RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 SYCE3A1L190 88 aa18.62■□□□□ 0.57
PPFIA3-206ENST00000602655 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.62■□□□□ 0.57
PPFIA3-206ENST00000602655 C17orf53Q8N3J3 647 aaPredicted RBP18.62■□□□□ 0.57
PPFIA3-206ENST00000602655 NFATC2IPQ8NCF5 419 aa18.62■□□□□ 0.57
PPFIA3-206ENST00000602655 MYRIPQ8NFW9 859 aa18.62■□□□□ 0.57
PPFIA3-206ENST00000602655 NPHP3Q7Z494 1330 aa18.62■□□□□ 0.57
PPFIA3-206ENST00000602655 RBM42Q9BTD8 480 aaKnown RBP18.61■□□□□ 0.57
PPFIA3-206ENST00000602655 SETD1AO15047 1707 aaKnown RBP18.61■□□□□ 0.57
PPFIA3-206ENST00000602655 CHL1O00533 1208 aa18.61■□□□□ 0.57
PPFIA3-206ENST00000602655 SMARCA5O60264 1052 aaPredicted RBP18.61■□□□□ 0.57
PPFIA3-206ENST00000602655 HMGN5P82970 282 aaKnown RBP18.61■□□□□ 0.57
PPFIA3-206ENST00000602655 TAF7Q15545 349 aaPredicted RBP18.61■□□□□ 0.57
PPFIA3-206ENST00000602655 MEIS3Q99687 375 aa18.61■□□□□ 0.57
PPFIA3-206ENST00000602655 IGSF1Q8N6C5 1336 aa18.61■□□□□ 0.57
PPFIA3-206ENST00000602655 SHPRHQ149N8 1683 aa18.6■□□□□ 0.57
PPFIA3-206ENST00000602655 CHAF1AQ13111 956 aaPredicted RBP18.6■□□□□ 0.57
PPFIA3-206ENST00000602655 TAF3Q5VWG9 929 aa18.6■□□□□ 0.57
PPFIA3-206ENST00000602655 KIAA0232Q92628 1395 aa18.6■□□□□ 0.57
PPFIA3-206ENST00000602655 PIK3R4Q99570 1358 aa18.59■□□□□ 0.57
PPFIA3-206ENST00000602655 SMC5Q8IY18 1101 aa18.59■□□□□ 0.57
PPFIA3-206ENST00000602655 CDK12Q9NYV4 1490 aaPredicted RBP18.59■□□□□ 0.57
PPFIA3-206ENST00000602655 FOXD4L6Q3SYB3 417 aaPredicted RBP18.58■□□□□ 0.57
PPFIA3-206ENST00000602655 FOXD4L3Q6VB84 417 aaPredicted RBP18.58■□□□□ 0.57
PPFIA3-206ENST00000602655 IQSEC2Q5JU85 1478 aa18.58■□□□□ 0.57
PPFIA3-206ENST00000602655 TATP17735 454 aaPredicted RBP18.58■□□□□ 0.56
PPFIA3-206ENST00000602655 TSHZ3Q63HK5 1081 aa18.58■□□□□ 0.56
PPFIA3-206ENST00000602655 ERICH4A6NGS2 130 aa18.58■□□□□ 0.56
PPFIA3-206ENST00000602655 MCM5P33992 734 aa18.58■□□□□ 0.56
PPFIA3-206ENST00000602655 C1orf167Q5SNV9 1468 aa18.58■□□□□ 0.56
PPFIA3-206ENST00000602655 CHPF2Q9P2E5 772 aa18.57■□□□□ 0.56
PPFIA3-206ENST00000602655 K7ELQ4 463 aaPredicted RBP18.57■□□□□ 0.56
PPFIA3-206ENST00000602655 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.57■□□□□ 0.56
PPFIA3-206ENST00000602655 IL16Q14005 1332 aa18.57■□□□□ 0.56
PPFIA3-206ENST00000602655 ZNF853P0CG23 659 aa18.57■□□□□ 0.56
PPFIA3-206ENST00000602655 C16orf71Q8IYS4 520 aaPredicted RBP18.57■□□□□ 0.56
PPFIA3-206ENST00000602655 ZNF710Q8N1W2 664 aa18.57■□□□□ 0.56
PPFIA3-206ENST00000602655 USP31Q70CQ4 1352 aa18.56■□□□□ 0.56
PPFIA3-206ENST00000602655 EXOC6BQ9Y2D4 811 aa18.55■□□□□ 0.56
PPFIA3-206ENST00000602655 LARP1Q6PKG0 1096 aaKnown RBP18.55■□□□□ 0.56
PPFIA3-206ENST00000602655 API5Q9BZZ5 524 aaKnown RBP18.55■□□□□ 0.56
PPFIA3-206ENST00000602655 CD2BP2O95400 341 aaKnown RBP18.54■□□□□ 0.56
PPFIA3-206ENST00000602655 FLIIQ13045 1269 aa18.54■□□□□ 0.56
PPFIA3-206ENST00000602655 TTC12Q9H892 705 aaPredicted RBP18.54■□□□□ 0.56
PPFIA3-206ENST00000602655 BCL2L12Q9HB09 334 aa18.54■□□□□ 0.56
PPFIA3-206ENST00000602655 GOLGB1Q14789 3259 aaKnown RBP18.54■□□□□ 0.56
PPFIA3-206ENST00000602655 BTG4Q9NY30 223 aa18.54■□□□□ 0.56
PPFIA3-206ENST00000602655 SSH2Q76I76 1423 aa18.54■□□□□ 0.56
PPFIA3-206ENST00000602655 NOLC1Q14978 699 aaKnown RBP eCLIP18.53■□□□□ 0.56
PPFIA3-206ENST00000602655 ZNF445P59923 1031 aa18.53■□□□□ 0.56
PPFIA3-206ENST00000602655 PROSER3Q2NL68 480 aa18.53■□□□□ 0.56
PPFIA3-206ENST00000602655 PRIMPOLQ96LW4 560 aa18.53■□□□□ 0.56
PPFIA3-206ENST00000602655 TNNT3P45378 269 aaPredicted RBP18.53■□□□□ 0.56
PPFIA3-206ENST00000602655 ALDH1L2Q3SY69 923 aa18.53■□□□□ 0.56
PPFIA3-206ENST00000602655 ZBTB40Q9NUA8 1239 aa18.53■□□□□ 0.56
PPFIA3-206ENST00000602655 PI4KAP2A4QPH2 592 aa18.52■□□□□ 0.56
PPFIA3-206ENST00000602655 PI4KAP1Q8N8J0 262 aa18.52■□□□□ 0.56
PPFIA3-206ENST00000602655 CHAMP1Q96JM3 812 aa18.52■□□□□ 0.56
PPFIA3-206ENST00000602655 CCDC30Q5VVM6 783 aa18.52■□□□□ 0.55
PPFIA3-206ENST00000602655 ERBB3P21860 1342 aa18.51■□□□□ 0.55
PPFIA3-206ENST00000602655 ZBTB7BO15156 539 aaPredicted RBP18.51■□□□□ 0.55
PPFIA3-206ENST00000602655 MAP3K5Q99683 1374 aa18.51■□□□□ 0.55
PPFIA3-206ENST00000602655 TTC5Q8N0Z6 440 aa18.51■□□□□ 0.55
PPFIA3-206ENST00000602655 ZBTB9Q96C00 473 aa18.51■□□□□ 0.55
PPFIA3-206ENST00000602655 PDLIM2Q96JY6 352 aa18.51■□□□□ 0.55
PPFIA3-206ENST00000602655 OTUD7AQ8TE49 926 aaPredicted RBP18.5■□□□□ 0.55
PPFIA3-206ENST00000602655 SNX21Q969T3 373 aa18.5■□□□□ 0.55
PPFIA3-206ENST00000602655 KIF20BQ96Q89 1820 aa18.5■□□□□ 0.55
PPFIA3-206ENST00000602655 RNMTO43148 476 aaKnown RBP18.5■□□□□ 0.55
PPFIA3-206ENST00000602655 CABP4P57796 275 aa18.5■□□□□ 0.55
PPFIA3-206ENST00000602655 ANKARQ7Z5J8 1434 aa18.5■□□□□ 0.55
PPFIA3-206ENST00000602655 USP32Q8NFA0 1604 aa18.5■□□□□ 0.55
PPFIA3-206ENST00000602655 IRX5P78411 483 aaPredicted RBP18.5■□□□□ 0.55
PPFIA3-206ENST00000602655 IRX3P78415 501 aaPredicted RBP18.5■□□□□ 0.55
PPFIA3-206ENST00000602655 IL1RAPL2Q9NP60 686 aa18.49■□□□□ 0.55
PPFIA3-206ENST00000602655 CCDC66A2RUB6 948 aa18.49■□□□□ 0.55
PPFIA3-206ENST00000602655 ZFP91Q96JP5 570 aaPredicted RBP18.49■□□□□ 0.55
PPFIA3-206ENST00000602655 CT47B1P0C2W7 299 aaPredicted RBP18.48■□□□□ 0.55
PPFIA3-206ENST00000602655 ITSN1Q15811 1721 aa18.48■□□□□ 0.55
PPFIA3-206ENST00000602655 ADAMTSL3P82987 1691 aa18.48■□□□□ 0.55
PPFIA3-206ENST00000602655 OS9Q13438 667 aaPredicted RBP18.48■□□□□ 0.55
PPFIA3-206ENST00000602655 CWF19L2Q2TBE0 894 aaKnown RBP18.48■□□□□ 0.55
PPFIA3-206ENST00000602655 ARHGEF10O15013 1369 aa18.48■□□□□ 0.55
PPFIA3-206ENST00000602655 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.48■□□□□ 0.55
PPFIA3-206ENST00000602655 NUCB2P80303 420 aa18.48■□□□□ 0.55
PPFIA3-206ENST00000602655 CCDC85AQ96PX6 553 aaPredicted RBP18.48■□□□□ 0.55
PPFIA3-206ENST00000602655 LMTK3Q96Q04 1460 aa18.47■□□□□ 0.55
PPFIA3-206ENST00000602655 TRIM6-TRIM34B2RNG4 842 aa18.47■□□□□ 0.55
PPFIA3-206ENST00000602655 AKAP4Q5JQC9 854 aa18.47■□□□□ 0.55
PPFIA3-206ENST00000602655 FAM182BQ5T319 152 aa18.47■□□□□ 0.55
PPFIA3-206ENST00000602655 TRIM34Q9BYJ4 488 aa18.47■□□□□ 0.55
PPFIA3-206ENST00000602655 CHMP3Q9Y3E7 222 aa18.47■□□□□ 0.55
PPFIA3-206ENST00000602655 SPATA31A3Q5VYP0 1347 aa18.47■□□□□ 0.55
PPFIA3-206ENST00000602655 ATP5J2-PTCD1G3V325 749 aa18.46■□□□□ 0.55
PPFIA3-206ENST00000602655 MAP4K4O95819 1239 aaPredicted RBP18.46■□□□□ 0.55
PPFIA3-206ENST00000602655 PKP1Q13835 747 aa18.46■□□□□ 0.55
PPFIA3-206ENST00000602655 LRSAM1Q6UWE0 723 aa18.46■□□□□ 0.55
PPFIA3-206ENST00000602655 SIRT2Q8IXJ6 389 aa18.46■□□□□ 0.55
PPFIA3-206ENST00000602655 LRRFIP2Q9Y608 721 aaKnown RBP18.46■□□□□ 0.55
PPFIA3-206ENST00000602655 ACSBG1Q96GR2 724 aa18.46■□□□□ 0.55
PPFIA3-206ENST00000602655 LMBRD1Q9NUN5 540 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms