RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 RFC4P35249 363 aa25.33■■□□□ 1.65
SRSF4-206ENST00000605204 TAF7Q15545 349 aaPredicted RBP25.33■■□□□ 1.65
SRSF4-206ENST00000605204 ATP10DQ9P241 1426 aa25.33■■□□□ 1.65
SRSF4-206ENST00000605204 ANP32CO43423 234 aa25.32■■□□□ 1.64
SRSF4-206ENST00000605204 RUNDC1Q96C34 613 aa25.32■■□□□ 1.64
SRSF4-206ENST00000605204 GIGYF1O75420 1035 aaPredicted RBP25.31■■□□□ 1.64
SRSF4-206ENST00000605204 INTS5Q6P9B9 1019 aaKnown RBP25.31■■□□□ 1.64
SRSF4-206ENST00000605204 ADCY9O60503 1353 aa25.31■■□□□ 1.64
SRSF4-206ENST00000605204 DCTN1Q14203 1278 aa25.31■■□□□ 1.64
SRSF4-206ENST00000605204 NLGN1Q8N2Q7 840 aa25.31■■□□□ 1.64
SRSF4-206ENST00000605204 ARHGEF1Q92888 912 aaKnown RBP25.31■■□□□ 1.64
SRSF4-206ENST00000605204 KIF13BQ9NQT8 1826 aa25.3■■□□□ 1.64
SRSF4-206ENST00000605204 C4AP0C0L4 1744 aa25.3■■□□□ 1.64
SRSF4-206ENST00000605204 CD2APQ9Y5K6 639 aa25.3■■□□□ 1.64
SRSF4-206ENST00000605204 SOS1Q07889 1333 aaPredicted RBP25.29■■□□□ 1.64
SRSF4-206ENST00000605204 TMPOP42166 694 aaKnown RBP25.29■■□□□ 1.64
SRSF4-206ENST00000605204 GRIN3BO60391 1043 aa25.28■■□□□ 1.64
SRSF4-206ENST00000605204 RIPK4P57078 832 aa25.28■■□□□ 1.64
SRSF4-206ENST00000605204 WWC3Q9ULE0 1092 aa25.28■■□□□ 1.64
SRSF4-206ENST00000605204 ADAMTS8Q9UP79 889 aa25.28■■□□□ 1.64
SRSF4-206ENST00000605204 USP42Q9H9J4 1324 aaKnown RBP25.26■■□□□ 1.63
SRSF4-206ENST00000605204 SNRPA1P09661 255 aaKnown RBP25.26■■□□□ 1.63
SRSF4-206ENST00000605204 BABAM1Q9NWV8 329 aa25.26■■□□□ 1.63
SRSF4-206ENST00000605204 ZBTB1Q9Y2K1 713 aa25.25■■□□□ 1.63
SRSF4-206ENST00000605204 COL15A1P39059 1388 aa25.24■■□□□ 1.63
SRSF4-206ENST00000605204 N4BP2Q86UW6 1770 aaPredicted RBP25.24■■□□□ 1.63
SRSF4-206ENST00000605204 MYH14Q7Z406 1995 aaKnown RBP25.24■■□□□ 1.63
SRSF4-206ENST00000605204 GYS1P13807 737 aa25.24■■□□□ 1.63
SRSF4-206ENST00000605204 A0A087WZG4 1122 aa25.23■■□□□ 1.63
SRSF4-206ENST00000605204 CCDC146Q8IYE0 955 aa25.23■■□□□ 1.63
SRSF4-206ENST00000605204 PXDNLA1KZ92 1463 aa25.22■■□□□ 1.63
SRSF4-206ENST00000605204 DLG5Q8TDM6 1919 aa25.22■■□□□ 1.63
SRSF4-206ENST00000605204 KCNQ3O43525 872 aa25.22■■□□□ 1.63
SRSF4-206ENST00000605204 ZPR1O75312 459 aa25.22■■□□□ 1.63
SRSF4-206ENST00000605204 MMP10P09238 476 aa25.21■■□□□ 1.63
SRSF4-206ENST00000605204 IL6STP40189 918 aaPredicted RBP25.21■■□□□ 1.63
SRSF4-206ENST00000605204 NPM2Q86SE8 214 aaKnown RBP25.21■■□□□ 1.63
SRSF4-206ENST00000605204 EIF5P55010 431 aaKnown RBP25.2■■□□□ 1.63
SRSF4-206ENST00000605204 NARFQ9UHQ1 456 aa25.2■■□□□ 1.63
SRSF4-206ENST00000605204 BRCA1P38398 1863 aaKnown RBP25.2■■□□□ 1.63
SRSF4-206ENST00000605204 CANXP27824 592 aaKnown RBP25.19■■□□□ 1.62
SRSF4-206ENST00000605204 THUMPD2Q9BTF0 503 aaKnown RBP25.19■■□□□ 1.62
SRSF4-206ENST00000605204 C10orf71Q711Q0 1435 aa25.19■■□□□ 1.62
SRSF4-206ENST00000605204 MRS2Q9HD23 443 aa25.17■■□□□ 1.62
SRSF4-206ENST00000605204 TSPYL4Q9UJ04 414 aa25.17■■□□□ 1.62
SRSF4-206ENST00000605204 RRP7AQ9Y3A4 280 aaKnown RBP25.17■■□□□ 1.62
SRSF4-206ENST00000605204 PARP3Q9Y6F1 533 aa25.17■■□□□ 1.62
SRSF4-206ENST00000605204 KDM3BQ7LBC6 1761 aa25.16■■□□□ 1.62
SRSF4-206ENST00000605204 EIF4A1P60842 406 aaKnown RBP25.16■■□□□ 1.62
SRSF4-206ENST00000605204 MIS18AQ9NYP9 233 aa25.16■■□□□ 1.62
SRSF4-206ENST00000605204 SRP68Q9UHB9 627 aaKnown RBP25.16■■□□□ 1.62
SRSF4-206ENST00000605204 CALD1Q05682 793 aaKnown RBP25.15■■□□□ 1.62
SRSF4-206ENST00000605204 NEUROD2Q15784 382 aa25.15■■□□□ 1.62
SRSF4-206ENST00000605204 ZNF526Q8TF50 670 aaPredicted RBP25.15■■□□□ 1.62
SRSF4-206ENST00000605204 USP16Q9Y5T5 823 aa25.15■■□□□ 1.62
SRSF4-206ENST00000605204 FKBP8Q14318 412 aa25.14■■□□□ 1.61
SRSF4-206ENST00000605204 USPL1Q5W0Q7 1092 aa25.14■■□□□ 1.61
SRSF4-206ENST00000605204 TRIM35Q9UPQ4 493 aa25.14■■□□□ 1.61
SRSF4-206ENST00000605204 A1BGP04217 495 aa25.13■■□□□ 1.61
SRSF4-206ENST00000605204 RGL2O15211 777 aa25.12■■□□□ 1.61
SRSF4-206ENST00000605204 APAF1O14727 1248 aa25.11■■□□□ 1.61
SRSF4-206ENST00000605204 ERBB4Q15303 1308 aa25.11■■□□□ 1.61
SRSF4-206ENST00000605204 LAMB4A4D0S4 1761 aa25.1■■□□□ 1.61
SRSF4-206ENST00000605204 CCDC184Q52MB2 194 aa25.1■■□□□ 1.61
SRSF4-206ENST00000605204 GPBP1L1Q9HC44 474 aaPredicted RBP25.1■■□□□ 1.61
SRSF4-206ENST00000605204 ZNF330Q9Y3S2 320 aaPredicted RBP25.1■■□□□ 1.61
SRSF4-206ENST00000605204 PRAMEF22A3QJZ6 481 aa25.09■■□□□ 1.61
SRSF4-206ENST00000605204 CHL1O00533 1208 aa25.09■■□□□ 1.61
SRSF4-206ENST00000605204 TM4SF1P30408 202 aa25.09■■□□□ 1.61
SRSF4-206ENST00000605204 NCBP3Q53F19 620 aaKnown RBP25.09■■□□□ 1.61
SRSF4-206ENST00000605204 TGFB2P61812 414 aa25.08■■□□□ 1.61
SRSF4-206ENST00000605204 SCN7AQ01118 1682 aa25.08■■□□□ 1.61
SRSF4-206ENST00000605204 DZIP3Q86Y13 1208 aaKnown RBP25.07■■□□□ 1.6
SRSF4-206ENST00000605204 BCL2L12Q9HB09 334 aa25.07■■□□□ 1.6
SRSF4-206ENST00000605204 ZNF652Q9Y2D9 606 aa25.07■■□□□ 1.6
SRSF4-206ENST00000605204 POLRMTO00411 1230 aaKnown RBP25.06■■□□□ 1.6
SRSF4-206ENST00000605204 DDR1Q08345 913 aa25.06■■□□□ 1.6
SRSF4-206ENST00000605204 NFIXQ14938 502 aa25.06■■□□□ 1.6
SRSF4-206ENST00000605204 CFAP44Q96MT7 982 aa25.06■■□□□ 1.6
SRSF4-206ENST00000605204 ARFGEF1Q9Y6D6 1849 aa25.06■■□□□ 1.6
SRSF4-206ENST00000605204 CLEC4GQ6UXB4 293 aa25.05■■□□□ 1.6
SRSF4-206ENST00000605204 CAMTA2O94983 1202 aa25.05■■□□□ 1.6
SRSF4-206ENST00000605204 CCDC27Q2M243 656 aa25.05■■□□□ 1.6
SRSF4-206ENST00000605204 TBC1D2BQ9UPU7 963 aa25.05■■□□□ 1.6
SRSF4-206ENST00000605204 NBPF26B4DH59 902 aa25.04■■□□□ 1.6
SRSF4-206ENST00000605204 HOXB7P09629 217 aa25.04■■□□□ 1.6
SRSF4-206ENST00000605204 NBPF10Q6P3W6 841 aaKnown RBP25.04■■□□□ 1.6
SRSF4-206ENST00000605204 NBPF15Q8N660 670 aa25.04■■□□□ 1.6
SRSF4-206ENST00000605204 IFT57Q9NWB7 429 aa25.04■■□□□ 1.6
SRSF4-206ENST00000605204 CARMIL3Q8ND23 1372 aa25.03■■□□□ 1.6
SRSF4-206ENST00000605204 GNAI1P63096 354 aa25.02■■□□□ 1.6
SRSF4-206ENST00000605204 LAS1LQ9Y4W2 734 aaKnown RBP25.02■■□□□ 1.6
SRSF4-206ENST00000605204 A0A0G2JLW4 131 aa25.01■■□□□ 1.59
SRSF4-206ENST00000605204 KIF3CO14782 793 aa25■■□□□ 1.59
SRSF4-206ENST00000605204 NGEFQ8N5V2 710 aa25■■□□□ 1.59
SRSF4-206ENST00000605204 SERPINB2P05120 415 aa24.99■■□□□ 1.59
SRSF4-206ENST00000605204 ZNF853P0CG23 659 aa24.99■■□□□ 1.59
SRSF4-206ENST00000605204 DPEP1P16444 411 aa24.99■■□□□ 1.59
SRSF4-206ENST00000605204 PIP4K2AP48426 406 aaPredicted RBP24.99■■□□□ 1.59
SRSF4-206ENST00000605204 SETDB2Q96T68 719 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms