RNA–Protein interactions for RNA: ENST00000601392.5

CELF4-222, Transcript of CUGBP Elav-like family member 4, humanhuman

TSL 1 (best)

Gene CELF4, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF4-222ENST00000601392 ATG3Q9NT62 314 aa16.45■□□□□ 0.22
CELF4-222ENST00000601392 MRC1P22897 1456 aa16.45■□□□□ 0.22
CELF4-222ENST00000601392 HOXB7P09629 217 aa16.44■□□□□ 0.22
CELF4-222ENST00000601392 BRPF1P55201 1214 aaPredicted RBP16.44■□□□□ 0.22
CELF4-222ENST00000601392 ALDH1L2Q3SY69 923 aa16.44■□□□□ 0.22
CELF4-222ENST00000601392 FLAD1Q8NFF5 587 aa16.44■□□□□ 0.22
CELF4-222ENST00000601392 SUPT16HQ9Y5B9 1047 aaKnown RBP16.44■□□□□ 0.22
CELF4-222ENST00000601392 VIRMAQ69YN4 1812 aaKnown RBP16.44■□□□□ 0.22
CELF4-222ENST00000601392 RARSP54136 660 aaKnown RBP16.43■□□□□ 0.22
CELF4-222ENST00000601392 NFATC2IPQ8NCF5 419 aa16.43■□□□□ 0.22
CELF4-222ENST00000601392 UBR3Q6ZT12 1888 aa16.43■□□□□ 0.22
CELF4-222ENST00000601392 PHF14O94880 888 aa16.42■□□□□ 0.22
CELF4-222ENST00000601392 EIF4A1P60842 406 aaKnown RBP16.42■□□□□ 0.22
CELF4-222ENST00000601392 TWISTNBQ3B726 338 aaPredicted RBP16.42■□□□□ 0.22
CELF4-222ENST00000601392 COL23A1Q86Y22 540 aaPredicted RBP16.42■□□□□ 0.22
CELF4-222ENST00000601392 KLHL34Q8N239 644 aa16.42■□□□□ 0.22
CELF4-222ENST00000601392 LINC00116Q8NCU8 138 aa16.42■□□□□ 0.22
CELF4-222ENST00000601392 SGIP1Q9BQI5 828 aa16.42■□□□□ 0.22
CELF4-222ENST00000601392 FHDC1Q9C0D6 1143 aaPredicted RBP16.42■□□□□ 0.22
CELF4-222ENST00000601392 COL24A1Q17RW2 1714 aa16.42■□□□□ 0.22
CELF4-222ENST00000601392 HEG1Q9ULI3 1381 aa16.41■□□□□ 0.22
CELF4-222ENST00000601392 ZNF831Q5JPB2 1677 aa16.41■□□□□ 0.22
CELF4-222ENST00000601392 GNPATO15228 680 aa16.41■□□□□ 0.22
CELF4-222ENST00000601392 ZNF790Q6PG37 636 aa16.41■□□□□ 0.22
CELF4-222ENST00000601392 C8orf58Q8NAV2 365 aa16.41■□□□□ 0.22
CELF4-222ENST00000601392 MIS18AQ9NYP9 233 aa16.41■□□□□ 0.22
CELF4-222ENST00000601392 ITPK1Q13572 414 aa16.4■□□□□ 0.22
CELF4-222ENST00000601392 MSL1Q68DK7 614 aa16.4■□□□□ 0.22
CELF4-222ENST00000601392 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.4■□□□□ 0.22
CELF4-222ENST00000601392 COL5A3P25940 1745 aaPredicted RBP16.39■□□□□ 0.21
CELF4-222ENST00000601392 TSPYL6Q8N831 410 aa16.39■□□□□ 0.21
CELF4-222ENST00000601392 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.38■□□□□ 0.21
CELF4-222ENST00000601392 PTCD1O75127 700 aaKnown RBP16.38■□□□□ 0.21
CELF4-222ENST00000601392 SSFA2P28290 1259 aa16.38■□□□□ 0.21
CELF4-222ENST00000601392 SYT17Q9BSW7 474 aa16.38■□□□□ 0.21
CELF4-222ENST00000601392 RRP1P56182 461 aaKnown RBP16.37■□□□□ 0.21
CELF4-222ENST00000601392 SIPA1L3O60292 1781 aaPredicted RBP16.36■□□□□ 0.21
CELF4-222ENST00000601392 GIGYF1O75420 1035 aaPredicted RBP16.36■□□□□ 0.21
CELF4-222ENST00000601392 ERICH6BQ5W0A0 696 aa16.36■□□□□ 0.21
CELF4-222ENST00000601392 TTC5Q8N0Z6 440 aa16.36■□□□□ 0.21
CELF4-222ENST00000601392 TJP1Q07157 1748 aa16.36■□□□□ 0.21
CELF4-222ENST00000601392 BCAR3O75815 825 aa16.35■□□□□ 0.21
CELF4-222ENST00000601392 CCDC30Q5VVM6 783 aa16.35■□□□□ 0.21
CELF4-222ENST00000601392 SMIM5Q71RC9 77 aa16.35■□□□□ 0.21
CELF4-222ENST00000601392 SSH1Q8WYL5 1049 aa16.35■□□□□ 0.21
CELF4-222ENST00000601392 ARHGAP45Q92619 1136 aa16.35■□□□□ 0.21
CELF4-222ENST00000601392 FMNL2Q96PY5 1086 aa16.35■□□□□ 0.21
CELF4-222ENST00000601392 SLC4A9Q96Q91 983 aa16.35■□□□□ 0.21
CELF4-222ENST00000601392 RTCBQ9Y3I0 505 aaKnown RBP16.35■□□□□ 0.21
CELF4-222ENST00000601392 CNTNAP4Q9C0A0 1308 aa16.35■□□□□ 0.21
CELF4-222ENST00000601392 CICQ96RK0 1608 aaPredicted RBP16.34■□□□□ 0.21
CELF4-222ENST00000601392 KDM3BQ7LBC6 1761 aa16.34■□□□□ 0.21
CELF4-222ENST00000601392 ELL2O00472 640 aaPredicted RBP16.34■□□□□ 0.21
CELF4-222ENST00000601392 IPO8O15397 1037 aaKnown RBP16.34■□□□□ 0.21
CELF4-222ENST00000601392 KCNQ3O43525 872 aa16.34■□□□□ 0.21
CELF4-222ENST00000601392 MS4A1P11836 297 aa16.34■□□□□ 0.21
CELF4-222ENST00000601392 AMIGO3Q86WK7 504 aa16.34■□□□□ 0.21
CELF4-222ENST00000601392 VSIG10Q8N0Z9 540 aa16.34■□□□□ 0.21
CELF4-222ENST00000601392 NEFLP07196 543 aa16.33■□□□□ 0.2
CELF4-222ENST00000601392 SNRPA1P09661 255 aaKnown RBP16.33■□□□□ 0.2
CELF4-222ENST00000601392 PDE3AQ14432 1141 aa16.33■□□□□ 0.2
CELF4-222ENST00000601392 KRT24Q2M2I5 525 aa16.33■□□□□ 0.2
CELF4-222ENST00000601392 TRAPPC3LQ5T215 181 aa16.33■□□□□ 0.2
CELF4-222ENST00000601392 MRPL50Q8N5N7 158 aaKnown RBP16.33■□□□□ 0.2
CELF4-222ENST00000601392 SMC4Q9NTJ3 1288 aa16.33■□□□□ 0.2
CELF4-222ENST00000601392 KIF16BQ96L93 1317 aa16.33■□□□□ 0.2
CELF4-222ENST00000601392 SLC39A6Q13433 755 aa16.32■□□□□ 0.2
CELF4-222ENST00000601392 RC3H1Q5TC82 1133 aaKnown RBP16.32■□□□□ 0.2
CELF4-222ENST00000601392 ZNF496Q96IT1 587 aaPredicted RBP16.32■□□□□ 0.2
CELF4-222ENST00000601392 TEX13AQ9BXU3 409 aaPredicted RBP16.32■□□□□ 0.2
CELF4-222ENST00000601392 ADRA2BP18089 450 aa16.31■□□□□ 0.2
CELF4-222ENST00000601392 PELP1Q8IZL8 1130 aaKnown RBP16.31■□□□□ 0.2
CELF4-222ENST00000601392 KCPQ6ZWJ8 1503 aa16.3■□□□□ 0.2
CELF4-222ENST00000601392 MYH14Q7Z406 1995 aaKnown RBP16.3■□□□□ 0.2
CELF4-222ENST00000601392 CRKLP46109 303 aaKnown RBP16.3■□□□□ 0.2
CELF4-222ENST00000601392 ZKSCAN2Q63HK3 967 aa16.3■□□□□ 0.2
CELF4-222ENST00000601392 STK31Q9BXU1 1019 aa16.3■□□□□ 0.2
CELF4-222ENST00000601392 UBR2Q8IWV8 1755 aa16.3■□□□□ 0.2
CELF4-222ENST00000601392 C4AP0C0L4 1744 aa16.3■□□□□ 0.2
CELF4-222ENST00000601392 ERBB4Q15303 1308 aa16.29■□□□□ 0.2
CELF4-222ENST00000601392 RPS6KA4O75676 772 aa16.29■□□□□ 0.2
CELF4-222ENST00000601392 RFC4P35249 363 aa16.29■□□□□ 0.2
CELF4-222ENST00000601392 GPR162Q16538 588 aa16.29■□□□□ 0.2
CELF4-222ENST00000601392 HDGFL1Q5TGJ6 251 aa16.29■□□□□ 0.2
CELF4-222ENST00000601392 DBF4Q9UBU7 674 aaPredicted RBP16.29■□□□□ 0.2
CELF4-222ENST00000601392 PTPRCP08575 1304 aa16.28■□□□□ 0.2
CELF4-222ENST00000601392 SLC4A2P04920 1241 aa16.28■□□□□ 0.2
CELF4-222ENST00000601392 ATF7IPQ6VMQ6 1270 aa16.28■□□□□ 0.2
CELF4-222ENST00000601392 DNAJC10Q8IXB1 793 aa16.28■□□□□ 0.2
CELF4-222ENST00000601392 NLGN2Q8NFZ4 835 aa16.28■□□□□ 0.2
CELF4-222ENST00000601392 YY1P25490 414 aa16.27■□□□□ 0.2
CELF4-222ENST00000601392 ARHGEF1Q92888 912 aaKnown RBP16.27■□□□□ 0.2
CELF4-222ENST00000601392 API5Q9BZZ5 524 aaKnown RBP16.27■□□□□ 0.2
CELF4-222ENST00000601392 CCDC87Q9NVE4 849 aa16.27■□□□□ 0.2
CELF4-222ENST00000601392 NOB1Q9ULX3 412 aaKnown RBP16.27■□□□□ 0.2
CELF4-222ENST00000601392 PLIN1O60240 522 aa16.26■□□□□ 0.19
CELF4-222ENST00000601392 NLGN1Q8N2Q7 840 aa16.26■□□□□ 0.19
CELF4-222ENST00000601392 FRAT1Q92837 279 aaPredicted RBP16.26■□□□□ 0.19
CELF4-222ENST00000601392 BCL2L13Q9BXK5 485 aa16.26■□□□□ 0.19
CELF4-222ENST00000601392 DDX21Q9NR30 783 aaKnown RBP eCLIP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms