RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 SRP68Q9UHB9 627 aaKnown RBP19.02■□□□□ 0.64
PKNOX1-210ENST00000607049 NARFQ9UHQ1 456 aa19.02■□□□□ 0.64
PKNOX1-210ENST00000607049 COL15A1P39059 1388 aa19.02■□□□□ 0.64
PKNOX1-210ENST00000607049 TJP1Q07157 1748 aa19.01■□□□□ 0.63
PKNOX1-210ENST00000607049 TGFB2P61812 414 aa19.01■□□□□ 0.63
PKNOX1-210ENST00000607049 USPL1Q5W0Q7 1092 aa19.01■□□□□ 0.63
PKNOX1-210ENST00000607049 SNRPA1P09661 255 aaKnown RBP19■□□□□ 0.63
PKNOX1-210ENST00000607049 DCTN1Q14203 1278 aa19■□□□□ 0.63
PKNOX1-210ENST00000607049 FKBP8Q14318 412 aa19■□□□□ 0.63
PKNOX1-210ENST00000607049 PLEKHF1Q96S99 279 aa19■□□□□ 0.63
PKNOX1-210ENST00000607049 ZNF330Q9Y3S2 320 aaPredicted RBP19■□□□□ 0.63
PKNOX1-210ENST00000607049 LMOD3Q0VAK6 560 aa18.99■□□□□ 0.63
PKNOX1-210ENST00000607049 MYH14Q7Z406 1995 aaKnown RBP18.99■□□□□ 0.63
PKNOX1-210ENST00000607049 VIRMAQ69YN4 1812 aaKnown RBP18.98■□□□□ 0.63
PKNOX1-210ENST00000607049 IL6STP40189 918 aaPredicted RBP18.98■□□□□ 0.63
PKNOX1-210ENST00000607049 YBX3P16989 372 aaKnown RBP eCLIP18.97■□□□□ 0.63
PKNOX1-210ENST00000607049 EIF5P55010 431 aaKnown RBP18.97■□□□□ 0.63
PKNOX1-210ENST00000607049 KCNQ3O43525 872 aa18.96■□□□□ 0.63
PKNOX1-210ENST00000607049 PRKRIP1Q9H875 184 aaPredicted RBP18.96■□□□□ 0.63
PKNOX1-210ENST00000607049 UBR2Q8IWV8 1755 aa18.96■□□□□ 0.63
PKNOX1-210ENST00000607049 RIPK4P57078 832 aa18.95■□□□□ 0.62
PKNOX1-210ENST00000607049 C10orf71Q711Q0 1435 aa18.94■□□□□ 0.62
PKNOX1-210ENST00000607049 A1BGP04217 495 aa18.94■□□□□ 0.62
PKNOX1-210ENST00000607049 TM4SF1P30408 202 aa18.94■□□□□ 0.62
PKNOX1-210ENST00000607049 POLRMTO00411 1230 aaKnown RBP18.93■□□□□ 0.62
PKNOX1-210ENST00000607049 C4AP0C0L4 1744 aa18.93■□□□□ 0.62
PKNOX1-210ENST00000607049 SIPA1L3O60292 1781 aaPredicted RBP18.93■□□□□ 0.62
PKNOX1-210ENST00000607049 A0A0G2JLW4 131 aa18.92■□□□□ 0.62
PKNOX1-210ENST00000607049 DDR1Q08345 913 aa18.92■□□□□ 0.62
PKNOX1-210ENST00000607049 NFIXQ14938 502 aa18.92■□□□□ 0.62
PKNOX1-210ENST00000607049 RUNDC1Q96C34 613 aa18.92■□□□□ 0.62
PKNOX1-210ENST00000607049 MIS18AQ9NYP9 233 aa18.92■□□□□ 0.62
PKNOX1-210ENST00000607049 WWC3Q9ULE0 1092 aa18.92■□□□□ 0.62
PKNOX1-210ENST00000607049 TBC1D2BQ9UPU7 963 aa18.92■□□□□ 0.62
PKNOX1-210ENST00000607049 BCS1LQ9Y276 419 aa18.92■□□□□ 0.62
PKNOX1-210ENST00000607049 USP16Q9Y5T5 823 aa18.92■□□□□ 0.62
PKNOX1-210ENST00000607049 NPHP1O15259 732 aa18.91■□□□□ 0.62
PKNOX1-210ENST00000607049 DPEP1P16444 411 aa18.91■□□□□ 0.62
PKNOX1-210ENST00000607049 TMPOP42166 694 aaKnown RBP18.91■□□□□ 0.62
PKNOX1-210ENST00000607049 ZNF784Q8NCA9 323 aaPredicted RBP18.91■□□□□ 0.62
PKNOX1-210ENST00000607049 PIM2Q9P1W9 311 aa18.91■□□□□ 0.62
PKNOX1-210ENST00000607049 ZNF652Q9Y2D9 606 aa18.91■□□□□ 0.62
PKNOX1-210ENST00000607049 UTRNP46939 3433 aa18.91■□□□□ 0.62
PKNOX1-210ENST00000607049 SERPINB2P05120 415 aa18.9■□□□□ 0.62
PKNOX1-210ENST00000607049 BICDL1Q6ZP65 573 aa18.9■□□□□ 0.62
PKNOX1-210ENST00000607049 DZIP3Q86Y13 1208 aaKnown RBP18.9■□□□□ 0.62
PKNOX1-210ENST00000607049 BABAM1Q9NWV8 329 aa18.9■□□□□ 0.62
PKNOX1-210ENST00000607049 TSPYL4Q9UJ04 414 aa18.9■□□□□ 0.62
PKNOX1-210ENST00000607049 PXDNLA1KZ92 1463 aa18.9■□□□□ 0.62
PKNOX1-210ENST00000607049 ZNF316A6NFI3 1004 aaPredicted RBP18.89■□□□□ 0.61
PKNOX1-210ENST00000607049 CCDC146Q8IYE0 955 aa18.89■□□□□ 0.61
PKNOX1-210ENST00000607049 SETDB2Q96T68 719 aa18.89■□□□□ 0.61
PKNOX1-210ENST00000607049 THUMPD2Q9BTF0 503 aaKnown RBP18.89■□□□□ 0.61
PKNOX1-210ENST00000607049 CHD4Q14839 1912 aa18.89■□□□□ 0.61
PKNOX1-210ENST00000607049 NEUROD2Q15784 382 aa18.88■□□□□ 0.61
PKNOX1-210ENST00000607049 DALRD3Q5D0E6 543 aaKnown RBP18.88■□□□□ 0.61
PKNOX1-210ENST00000607049 BCL2L12Q9HB09 334 aa18.88■□□□□ 0.61
PKNOX1-210ENST00000607049 CLEC4GQ6UXB4 293 aa18.87■□□□□ 0.61
PKNOX1-210ENST00000607049 ADAMTS8Q9UP79 889 aa18.87■□□□□ 0.61
PKNOX1-210ENST00000607049 PDZRN3Q9UPQ7 1066 aa18.87■□□□□ 0.61
PKNOX1-210ENST00000607049 CARMIL3Q8ND23 1372 aa18.86■□□□□ 0.61
PKNOX1-210ENST00000607049 PRAMEF22A3QJZ6 481 aa18.86■□□□□ 0.61
PKNOX1-210ENST00000607049 GIGYF1O75420 1035 aaPredicted RBP18.86■□□□□ 0.61
PKNOX1-210ENST00000607049 EIF4A1P60842 406 aaKnown RBP18.86■□□□□ 0.61
PKNOX1-210ENST00000607049 RGL2O15211 777 aa18.85■□□□□ 0.61
PKNOX1-210ENST00000607049 CAMTA2O94983 1202 aa18.85■□□□□ 0.61
PKNOX1-210ENST00000607049 TBC1D9BQ66K14 1250 aa18.85■□□□□ 0.61
PKNOX1-210ENST00000607049 ARHGAP27Q6ZUM4 889 aa18.85■□□□□ 0.61
PKNOX1-210ENST00000607049 RRP7AQ9Y3A4 280 aaKnown RBP18.85■□□□□ 0.61
PKNOX1-210ENST00000607049 GOLGB1Q14789 3259 aaKnown RBP18.84■□□□□ 0.61
PKNOX1-210ENST00000607049 KIF13BQ9NQT8 1826 aa18.84■□□□□ 0.61
PKNOX1-210ENST00000607049 H0YIN7 160 aa18.84■□□□□ 0.61
PKNOX1-210ENST00000607049 PIP4K2AP48426 406 aaPredicted RBP18.84■□□□□ 0.61
PKNOX1-210ENST00000607049 ST5P78524 1137 aa18.84■□□□□ 0.61
PKNOX1-210ENST00000607049 ANP32CO43423 234 aa18.83■□□□□ 0.6
PKNOX1-210ENST00000607049 PDE6BP35913 854 aa18.83■□□□□ 0.6
PKNOX1-210ENST00000607049 KIF6Q6ZMV9 814 aa18.83■□□□□ 0.6
PKNOX1-210ENST00000607049 CNBD1Q8NA66 436 aa18.83■□□□□ 0.6
PKNOX1-210ENST00000607049 ERBB4Q15303 1308 aa18.82■□□□□ 0.6
PKNOX1-210ENST00000607049 CHRNA5P30532 468 aa18.82■□□□□ 0.6
PKNOX1-210ENST00000607049 CALD1Q05682 793 aaKnown RBP18.82■□□□□ 0.6
PKNOX1-210ENST00000607049 C2CD5Q86YS7 1000 aa18.82■□□□□ 0.6
PKNOX1-210ENST00000607049 BRIP1Q9BX63 1249 aa18.82■□□□□ 0.6
PKNOX1-210ENST00000607049 LAS1LQ9Y4W2 734 aaKnown RBP18.82■□□□□ 0.6
PKNOX1-210ENST00000607049 DLG5Q8TDM6 1919 aa18.81■□□□□ 0.6
PKNOX1-210ENST00000607049 NBPF26B4DH59 902 aa18.81■□□□□ 0.6
PKNOX1-210ENST00000607049 KCNA3P22001 575 aa18.81■□□□□ 0.6
PKNOX1-210ENST00000607049 NBPF10Q6P3W6 841 aaKnown RBP18.81■□□□□ 0.6
PKNOX1-210ENST00000607049 NBPF5PQ86XG9 351 aaPredicted RBP18.81■□□□□ 0.6
PKNOX1-210ENST00000607049 NGEFQ8N5V2 710 aa18.81■□□□□ 0.6
PKNOX1-210ENST00000607049 NBPF15Q8N660 670 aa18.81■□□□□ 0.6
PKNOX1-210ENST00000607049 TPTE2Q6XPS3 522 aa18.8■□□□□ 0.6
PKNOX1-210ENST00000607049 MYL6BP14649 208 aa18.79■□□□□ 0.6
PKNOX1-210ENST00000607049 GTF2E1P29083 439 aaPredicted RBP18.79■□□□□ 0.6
PKNOX1-210ENST00000607049 PRR5LQ6MZQ0 368 aa18.79■□□□□ 0.6
PKNOX1-210ENST00000607049 TTLL6Q8N841 843 aa18.79■□□□□ 0.6
PKNOX1-210ENST00000607049 NIP7Q9Y221 180 aaKnown RBP eCLIP18.79■□□□□ 0.6
PKNOX1-210ENST00000607049 N4BP2Q86UW6 1770 aaPredicted RBP18.78■□□□□ 0.6
PKNOX1-210ENST00000607049 ERVV-1B6SEH8 477 aa18.78■□□□□ 0.6
PKNOX1-210ENST00000607049 EIF2S2P20042 333 aaKnown RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms