RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 TRIM27P14373 513 aa21.09■□□□□ 0.97
PMF1-206ENST00000606952 DBF4Q9UBU7 674 aaPredicted RBP21.09■□□□□ 0.97
PMF1-206ENST00000606952 ABCC4O15439 1325 aa21.08■□□□□ 0.97
PMF1-206ENST00000606952 PXDNLA1KZ92 1463 aa21.08■□□□□ 0.97
PMF1-206ENST00000606952 PDIA6Q15084 440 aa21.08■□□□□ 0.97
PMF1-206ENST00000606952 API5Q9BZZ5 524 aaKnown RBP21.08■□□□□ 0.97
PMF1-206ENST00000606952 DDX21Q9NR30 783 aaKnown RBP eCLIP21.08■□□□□ 0.97
PMF1-206ENST00000606952 USP16Q9Y5T5 823 aa21.08■□□□□ 0.97
PMF1-206ENST00000606952 TCERG1O14776 1098 aaKnown RBP21.07■□□□□ 0.96
PMF1-206ENST00000606952 C20orf194Q5TEA3 1177 aa21.07■□□□□ 0.96
PMF1-206ENST00000606952 LRP10Q7Z4F1 713 aa21.07■□□□□ 0.96
PMF1-206ENST00000606952 FRAT1Q92837 279 aaPredicted RBP21.07■□□□□ 0.96
PMF1-206ENST00000606952 SLC4A9Q96Q91 983 aa21.07■□□□□ 0.96
PMF1-206ENST00000606952 BCL11BQ9C0K0 894 aaPredicted RBP21.07■□□□□ 0.96
PMF1-206ENST00000606952 CHPF2Q9P2E5 772 aa21.07■□□□□ 0.96
PMF1-206ENST00000606952 RGPD3A6NKT7 1758 aaPredicted RBP21.07■□□□□ 0.96
PMF1-206ENST00000606952 RGPD4Q7Z3J3 1758 aa21.07■□□□□ 0.96
PMF1-206ENST00000606952 PTCD1O75127 700 aaKnown RBP21.06■□□□□ 0.96
PMF1-206ENST00000606952 EIF2S2P20042 333 aaKnown RBP21.06■□□□□ 0.96
PMF1-206ENST00000606952 CANXP27824 592 aaKnown RBP21.06■□□□□ 0.96
PMF1-206ENST00000606952 DZIP1LQ8IYY4 767 aaKnown RBP21.06■□□□□ 0.96
PMF1-206ENST00000606952 GTF3C3Q9Y5Q9 886 aa21.06■□□□□ 0.96
PMF1-206ENST00000606952 TNS1Q9HBL0 1735 aaKnown RBP21.05■□□□□ 0.96
PMF1-206ENST00000606952 FLIIQ13045 1269 aa21.05■□□□□ 0.96
PMF1-206ENST00000606952 FKBP8Q14318 412 aa21.05■□□□□ 0.96
PMF1-206ENST00000606952 HYPKQ9NX55 129 aa21.05■□□□□ 0.96
PMF1-206ENST00000606952 TAF1LQ8IZX4 1826 aa21.05■□□□□ 0.96
PMF1-206ENST00000606952 FAM182BQ5T319 152 aa21.04■□□□□ 0.96
PMF1-206ENST00000606952 G2E3Q7L622 706 aa21.04■□□□□ 0.96
PMF1-206ENST00000606952 LOC102724428A0A0B4J2F2 783 aa21.03■□□□□ 0.96
PMF1-206ENST00000606952 RLBP1P12271 317 aa21.03■□□□□ 0.96
PMF1-206ENST00000606952 SIK1P57059 783 aa21.03■□□□□ 0.96
PMF1-206ENST00000606952 PTF1AQ7RTS3 328 aa21.03■□□□□ 0.96
PMF1-206ENST00000606952 DNAJC10Q8IXB1 793 aa21.03■□□□□ 0.96
PMF1-206ENST00000606952 NECTIN2Q92692 538 aa21.03■□□□□ 0.96
PMF1-206ENST00000606952 TNNQ9UQP3 1299 aa21.03■□□□□ 0.96
PMF1-206ENST00000606952 NUP188Q5SRE5 1749 aa21.01■□□□□ 0.95
PMF1-206ENST00000606952 IBTKQ9P2D0 1353 aaPredicted RBP21.01■□□□□ 0.95
PMF1-206ENST00000606952 STARD3NLO95772 234 aa21.01■□□□□ 0.95
PMF1-206ENST00000606952 CYP19A1P11511 503 aaPredicted RBP21.01■□□□□ 0.95
PMF1-206ENST00000606952 IRX6P78412 446 aaPredicted RBP21.01■□□□□ 0.95
PMF1-206ENST00000606952 PROSER3Q2NL68 480 aa21.01■□□□□ 0.95
PMF1-206ENST00000606952 PANK1Q8TE04 598 aa21.01■□□□□ 0.95
PMF1-206ENST00000606952 CRBNQ96SW2 442 aa21.01■□□□□ 0.95
PMF1-206ENST00000606952 RBM42Q9BTD8 480 aaKnown RBP21.01■□□□□ 0.95
PMF1-206ENST00000606952 MYH14Q7Z406 1995 aaKnown RBP21■□□□□ 0.95
PMF1-206ENST00000606952 NBPF26B4DH59 902 aa21■□□□□ 0.95
PMF1-206ENST00000606952 AAMPQ13685 434 aa21■□□□□ 0.95
PMF1-206ENST00000606952 MVPQ14764 893 aaKnown RBP21■□□□□ 0.95
PMF1-206ENST00000606952 NBPF14Q5TI25 921 aa21■□□□□ 0.95
PMF1-206ENST00000606952 NBPF10Q6P3W6 841 aaKnown RBP21■□□□□ 0.95
PMF1-206ENST00000606952 FTSJ3Q8IY81 847 aaKnown RBP21■□□□□ 0.95
PMF1-206ENST00000606952 NBPF15Q8N660 670 aa21■□□□□ 0.95
PMF1-206ENST00000606952 PHAXQ9H814 394 aaKnown RBP21■□□□□ 0.95
PMF1-206ENST00000606952 ARFGEF2Q9Y6D5 1785 aa21■□□□□ 0.95
PMF1-206ENST00000606952 ATP10DQ9P241 1426 aa20.99■□□□□ 0.95
PMF1-206ENST00000606952 INTS3Q68E01 1043 aaKnown RBP20.99■□□□□ 0.95
PMF1-206ENST00000606952 ADCY9O60503 1353 aa20.98■□□□□ 0.95
PMF1-206ENST00000606952 EP400Q96L91 3159 aa20.98■□□□□ 0.95
PMF1-206ENST00000606952 FKBP5Q13451 457 aaPredicted RBP20.97■□□□□ 0.95
PMF1-206ENST00000606952 ITPK1Q13572 414 aa20.97■□□□□ 0.95
PMF1-206ENST00000606952 TMEM57Q8N5G2 664 aa20.97■□□□□ 0.95
PMF1-206ENST00000606952 EXOC6Q8TAG9 804 aa20.97■□□□□ 0.95
PMF1-206ENST00000606952 CLUAP1Q96AJ1 413 aa20.97■□□□□ 0.95
PMF1-206ENST00000606952 ANXA1P04083 346 aa20.96■□□□□ 0.95
PMF1-206ENST00000606952 A1BGP04217 495 aa20.96■□□□□ 0.95
PMF1-206ENST00000606952 ATP6V1AP38606 617 aa20.96■□□□□ 0.95
PMF1-206ENST00000606952 DDX19BQ9UMR2 479 aa20.96■□□□□ 0.95
PMF1-206ENST00000606952 COG6Q9Y2V7 657 aa20.96■□□□□ 0.95
PMF1-206ENST00000606952 CNTNAP4Q9C0A0 1308 aa20.96■□□□□ 0.95
PMF1-206ENST00000606952 DDX58O95786 925 aaKnown RBP20.94■□□□□ 0.94
PMF1-206ENST00000606952 CCT4P50991 539 aaKnown RBP20.94■□□□□ 0.94
PMF1-206ENST00000606952 KSR2Q6VAB6 950 aa20.94■□□□□ 0.94
PMF1-206ENST00000606952 C4BP0C0L5 1744 aa20.94■□□□□ 0.94
PMF1-206ENST00000606952 TRIM37O94972 964 aa20.93■□□□□ 0.94
PMF1-206ENST00000606952 IL6STP40189 918 aaPredicted RBP20.93■□□□□ 0.94
PMF1-206ENST00000606952 RC3H1Q5TC82 1133 aaKnown RBP20.93■□□□□ 0.94
PMF1-206ENST00000606952 XAGE3Q8WTP9 111 aa20.93■□□□□ 0.94
PMF1-206ENST00000606952 BCORQ6W2J9 1755 aa20.92■□□□□ 0.94
PMF1-206ENST00000606952 PLSCR1O15162 318 aa20.92■□□□□ 0.94
PMF1-206ENST00000606952 MYL6BP14649 208 aa20.92■□□□□ 0.94
PMF1-206ENST00000606952 CRKLP46109 303 aaKnown RBP20.92■□□□□ 0.94
PMF1-206ENST00000606952 SLC27A3Q5K4L6 730 aa20.92■□□□□ 0.94
PMF1-206ENST00000606952 INTS5Q6P9B9 1019 aaKnown RBP20.92■□□□□ 0.94
PMF1-206ENST00000606952 COPS6Q7L5N1 327 aa20.92■□□□□ 0.94
PMF1-206ENST00000606952 DNAAF4Q8WXU2 420 aa20.92■□□□□ 0.94
PMF1-206ENST00000606952 CHMP4BQ9H444 224 aaKnown RBP20.92■□□□□ 0.94
PMF1-206ENST00000606952 CCDC87Q9NVE4 849 aa20.92■□□□□ 0.94
PMF1-206ENST00000606952 PPP4R2Q9NY27 417 aa20.92■□□□□ 0.94
PMF1-206ENST00000606952 ANKRD36CQ5JPF3 1778 aa20.92■□□□□ 0.94
PMF1-206ENST00000606952 PI4KAP2A4QPH2 592 aa20.91■□□□□ 0.94
PMF1-206ENST00000606952 F6X3S4 739 aa20.91■□□□□ 0.94
PMF1-206ENST00000606952 HMGB2P26583 209 aaKnown RBP20.91■□□□□ 0.94
PMF1-206ENST00000606952 PI4KAP1Q8N8J0 262 aa20.91■□□□□ 0.94
PMF1-206ENST00000606952 PLBD2Q8NHP8 589 aa20.91■□□□□ 0.94
PMF1-206ENST00000606952 ZBTB1Q9Y2K1 713 aa20.91■□□□□ 0.94
PMF1-206ENST00000606952 ITPRIPQ8IWB1 547 aa20.9■□□□□ 0.94
PMF1-206ENST00000606952 LINC00116Q8NCU8 138 aa20.9■□□□□ 0.94
PMF1-206ENST00000606952 CCNL1Q9UK58 526 aaPredicted RBP20.9■□□□□ 0.94
PMF1-206ENST00000606952 ZBTB7BO15156 539 aaPredicted RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms