RNA–Protein interactions for RNA: ENST00000608254.1

PTCHD1-AS-202, Transcript of PTCHD1 antisense RNA (head to head), humanhuman

TSL 4 BASIC

Gene PTCHD1-AS, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-AS-202ENST00000608254 SOS1Q07889 1333 aaPredicted RBP15.53■□□□□ 0.08
PTCHD1-AS-202ENST00000608254 RPS6KA4O75676 772 aa15.53■□□□□ 0.08
PTCHD1-AS-202ENST00000608254 KRT24Q2M2I5 525 aa15.53■□□□□ 0.08
PTCHD1-AS-202ENST00000608254 DUSP27Q5VZP5 1158 aa15.53■□□□□ 0.08
PTCHD1-AS-202ENST00000608254 C8orf58Q8NAV2 365 aa15.53■□□□□ 0.08
PTCHD1-AS-202ENST00000608254 NUP188Q5SRE5 1749 aa15.52■□□□□ 0.08
PTCHD1-AS-202ENST00000608254 GNPATO15228 680 aa15.52■□□□□ 0.08
PTCHD1-AS-202ENST00000608254 TRMT2AQ8IZ69 625 aaKnown RBP15.52■□□□□ 0.08
PTCHD1-AS-202ENST00000608254 FLAD1Q8NFF5 587 aa15.52■□□□□ 0.08
PTCHD1-AS-202ENST00000608254 CDCA7LQ96GN5 454 aa15.52■□□□□ 0.08
PTCHD1-AS-202ENST00000608254 CHMP4AQ9BY43 222 aa15.52■□□□□ 0.08
PTCHD1-AS-202ENST00000608254 RTCBQ9Y3I0 505 aaKnown RBP15.52■□□□□ 0.08
PTCHD1-AS-202ENST00000608254 C5P01031 1676 aa15.51■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 A1BGP04217 495 aa15.51■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 SSFA2P28290 1259 aa15.51■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 R3HDM1Q15032 1099 aaKnown RBP15.51■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 ZBTB1Q9Y2K1 713 aa15.51■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 TJP1Q07157 1748 aa15.51■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 ERBB4Q15303 1308 aa15.5■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 ELL2O00472 640 aaPredicted RBP15.5■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 ADRA2BP18089 450 aa15.5■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 EIF2S2P20042 333 aaKnown RBP15.5■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 CANXP27824 592 aaKnown RBP15.5■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 IL6STP40189 918 aaPredicted RBP15.5■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 EXOSC9Q06265 439 aaKnown RBP15.5■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 C4BP0C0L5 1744 aa15.5■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.49■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 TWISTNBQ3B726 338 aaPredicted RBP15.49■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 TRAPPC3LQ5T215 181 aa15.49■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 HDGFL1Q5TGJ6 251 aa15.49■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 TSPYL6Q8N831 410 aa15.49■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 PNPLA7Q6ZV29 1317 aa15.48■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 EIF5P55010 431 aaKnown RBP15.48■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 AMIGO3Q86WK7 504 aa15.48■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 A0A087WZG4 1122 aa15.47■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 PSDA5PKW4 1024 aaPredicted RBP15.47■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 NBPF26B4DH59 902 aa15.47■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 VAMP4O75379 141 aa15.47■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 PHF14O94880 888 aa15.47■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 COL5A3P25940 1745 aaPredicted RBP15.47■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 NBPF10Q6P3W6 841 aaKnown RBP15.47■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 NPM2Q86SE8 214 aaKnown RBP15.47■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 COL23A1Q86Y22 540 aaPredicted RBP15.47■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 NBPF15Q8N660 670 aa15.47■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 ARHGEF1Q92888 912 aaKnown RBP15.47■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 PDIA6Q15084 440 aa15.46■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 CCDC30Q5VVM6 783 aa15.46■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 SMIM5Q71RC9 77 aa15.46■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 NECTIN2Q92692 538 aa15.46■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 DDX21Q9NR30 783 aaKnown RBP eCLIP15.46■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 DBF4Q9UBU7 674 aaPredicted RBP15.46■□□□□ 0.07
PTCHD1-AS-202ENST00000608254 TAF1LQ8IZX4 1826 aa15.45■□□□□ 0.06
PTCHD1-AS-202ENST00000608254 MSH5O43196 834 aa15.45■□□□□ 0.06
PTCHD1-AS-202ENST00000608254 RFC4P35249 363 aa15.45■□□□□ 0.06
PTCHD1-AS-202ENST00000608254 PIP4K2AP48426 406 aaPredicted RBP15.45■□□□□ 0.06
PTCHD1-AS-202ENST00000608254 SLC16A10Q8TF71 515 aa15.45■□□□□ 0.06
PTCHD1-AS-202ENST00000608254 CT47B1P0C2W7 299 aaPredicted RBP15.44■□□□□ 0.06
PTCHD1-AS-202ENST00000608254 MYL6BP14649 208 aa15.44■□□□□ 0.06
PTCHD1-AS-202ENST00000608254 YTHDC1Q96MU7 727 aaKnown RBP15.44■□□□□ 0.06
PTCHD1-AS-202ENST00000608254 CHPF2Q9P2E5 772 aa15.44■□□□□ 0.06
PTCHD1-AS-202ENST00000608254 ZNF330Q9Y3S2 320 aaPredicted RBP15.44■□□□□ 0.06
PTCHD1-AS-202ENST00000608254 COL15A1P39059 1388 aa15.44■□□□□ 0.06
PTCHD1-AS-202ENST00000608254 PROSER3Q2NL68 480 aa15.43■□□□□ 0.06
PTCHD1-AS-202ENST00000608254 LRP10Q7Z4F1 713 aa15.43■□□□□ 0.06
PTCHD1-AS-202ENST00000608254 ZNF428Q96B54 188 aa15.43■□□□□ 0.06
PTCHD1-AS-202ENST00000608254 STK31Q9BXU1 1019 aa15.43■□□□□ 0.06
PTCHD1-AS-202ENST00000608254 PDGFDQ9GZP0 370 aaPredicted RBP15.43■□□□□ 0.06
PTCHD1-AS-202ENST00000608254 HYPKQ9NX55 129 aa15.43■□□□□ 0.06
PTCHD1-AS-202ENST00000608254 NARFQ9UHQ1 456 aa15.43■□□□□ 0.06
PTCHD1-AS-202ENST00000608254 ZPR1O75312 459 aa15.42■□□□□ 0.06
PTCHD1-AS-202ENST00000608254 USP42Q9H9J4 1324 aaKnown RBP15.42■□□□□ 0.06
PTCHD1-AS-202ENST00000608254 LAMB4A4D0S4 1761 aa15.41■□□□□ 0.06
PTCHD1-AS-202ENST00000608254 ANXA1P04083 346 aa15.41■□□□□ 0.06
PTCHD1-AS-202ENST00000608254 DZIP3Q86Y13 1208 aaKnown RBP15.41■□□□□ 0.06
PTCHD1-AS-202ENST00000608254 ARXQ96QS3 562 aa15.41■□□□□ 0.06
PTCHD1-AS-202ENST00000608254 TBC1D2BQ9UPU7 963 aa15.41■□□□□ 0.06
PTCHD1-AS-202ENST00000608254 RGL2O15211 777 aa15.4■□□□□ 0.06
PTCHD1-AS-202ENST00000608254 SLC4A2P04920 1241 aa15.4■□□□□ 0.06
PTCHD1-AS-202ENST00000608254 MTFR1LQ9H019 292 aa15.4■□□□□ 0.06
PTCHD1-AS-202ENST00000608254 SRP68Q9UHB9 627 aaKnown RBP15.4■□□□□ 0.06
PTCHD1-AS-202ENST00000608254 MYH14Q7Z406 1995 aaKnown RBP15.39■□□□□ 0.05
PTCHD1-AS-202ENST00000608254 ERVV-1B6SEH8 477 aa15.39■□□□□ 0.05
PTCHD1-AS-202ENST00000608254 TCERG1O14776 1098 aaKnown RBP15.39■□□□□ 0.05
PTCHD1-AS-202ENST00000608254 CAMTA2O94983 1202 aa15.39■□□□□ 0.05
PTCHD1-AS-202ENST00000608254 GYS1P13807 737 aa15.39■□□□□ 0.05
PTCHD1-AS-202ENST00000608254 USPL1Q5W0Q7 1092 aa15.39■□□□□ 0.05
PTCHD1-AS-202ENST00000608254 KIF6Q6ZMV9 814 aa15.39■□□□□ 0.05
PTCHD1-AS-202ENST00000608254 COPS6Q7L5N1 327 aa15.39■□□□□ 0.05
PTCHD1-AS-202ENST00000608254 NLGN1Q8N2Q7 840 aa15.39■□□□□ 0.05
PTCHD1-AS-202ENST00000608254 XAGE3Q8WTP9 111 aa15.39■□□□□ 0.05
PTCHD1-AS-202ENST00000608254 UBR3Q6ZT12 1888 aa15.38■□□□□ 0.05
PTCHD1-AS-202ENST00000608254 QSER1Q2KHR3 1735 aa15.38■□□□□ 0.05
PTCHD1-AS-202ENST00000608254 ZBTB7AO95365 584 aa15.38■□□□□ 0.05
PTCHD1-AS-202ENST00000608254 AIMP1Q12904 312 aaKnown RBP15.38■□□□□ 0.05
PTCHD1-AS-202ENST00000608254 ALDH1L2Q3SY69 923 aa15.38■□□□□ 0.05
PTCHD1-AS-202ENST00000608254 TTLL7Q6ZT98 887 aa15.38■□□□□ 0.05
PTCHD1-AS-202ENST00000608254 CLEC4GQ6UXB4 293 aa15.37■□□□□ 0.05
PTCHD1-AS-202ENST00000608254 PHAXQ9H814 394 aaKnown RBP15.37■□□□□ 0.05
PTCHD1-AS-202ENST00000608254 BCL2L12Q9HB09 334 aa15.37■□□□□ 0.05
PTCHD1-AS-202ENST00000608254 ZNF652Q9Y2D9 606 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms