RNA–Protein interactions for RNA: ENST00000606570.1

SNX5-218, Transcript of sorting nexin 5, humanhuman

Gene SNX5, Length 3,931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-218ENST00000606570 ADCY2Q08462 1091 aa8.15□□□□□ -1.11
SNX5-218ENST00000606570 LZTS2Q9BRK4 669 aa8.15□□□□□ -1.11
SNX5-218ENST00000606570 POLKQ9UBT6 870 aa8.15□□□□□ -1.11
SNX5-218ENST00000606570 KDM5CP41229 1560 aa8.15□□□□□ -1.11
SNX5-218ENST00000606570 ZMYM4Q5VZL5 1548 aa8.14□□□□□ -1.11
SNX5-218ENST00000606570 TPM1P09493 284 aa8.14□□□□□ -1.11
SNX5-218ENST00000606570 RARSP54136 660 aaKnown RBP8.14□□□□□ -1.11
SNX5-218ENST00000606570 DZIP3Q86Y13 1208 aaKnown RBP8.14□□□□□ -1.11
SNX5-218ENST00000606570 TSPYL2Q9H2G4 693 aaPredicted RBP8.14□□□□□ -1.11
SNX5-218ENST00000606570 UHRF1BP1Q6BDS2 1440 aa8.14□□□□□ -1.11
SNX5-218ENST00000606570 MYBL2P10244 700 aa8.14□□□□□ -1.11
SNX5-218ENST00000606570 RLBP1P12271 317 aa8.14□□□□□ -1.11
SNX5-218ENST00000606570 IRF5Q13568 498 aa8.14□□□□□ -1.11
SNX5-218ENST00000606570 SYNPO2Q9UMS6 1093 aa8.14□□□□□ -1.11
SNX5-218ENST00000606570 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.14□□□□□ -1.11
SNX5-218ENST00000606570 CAMSAP2Q08AD1 1489 aa8.14□□□□□ -1.11
SNX5-218ENST00000606570 C9orf84Q5VXU9 1444 aa8.14□□□□□ -1.11
SNX5-218ENST00000606570 SHTN1A0MZ66 631 aa8.14□□□□□ -1.11
SNX5-218ENST00000606570 HTATSF1O43719 755 aaKnown RBP8.14□□□□□ -1.11
SNX5-218ENST00000606570 RNF214Q8ND24 703 aa8.14□□□□□ -1.11
SNX5-218ENST00000606570 GIMAP7Q8NHV1 300 aa8.14□□□□□ -1.11
SNX5-218ENST00000606570 SUN2Q9UH99 717 aa8.14□□□□□ -1.11
SNX5-218ENST00000606570 KIF14Q15058 1648 aa8.14□□□□□ -1.11
SNX5-218ENST00000606570 FCHSD2O94868 740 aa8.13□□□□□ -1.11
SNX5-218ENST00000606570 ABL2P42684 1182 aa8.13□□□□□ -1.11
SNX5-218ENST00000606570 MCTP1Q6DN14 999 aa8.13□□□□□ -1.11
SNX5-218ENST00000606570 TTLL5Q6EMB2 1281 aa8.13□□□□□ -1.11
SNX5-218ENST00000606570 CAVIN1Q6NZI2 390 aaKnown RBP8.13□□□□□ -1.11
SNX5-218ENST00000606570 CDC37L1Q7L3B6 337 aa8.13□□□□□ -1.11
SNX5-218ENST00000606570 GAS2L3Q86XJ1 694 aa8.13□□□□□ -1.11
SNX5-218ENST00000606570 IQCGQ9H095 443 aaKnown RBP8.13□□□□□ -1.11
SNX5-218ENST00000606570 VEZTQ9HBM0 779 aa8.13□□□□□ -1.11
SNX5-218ENST00000606570 CCDC175P0C221 793 aa8.13□□□□□ -1.11
SNX5-218ENST00000606570 FLT3P36888 993 aa8.13□□□□□ -1.11
SNX5-218ENST00000606570 RWDD2BP57060 319 aa8.13□□□□□ -1.11
SNX5-218ENST00000606570 ANKRD45Q5TZF3 282 aa8.13□□□□□ -1.11
SNX5-218ENST00000606570 IQGAP2Q13576 1575 aa8.13□□□□□ -1.11
SNX5-218ENST00000606570 ANKRD62A6NC57 917 aa8.13□□□□□ -1.11
SNX5-218ENST00000606570 FMNL3Q8IVF7 1028 aa8.13□□□□□ -1.11
SNX5-218ENST00000606570 MRFAP1L1Q96HT8 127 aa8.13□□□□□ -1.11
SNX5-218ENST00000606570 ARHGEF10LQ9HCE6 1279 aa8.13□□□□□ -1.11
SNX5-218ENST00000606570 G3BP2Q9UN86 482 aaKnown RBP8.13□□□□□ -1.11
SNX5-218ENST00000606570 TROQ12816 1431 aaPredicted RBP8.13□□□□□ -1.11
SNX5-218ENST00000606570 XBP1P17861 261 aa8.12□□□□□ -1.11
SNX5-218ENST00000606570 RUNDC1Q96C34 613 aa8.12□□□□□ -1.11
SNX5-218ENST00000606570 SH3GL3Q99963 347 aa8.12□□□□□ -1.11
SNX5-218ENST00000606570 PCDHGA4Q9Y5G9 962 aa8.12□□□□□ -1.11
SNX5-218ENST00000606570 SMC2O95347 1197 aa8.12□□□□□ -1.11
SNX5-218ENST00000606570 CA8P35219 290 aa8.12□□□□□ -1.11
SNX5-218ENST00000606570 MVPQ14764 893 aaKnown RBP8.12□□□□□ -1.11
SNX5-218ENST00000606570 HHATQ5VTY9 493 aa8.12□□□□□ -1.11
SNX5-218ENST00000606570 CCDC70Q6NSX1 233 aa8.12□□□□□ -1.11
SNX5-218ENST00000606570 TRIML1Q8N9V2 468 aa8.12□□□□□ -1.11
SNX5-218ENST00000606570 CCDC191Q8NCU4 936 aa8.12□□□□□ -1.11
SNX5-218ENST00000606570 ZC3H15Q8WU90 426 aaKnown RBP8.12□□□□□ -1.11
SNX5-218ENST00000606570 CRACR2AQ9BSW2 395 aa8.12□□□□□ -1.11
SNX5-218ENST00000606570 TPX2Q9ULW0 747 aaKnown RBP8.12□□□□□ -1.11
SNX5-218ENST00000606570 IFT88Q13099 833 aa8.12□□□□□ -1.11
SNX5-218ENST00000606570 CCDC26Q8TAB7 109 aa8.12□□□□□ -1.11
SNX5-218ENST00000606570 TAF4BQ92750 862 aa8.12□□□□□ -1.11
SNX5-218ENST00000606570 TATDN2Q93075 761 aa8.12□□□□□ -1.11
SNX5-218ENST00000606570 YIPF2Q9BWQ6 316 aa8.12□□□□□ -1.11
SNX5-218ENST00000606570 MBD5Q9P267 1494 aa8.11□□□□□ -1.11
SNX5-218ENST00000606570 REC8O95072 547 aa8.11□□□□□ -1.11
SNX5-218ENST00000606570 MCM6Q14566 821 aa8.11□□□□□ -1.11
SNX5-218ENST00000606570 RBBP5Q15291 538 aaKnown RBP8.11□□□□□ -1.11
SNX5-218ENST00000606570 TDRD7Q8NHU6 1098 aaKnown RBP8.11□□□□□ -1.11
SNX5-218ENST00000606570 UHMK1Q8TAS1 419 aaKnown RBP8.11□□□□□ -1.11
SNX5-218ENST00000606570 C17orf50Q8WW18 174 aa8.11□□□□□ -1.11
SNX5-218ENST00000606570 TSR2Q969E8 191 aaKnown RBP8.11□□□□□ -1.11
SNX5-218ENST00000606570 DDX41Q9UJV9 622 aaKnown RBP8.11□□□□□ -1.11
SNX5-218ENST00000606570 DDX19BQ9UMR2 479 aa8.11□□□□□ -1.11
SNX5-218ENST00000606570 KIAA0586Q9BVV6 1533 aa8.11□□□□□ -1.11
SNX5-218ENST00000606570 IFT140Q96RY7 1462 aa8.11□□□□□ -1.11
SNX5-218ENST00000606570 CYP2C19P33261 490 aa8.11□□□□□ -1.11
SNX5-218ENST00000606570 RASA3Q14644 834 aa8.11□□□□□ -1.11
SNX5-218ENST00000606570 AKNAD1Q5T1N1 836 aa8.11□□□□□ -1.11
SNX5-218ENST00000606570 SPATS2LQ9NUQ6 558 aaKnown RBP8.11□□□□□ -1.11
SNX5-218ENST00000606570 CWC25Q9NXE8 425 aaPredicted RBP8.11□□□□□ -1.11
SNX5-218ENST00000606570 ARHGEF11O15085 1522 aa8.11□□□□□ -1.11
SNX5-218ENST00000606570 RAD50Q92878 1312 aa8.11□□□□□ -1.11
SNX5-218ENST00000606570 AP1G2O75843 785 aa8.11□□□□□ -1.11
SNX5-218ENST00000606570 CDKL5O76039 1030 aa8.11□□□□□ -1.11
SNX5-218ENST00000606570 TRAIPQ9BWF2 469 aa8.11□□□□□ -1.11
SNX5-218ENST00000606570 TMEM165Q9HC07 324 aa8.11□□□□□ -1.11
SNX5-218ENST00000606570 TMOD4Q9NZQ9 345 aa8.11□□□□□ -1.11
SNX5-218ENST00000606570 PRAG1Q86YV5 1406 aa8.11□□□□□ -1.11
SNX5-218ENST00000606570 RDXP35241 583 aaKnown RBP8.1□□□□□ -1.11
SNX5-218ENST00000606570 BLOC1S6Q9UL45 172 aa8.1□□□□□ -1.11
SNX5-218ENST00000606570 CIZ1Q9ULV3 898 aaPredicted RBP8.1□□□□□ -1.11
SNX5-218ENST00000606570 ZNF521Q96K83 1311 aa8.1□□□□□ -1.11
SNX5-218ENST00000606570 CDC37Q16543 378 aaPredicted RBP8.1□□□□□ -1.11
SNX5-218ENST00000606570 SPC24Q8NBT2 197 aa8.1□□□□□ -1.11
SNX5-218ENST00000606570 BICD1Q96G01 975 aa8.1□□□□□ -1.11
SNX5-218ENST00000606570 CCDC39Q9UFE4 941 aa8.1□□□□□ -1.11
SNX5-218ENST00000606570 CEP170Q5SW79 1584 aa8.1□□□□□ -1.11
SNX5-218ENST00000606570 CREB3O43889 395 aa8.1□□□□□ -1.11
SNX5-218ENST00000606570 TSGA10IPQ3SY00 556 aa8.1□□□□□ -1.11
SNX5-218ENST00000606570 LARP6Q9BRS8 491 aaKnown RBP8.1□□□□□ -1.11
SNX5-218ENST00000606570 KIF5CO60282 957 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms