00000608720 HOXB7P09629 217 aa17.7■□□□□ 0.42
CTCFL-219ENST00000608720 MCM5P33992 734 aa17.7■□□□□ 0.42
CTCFL-219ENST00000608720 HSP90AB4PQ58FF6 505 aa17.7■□□□□ 0.42
CTCFL-219ENST00000608720 ABTB2Q8N961 1025 aa17.7■□□□□ 0.42
CTCFL-219ENST00000608720 PI4K2BQ8TCG2 481 aa17.7■□□□□ 0.42
CTCFL-219ENST00000608720 LTV1Q96GA3 475 aaPredicted RBP17.7■□□□□ 0.42
CTCFL-219ENST00000608720 SGSM2O43147 1006 aa17.7■□□□□ 0.42
CTCFL-219ENST00000608720 NUTM2GQ5VZR2 741 aa17.7■□□□□ 0.42
CTCFL-219ENST00000608720 TUBGCP6Q96RT7 1819 aa17.7■□□□□ 0.42
CTCFL-219ENST00000608720 PHF14O94880 888 aa17.69■□□□□ 0.42
CTCFL-219ENST00000608720 CSPP1Q1MSJ5 1256 aa17.69■□□□□ 0.42
CTCFL-219ENST00000608720 CNTROBQ8N137 903 aa17.69■□□□□ 0.42
CTCFL-219ENST00000608720 SRGAP3O43295 1099 aa17.68■□□□□ 0.42
CTCFL-219ENST00000608720 IL25Q9H293 177 aa17.68■□□□□ 0.42
CTCFL-219ENST00000608720 TSPY26PQ9H489 355 aa17.68■□□□□ 0.42
CTCFL-219ENST00000608720 CCDC39Q9UFE4 941 aa17.68■□□□□ 0.42
CTCFL-219ENST00000608720 RAD50Q92878 1312 aa17.68■□□□□ 0.42
CTCFL-219ENST00000608720 CEMIPQ8WUJ3 1361 aa17.68■□□□□ 0.42
CTCFL-219ENST00000608720 EIF4A1P60842 406 aaKnown RBP17.68■□□□□ 0.42
CTCFL-219ENST00000608720 THEMISQ8N1K5 641 aaPredicted RBP17.68■□□□□ 0.42
CTCFL-219ENST00000608720 CACNA1FO60840 1977 aa17.67■□□□□ 0.42
CTCFL-219ENST00000608720 BEND3Q5T5X7 828 aa17.67■□□□□ 0.42
CTCFL-219ENST00000608720 UTP14CQ5TAP6 766 aaKnown RBP17.67■□□□□ 0.42
CTCFL-219ENST00000608720 DNAAF4Q8WXU2 420 aa17.67■□□□□ 0.42
CTCFL-219ENST00000608720 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.67■□□□□ 0.42
CTCFL-219ENST00000608720 ZKSCAN5Q9Y2L8 839 aa17.67■□□□□ 0.42
CTCFL-219ENST00000608720 EIF2S2P20042 333 aaKnown RBP17.66■□□□□ 0.42
CTCFL-219ENST00000608720 LSG1Q9H089 658 aaKnown RBP17.66■□□□□ 0.42
CTCFL-219ENST00000608720 SNX14Q9Y5W7 946 aa17.66■□□□□ 0.42
CTCFL-219ENST00000608720 N4BP2Q86UW6 1770 aaPredicted RBP17.66■□□□□ 0.42
CTCFL-219ENST00000608720 USP42Q9H9J4 1324 aaKnown RBP17.66■□□□□ 0.42
CTCFL-219ENST00000608720 MAP4K4O95819 1239 aaPredicted RBP17.66■□□□□ 0.42
CTCFL-219ENST00000608720 USP48Q86UV5 1035 aa17.66■□□□□ 0.42
CTCFL-219ENST00000608720 TMEM87AQ8NBN3 555 aa17.66■□□□□ 0.42
CTCFL-219ENST00000608720 NBPF7P0C2Y1 421 aaPredicted RBP17.65■□□□□ 0.42
CTCFL-219ENST00000608720 IP6K1Q92551 441 aa17.65■□□□□ 0.42
CTCFL-219ENST00000608720 TTC14Q96N46 770 aa17.65■□□□□ 0.42
CTCFL-219ENST00000608720 TTC41PQ6P2S7 1318 aa17.65■□□□□ 0.42
CTCFL-219ENST00000608720 RBM10P98175 930 aaKnown RBP17.64■□□□□ 0.42
CTCFL-219ENST00000608720 USHBP1Q8N6Y0 703 aa17.64■□□□□ 0.42
CTCFL-219ENST00000608720 LIMCH1Q9UPQ0 1083 aa17.64■□□□□ 0.42
CTCFL-219ENST00000608720 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.64■□□□□ 0.42
CTCFL-219ENST00000608720 PI4KAP2A4QPH2 592 aa17.64■□□□□ 0.41
CTCFL-219ENST00000608720 PI4KAP1Q8N8J0 262 aa17.64■□□□□ 0.41
CTCFL-219ENST00000608720 CHPF2Q9P2E5 772 aa17.64■□□□□ 0.41
CTCFL-219ENST00000608720 R3HCC1Q9Y3T6 440 aaKnown RBP17.64■□□□□ 0.41
CTCFL-219ENST00000608720 GLRX3O76003 335 aaKnown RBP17.63■□□□□ 0.41
CTCFL-219ENST00000608720 RNF214Q8ND24 703 aa17.63■□□□□ 0.41
CTCFL-219ENST00000608720 FAM13BQ9NYF5 915 aa17.63■□□□□ 0.41
CTCFL-219ENST00000608720 GADD45BO75293 160 aaPredicted RBP17.63■□□□□ 0.41
CTCFL-219ENST00000608720 FAM184AQ8NB25 1140 aa17.63■□□□□ 0.41
CTCFL-219ENST00000608720 RUFY2Q8WXA3 655 aa17.63■□□□□ 0.41
CTCFL-219ENST00000608720 UQCRHLA0A096LP55 91 aa17.62■□□□□ 0.41
CTCFL-219ENST00000608720 UQCRHP07919 91 aa17.62■□□□□ 0.41
CTCFL-219ENST00000608720 ZSCAN22P10073 491 aaPredicted RBP17.62■□□□□ 0.41
CTCFL-219ENST00000608720 KCNA6P17658 529 aa17.62■□□□□ 0.41
CTCFL-219ENST00000608720 AK2P54819 239 aa17.62■□□□□ 0.41
CTCFL-219ENST00000608720 MTX1Q13505 466 aa17.62■□□□□ 0.41
CTCFL-219ENST00000608720 UVSSAQ2YD98 709 aa17.62■□□□□ 0.41
CTCFL-219ENST00000608720 LGR6Q9HBX8 967 aa17.62■□□□□ 0.41
CTCFL-219ENST00000608720 RPAP1Q9BWH6 1393 aaPredicted RBP17.62■□□□□ 0.41
CTCFL-219ENST00000608720 USP54Q70EL1 1684 aa17.62■□□□□ 0.41
CTCFL-219ENST00000608720 LETM1O95202 739 aaPredicted RBP17.62■□□□□ 0.41
CTCFL-219ENST00000608720 FOXD4L6Q3SYB3 417 aaPredicted RBP17.62■□□□□ 0.41
CTCFL-219ENST00000608720 FOXD4L3Q6VB84 417 aaPredicted RBP17.62■□□□□ 0.41
CTCFL-219ENST00000608720 RASEFQ8IZ41 740 aa17.62■□□□□ 0.41
CTCFL-219ENST00000608720 GDPD2Q9HCC8 539 aa17.62■□□□□ 0.41
CTCFL-219ENST00000608720 HDAC5Q9UQL6 1122 aa17.62■□□□□ 0.41
CTCFL-219ENST00000608720 RGPD8O14715 1765 aaPredicted RBP17.61■□□□□ 0.41
CTCFL-219ENST00000608720 OS9Q13438 667 aaPredicted RBP17.61■□□□□ 0.41
CTCFL-219ENST00000608720 NBPF6Q5VWK0 638 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms