RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 TTC39BQ5VTQ0 682 aaPredicted RBP6.22□□□□□ -1.41
SPTBN1-206ENST00000602898 PPP4R2Q9NY27 417 aa6.22□□□□□ -1.41
SPTBN1-206ENST00000602898 KIAA1468Q9P260 1216 aa6.22□□□□□ -1.41
SPTBN1-206ENST00000602898 TTF2Q9UNY4 1162 aaKnown RBP6.22□□□□□ -1.41
SPTBN1-206ENST00000602898 PTPREP23469 700 aa6.22□□□□□ -1.41
SPTBN1-206ENST00000602898 TNNT2P45379 298 aaPredicted RBP6.22□□□□□ -1.41
SPTBN1-206ENST00000602898 SLC20A2Q08357 652 aa6.22□□□□□ -1.41
SPTBN1-206ENST00000602898 CBLBQ13191 982 aa6.22□□□□□ -1.41
SPTBN1-206ENST00000602898 SH3D19Q5HYK7 790 aa6.22□□□□□ -1.41
SPTBN1-206ENST00000602898 WDR75Q8IWA0 830 aaKnown RBP6.22□□□□□ -1.41
SPTBN1-206ENST00000602898 DCAF11Q8TEB1 546 aa6.22□□□□□ -1.41
SPTBN1-206ENST00000602898 PAGR1Q9BTK6 254 aa6.22□□□□□ -1.41
SPTBN1-206ENST00000602898 BCL2L12Q9HB09 334 aa6.22□□□□□ -1.41
SPTBN1-206ENST00000602898 SPC25Q9HBM1 224 aa6.22□□□□□ -1.41
SPTBN1-206ENST00000602898 MROH2AA6NES4 1674 aa6.21□□□□□ -1.41
SPTBN1-206ENST00000602898 MADDQ8WXG6 1647 aa6.21□□□□□ -1.41
SPTBN1-206ENST00000602898 PUS10Q3MIT2 529 aaKnown RBP6.21□□□□□ -1.42
SPTBN1-206ENST00000602898 GPCPD1Q9NPB8 672 aa6.21□□□□□ -1.42
SPTBN1-206ENST00000602898 ZHX1Q9UKY1 873 aaPredicted RBP6.21□□□□□ -1.42
SPTBN1-206ENST00000602898 ZNF142P52746 1687 aaPredicted RBP6.21□□□□□ -1.42
SPTBN1-206ENST00000602898 MAGI2Q86UL8 1455 aa6.21□□□□□ -1.42
SPTBN1-206ENST00000602898 GOLIM4O00461 696 aa6.21□□□□□ -1.42
SPTBN1-206ENST00000602898 RRM1P23921 792 aa6.21□□□□□ -1.42
SPTBN1-206ENST00000602898 DHX8Q14562 1220 aaKnown RBP6.21□□□□□ -1.42
SPTBN1-206ENST00000602898 ICE2Q659A1 982 aa6.21□□□□□ -1.42
SPTBN1-206ENST00000602898 OTUD6BQ8N6M0 293 aa6.21□□□□□ -1.42
SPTBN1-206ENST00000602898 CERKQ8TCT0 537 aa6.21□□□□□ -1.42
SPTBN1-206ENST00000602898 STK32AQ8WU08 396 aa6.21□□□□□ -1.42
SPTBN1-206ENST00000602898 FAM161BQ96MY7 647 aa6.21□□□□□ -1.42
SPTBN1-206ENST00000602898 TCEAL9Q9UHQ7 104 aa6.21□□□□□ -1.42
SPTBN1-206ENST00000602898 MED1Q15648 1581 aaPredicted RBP6.21□□□□□ -1.42
SPTBN1-206ENST00000602898 LMNB1P20700 586 aa6.2□□□□□ -1.42
SPTBN1-206ENST00000602898 CALRP27797 417 aaKnown RBP6.2□□□□□ -1.42
SPTBN1-206ENST00000602898 SYCP2LQ5T4T6 812 aa6.2□□□□□ -1.42
SPTBN1-206ENST00000602898 MTERF4Q7Z6M4 381 aaKnown RBP6.2□□□□□ -1.42
SPTBN1-206ENST00000602898 PPP1R12CQ9BZL4 782 aa6.2□□□□□ -1.42
SPTBN1-206ENST00000602898 ANO2Q9NQ90 1003 aa6.2□□□□□ -1.42
SPTBN1-206ENST00000602898 DDX56Q9NY93 547 aaKnown RBP6.2□□□□□ -1.42
SPTBN1-206ENST00000602898 BIN2Q9UBW5 565 aaPredicted RBP6.2□□□□□ -1.42
SPTBN1-206ENST00000602898 PALM3A6NDB9 673 aaPredicted RBP6.2□□□□□ -1.42
SPTBN1-206ENST00000602898 LONRF1Q17RB8 773 aa6.2□□□□□ -1.42
SPTBN1-206ENST00000602898 NT5DC4Q86YG4 428 aa6.2□□□□□ -1.42
SPTBN1-206ENST00000602898 TRIM44Q96DX7 344 aaPredicted RBP6.2□□□□□ -1.42
SPTBN1-206ENST00000602898 TINF2Q9BSI4 451 aa6.2□□□□□ -1.42
SPTBN1-206ENST00000602898 TRIM34Q9BYJ4 488 aa6.2□□□□□ -1.42
SPTBN1-206ENST00000602898 DISP3Q9P2K9 1392 aa6.2□□□□□ -1.42
SPTBN1-206ENST00000602898 LDHAP00338 332 aaKnown RBP6.19□□□□□ -1.42
SPTBN1-206ENST00000602898 NBPF20Q3BBV1 942 aa6.19□□□□□ -1.42
SPTBN1-206ENST00000602898 CC2D1AQ6P1N0 951 aaPredicted RBP6.19□□□□□ -1.42
SPTBN1-206ENST00000602898 CEP120Q8N960 986 aa6.19□□□□□ -1.42
SPTBN1-206ENST00000602898 PNISRQ8TF01 805 aaKnown RBP6.19□□□□□ -1.42
SPTBN1-206ENST00000602898 ISY1Q9ULR0 285 aaKnown RBP6.19□□□□□ -1.42
SPTBN1-206ENST00000602898 GIGYF1O75420 1035 aaPredicted RBP6.19□□□□□ -1.42
SPTBN1-206ENST00000602898 FAM163BP0C2L3 166 aa6.19□□□□□ -1.42
SPTBN1-206ENST00000602898 NDUFV2P19404 249 aa6.19□□□□□ -1.42
SPTBN1-206ENST00000602898 FAM69CQ0P6D2 419 aa6.19□□□□□ -1.42
SPTBN1-206ENST00000602898 ODR4Q5SWX8 454 aa6.19□□□□□ -1.42
SPTBN1-206ENST00000602898 CCAR1Q8IX12 1150 aaKnown RBP6.19□□□□□ -1.42
SPTBN1-206ENST00000602898 NGDNQ8NEJ9 315 aaKnown RBP6.19□□□□□ -1.42
SPTBN1-206ENST00000602898 HS3ST6Q96QI5 342 aa6.19□□□□□ -1.42
SPTBN1-206ENST00000602898 FAM217BQ9NTX9 383 aaPredicted RBP6.19□□□□□ -1.42
SPTBN1-206ENST00000602898 SWAP70Q9UH65 585 aa6.19□□□□□ -1.42
SPTBN1-206ENST00000602898 THRAP3Q9Y2W1 955 aaKnown RBP6.19□□□□□ -1.42
SPTBN1-206ENST00000602898 RIMS1Q86UR5 1692 aaKnown RBP6.19□□□□□ -1.42
SPTBN1-206ENST00000602898 EEA1Q15075 1411 aa6.19□□□□□ -1.42
SPTBN1-206ENST00000602898 C10orf62Q5T681 223 aaPredicted RBP6.19□□□□□ -1.42
SPTBN1-206ENST00000602898 TATDN2Q93075 761 aa6.19□□□□□ -1.42
SPTBN1-206ENST00000602898 NUB1Q9Y5A7 615 aa6.19□□□□□ -1.42
SPTBN1-206ENST00000602898 FRMPD1Q5SYB0 1578 aa6.18□□□□□ -1.42
SPTBN1-206ENST00000602898 ASXL2Q76L83 1435 aa6.18□□□□□ -1.42
SPTBN1-206ENST00000602898 LETM1O95202 739 aaPredicted RBP6.18□□□□□ -1.42
SPTBN1-206ENST00000602898 COPB2P35606 906 aa6.18□□□□□ -1.42
SPTBN1-206ENST00000602898 QPCTQ16769 361 aa6.18□□□□□ -1.42
SPTBN1-206ENST00000602898 L1TD1Q5T7N2 865 aaKnown RBP6.18□□□□□ -1.42
SPTBN1-206ENST00000602898 KANK3Q6NY19 840 aa6.18□□□□□ -1.42
SPTBN1-206ENST00000602898 ZCRB1Q8TBF4 217 aaKnown RBP6.18□□□□□ -1.42
SPTBN1-206ENST00000602898 SCYL1Q96KG9 808 aa6.18□□□□□ -1.42
SPTBN1-206ENST00000602898 GTPBP4Q9BZE4 634 aaKnown RBP6.18□□□□□ -1.42
SPTBN1-206ENST00000602898 YY1AP1Q9H869 796 aa6.18□□□□□ -1.42
SPTBN1-206ENST00000602898 LIMD1Q9UGP4 676 aa6.18□□□□□ -1.42
SPTBN1-206ENST00000602898 RICTORQ6R327 1708 aa6.18□□□□□ -1.42
SPTBN1-206ENST00000602898 EFCAB5A4FU69 1503 aa6.18□□□□□ -1.42
SPTBN1-206ENST00000602898 PRC1O43663 620 aa6.18□□□□□ -1.42
SPTBN1-206ENST00000602898 DNTTIP2Q5QJE6 756 aaKnown RBP6.18□□□□□ -1.42
SPTBN1-206ENST00000602898 PPP1R18Q6NYC8 613 aa6.18□□□□□ -1.42
SPTBN1-206ENST00000602898 UCN2Q96RP3 112 aa6.18□□□□□ -1.42
SPTBN1-206ENST00000602898 EYA1Q99502 592 aa6.18□□□□□ -1.42
SPTBN1-206ENST00000602898 ARPC5LQ9BPX5 153 aa6.18□□□□□ -1.42
SPTBN1-206ENST00000602898 UGGT2Q9NYU1 1516 aa6.17□□□□□ -1.42
SPTBN1-206ENST00000602898 ARHGEF12Q9NZN5 1544 aa6.17□□□□□ -1.42
SPTBN1-206ENST00000602898 TRIM6-TRIM34B2RNG4 842 aa6.17□□□□□ -1.42
SPTBN1-206ENST00000602898 PPP1R3GB7ZBB8 358 aa6.17□□□□□ -1.42
SPTBN1-206ENST00000602898 SLFNL1Q499Z3 407 aa6.17□□□□□ -1.42
SPTBN1-206ENST00000602898 SYMPKQ92797 1274 aaKnown RBP6.17□□□□□ -1.42
SPTBN1-206ENST00000602898 SENP7Q9BQF6 1050 aa6.17□□□□□ -1.42
SPTBN1-206ENST00000602898 IER2Q9BTL4 223 aa6.17□□□□□ -1.42
SPTBN1-206ENST00000602898 ZBED2Q9BTP6 218 aa6.17□□□□□ -1.42
SPTBN1-206ENST00000602898 CENPOQ9BU64 300 aa6.17□□□□□ -1.42
SPTBN1-206ENST00000602898 CARD10Q9BWT7 1032 aa6.17□□□□□ -1.42
SPTBN1-206ENST00000602898 CAPN10Q9HC96 672 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms