RNA–Protein interactions for RNA: ENST00000602498.1

HCG18-243, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 327 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-243ENST00000602498 C4BP0C0L5 1744 aa7.53□□□□□ -1.2
HCG18-243ENST00000602498 GRIN3BO60391 1043 aa7.53□□□□□ -1.2
HCG18-243ENST00000602498 STARD3NLO95772 234 aa7.53□□□□□ -1.2
HCG18-243ENST00000602498 HOXD11P31277 338 aaPredicted RBP7.53□□□□□ -1.2
HCG18-243ENST00000602498 NFIXQ14938 502 aa7.53□□□□□ -1.2
HCG18-243ENST00000602498 NEUROD2Q15784 382 aa7.53□□□□□ -1.2
HCG18-243ENST00000602498 NGEFQ8N5V2 710 aa7.53□□□□□ -1.2
HCG18-243ENST00000602498 FMNL2Q96PY5 1086 aa7.53□□□□□ -1.2
HCG18-243ENST00000602498 USP16Q9Y5T5 823 aa7.53□□□□□ -1.2
HCG18-243ENST00000602498 MAP2P11137 1827 aaKnown RBP7.52□□□□□ -1.2
HCG18-243ENST00000602498 COL15A1P39059 1388 aa7.52□□□□□ -1.21
HCG18-243ENST00000602498 HEG1Q9ULI3 1381 aa7.52□□□□□ -1.21
HCG18-243ENST00000602498 FAM177BA6PVY3 158 aa7.52□□□□□ -1.21
HCG18-243ENST00000602498 POLRMTO00411 1230 aaKnown RBP7.52□□□□□ -1.21
HCG18-243ENST00000602498 NEFMP07197 916 aa7.52□□□□□ -1.21
HCG18-243ENST00000602498 ARHGAP27Q6ZUM4 889 aa7.52□□□□□ -1.21
HCG18-243ENST00000602498 PLEKHF1Q96S99 279 aa7.52□□□□□ -1.21
HCG18-243ENST00000602498 ZNF219Q9P2Y4 722 aaPredicted RBP7.52□□□□□ -1.21
HCG18-243ENST00000602498 SERPINB2P05120 415 aa7.51□□□□□ -1.21
HCG18-243ENST00000602498 EIF5P55010 431 aaKnown RBP7.51□□□□□ -1.21
HCG18-243ENST00000602498 NFE2L2Q16236 605 aa7.51□□□□□ -1.21
HCG18-243ENST00000602498 TBC1D9BQ66K14 1250 aa7.51□□□□□ -1.21
HCG18-243ENST00000602498 VSIG10Q8N0Z9 540 aa7.51□□□□□ -1.21
HCG18-243ENST00000602498 NARFQ9UHQ1 456 aa7.51□□□□□ -1.21
HCG18-243ENST00000602498 MAPK8IP3Q9UPT6 1336 aa7.51□□□□□ -1.21
HCG18-243ENST00000602498 LY75O60449 1722 aa7.5□□□□□ -1.21
HCG18-243ENST00000602498 CEMIPQ8WUJ3 1361 aa7.5□□□□□ -1.21
HCG18-243ENST00000602498 NPHP1O15259 732 aa7.5□□□□□ -1.21
HCG18-243ENST00000602498 TM4SF1P30408 202 aa7.5□□□□□ -1.21
HCG18-243ENST00000602498 RIPK4P57078 832 aa7.5□□□□□ -1.21
HCG18-243ENST00000602498 TGFB2P61812 414 aa7.5□□□□□ -1.21
HCG18-243ENST00000602498 RALBP1Q15311 655 aa7.5□□□□□ -1.21
HCG18-243ENST00000602498 TAF7Q15545 349 aaPredicted RBP7.5□□□□□ -1.21
HCG18-243ENST00000602498 NPM2Q86SE8 214 aaKnown RBP7.5□□□□□ -1.21
HCG18-243ENST00000602498 ZNF428Q96B54 188 aa7.5□□□□□ -1.21
HCG18-243ENST00000602498 LAS1LQ9Y4W2 734 aaKnown RBP7.5□□□□□ -1.21
HCG18-243ENST00000602498 KCPQ6ZWJ8 1503 aa7.5□□□□□ -1.21
HCG18-243ENST00000602498 C5P01031 1676 aa7.5□□□□□ -1.21
HCG18-243ENST00000602498 PXDNLA1KZ92 1463 aa7.49□□□□□ -1.21
HCG18-243ENST00000602498 MRC1P22897 1456 aa7.49□□□□□ -1.21
HCG18-243ENST00000602498 CICQ96RK0 1608 aaPredicted RBP7.49□□□□□ -1.21
HCG18-243ENST00000602498 NBPF26B4DH59 902 aa7.49□□□□□ -1.21
HCG18-243ENST00000602498 SNRPA1P09661 255 aaKnown RBP7.49□□□□□ -1.21
HCG18-243ENST00000602498 KCNA3P22001 575 aa7.49□□□□□ -1.21
HCG18-243ENST00000602498 DALRD3Q5D0E6 543 aaKnown RBP7.49□□□□□ -1.21
HCG18-243ENST00000602498 NBPF10Q6P3W6 841 aaKnown RBP7.49□□□□□ -1.21
HCG18-243ENST00000602498 DZIP3Q86Y13 1208 aaKnown RBP7.49□□□□□ -1.21
HCG18-243ENST00000602498 NBPF15Q8N660 670 aa7.49□□□□□ -1.21
HCG18-243ENST00000602498 NECTIN2Q92692 538 aa7.49□□□□□ -1.21
HCG18-243ENST00000602498 C10orf71Q711Q0 1435 aa7.49□□□□□ -1.21
HCG18-243ENST00000602498 MYBBP1AQ9BQG0 1328 aaKnown RBP7.49□□□□□ -1.21
HCG18-243ENST00000602498 CARMIL3Q8ND23 1372 aa7.48□□□□□ -1.21
HCG18-243ENST00000602498 A0A087WZG4 1122 aa7.48□□□□□ -1.21
HCG18-243ENST00000602498 GIGYF1O75420 1035 aaPredicted RBP7.48□□□□□ -1.21
HCG18-243ENST00000602498 CAMTA2O94983 1202 aa7.48□□□□□ -1.21
HCG18-243ENST00000602498 ANXA1P04083 346 aa7.48□□□□□ -1.21
HCG18-243ENST00000602498 MYL6BP14649 208 aa7.48□□□□□ -1.21
HCG18-243ENST00000602498 EIF2S2P20042 333 aaKnown RBP7.48□□□□□ -1.21
HCG18-243ENST00000602498 IL6STP40189 918 aaPredicted RBP7.48□□□□□ -1.21
HCG18-243ENST00000602498 RASSF7Q02833 373 aa7.48□□□□□ -1.21
HCG18-243ENST00000602498 WDR43Q15061 677 aaKnown RBP eCLIP7.48□□□□□ -1.21
HCG18-243ENST00000602498 KRT24Q2M2I5 525 aa7.48□□□□□ -1.21
HCG18-243ENST00000602498 C2CD5Q86YS7 1000 aa7.48□□□□□ -1.21
HCG18-243ENST00000602498 ZNF622Q969S3 477 aaKnown RBP eCLIP7.48□□□□□ -1.21
HCG18-243ENST00000602498 TEX13AQ9BXU3 409 aaPredicted RBP7.48□□□□□ -1.21
HCG18-243ENST00000602498 PIM2Q9P1W9 311 aa7.48□□□□□ -1.21
HCG18-243ENST00000602498 ATP10DQ9P241 1426 aa7.48□□□□□ -1.21
HCG18-243ENST00000602498 TSPYL4Q9UJ04 414 aa7.48□□□□□ -1.21
HCG18-243ENST00000602498 HTATSF1O43719 755 aaKnown RBP7.47□□□□□ -1.21
HCG18-243ENST00000602498 TMPOP42166 694 aaKnown RBP7.47□□□□□ -1.21
HCG18-243ENST00000602498 EIF4A1P60842 406 aaKnown RBP7.47□□□□□ -1.21
HCG18-243ENST00000602498 HLFQ16534 295 aa7.47□□□□□ -1.21
HCG18-243ENST00000602498 CCDC184Q52MB2 194 aa7.47□□□□□ -1.21
HCG18-243ENST00000602498 C9orf131Q5VYM1 1079 aa7.47□□□□□ -1.21
HCG18-243ENST00000602498 PRR5LQ6MZQ0 368 aa7.47□□□□□ -1.21
HCG18-243ENST00000602498 SETDB2Q96T68 719 aa7.47□□□□□ -1.21
HCG18-243ENST00000602498 GPBP1L1Q9HC44 474 aaPredicted RBP7.47□□□□□ -1.21
HCG18-243ENST00000602498 ADAMTS8Q9UP79 889 aa7.47□□□□□ -1.21
HCG18-243ENST00000602498 TUBGCP6Q96RT7 1819 aa7.47□□□□□ -1.21
HCG18-243ENST00000602498 ITGB4P16144 1822 aa7.46□□□□□ -1.21
HCG18-243ENST00000602498 GPTP24298 496 aa7.46□□□□□ -1.22
HCG18-243ENST00000602498 C1QTNF8P60827 252 aa7.46□□□□□ -1.22
HCG18-243ENST00000602498 TTLL7Q6ZT98 887 aa7.46□□□□□ -1.22
HCG18-243ENST00000602498 CNBD1Q8NA66 436 aa7.46□□□□□ -1.22
HCG18-243ENST00000602498 PNNQ9H307 717 aaKnown RBP7.46□□□□□ -1.22
HCG18-243ENST00000602498 ZBTB3Q9H5J0 574 aa7.46□□□□□ -1.22
HCG18-243ENST00000602498 PRKRIP1Q9H875 184 aaPredicted RBP7.46□□□□□ -1.22
HCG18-243ENST00000602498 NIP7Q9Y221 180 aaKnown RBP eCLIP7.46□□□□□ -1.22
HCG18-243ENST00000602498 H0YIN7 160 aa7.45□□□□□ -1.22
HCG18-243ENST00000602498 PROSER3Q2NL68 480 aa7.45□□□□□ -1.22
HCG18-243ENST00000602498 NBPF5PQ86XG9 351 aaPredicted RBP7.45□□□□□ -1.22
HCG18-243ENST00000602498 PNISRQ8TF01 805 aaKnown RBP7.45□□□□□ -1.22
HCG18-243ENST00000602498 RNF181Q9P0P0 153 aa7.45□□□□□ -1.22
HCG18-243ENST00000602498 APAF1O14727 1248 aa7.44□□□□□ -1.22
HCG18-243ENST00000602498 TCERG1O14776 1098 aaKnown RBP7.44□□□□□ -1.22
HCG18-243ENST00000602498 C21orf2O43822 256 aa7.44□□□□□ -1.22
HCG18-243ENST00000602498 GTF2E1P29083 439 aaPredicted RBP7.44□□□□□ -1.22
HCG18-243ENST00000602498 PRELPP51888 382 aa7.44□□□□□ -1.22
HCG18-243ENST00000602498 ST5P78524 1137 aa7.44□□□□□ -1.22
HCG18-243ENST00000602498 AIMP1Q12904 312 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms