RNA–Protein interactions for RNA: ENST00000601222.1

SIPA1L3-211, Transcript of signal induced proliferation associated 1 like 3, human

TSL 4

Gene SIPA1L3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIPA1L3-211	ENST00000601222	TMPO	P42166	694 aa	Known RBP	12.07	□□□□□ -0.48
SIPA1L3-211	ENST00000601222	RIPK4	P57078	832 aa		12.07	□□□□□ -0.48
SIPA1L3-211	ENST00000601222	KLHL34	Q8N239	644 aa		12.07	□□□□□ -0.48
SIPA1L3-211	ENST00000601222	PNISR	Q8TF01	805 aa	Known RBP	12.07	□□□□□ -0.48
SIPA1L3-211	ENST00000601222	ADAMTS8	Q9UP79	889 aa		12.07	□□□□□ -0.48
SIPA1L3-211	ENST00000601222	CD2AP	Q9Y5K6	639 aa		12.07	□□□□□ -0.48
SIPA1L3-211	ENST00000601222	USP42	Q9H9J4	1324 aa	Known RBP	12.07	□□□□□ -0.48
SIPA1L3-211	ENST00000601222	COL15A1	P39059	1388 aa		12.06	□□□□□ -0.48
SIPA1L3-211	ENST00000601222	MMP10	P09238	476 aa		12.06	□□□□□ -0.48
SIPA1L3-211	ENST00000601222	CCDC146	Q8IYE0	955 aa		12.06	□□□□□ -0.48
SIPA1L3-211	ENST00000601222	RUNDC1	Q96C34	613 aa		12.06	□□□□□ -0.48
SIPA1L3-211	ENST00000601222	SRP68	Q9UHB9	627 aa	Known RBP	12.06	□□□□□ -0.48
SIPA1L3-211	ENST00000601222	KIF13B	Q9NQT8	1826 aa		12.05	□□□□□ -0.48
SIPA1L3-211	ENST00000601222	ZPR1	O75312	459 aa		12.05	□□□□□ -0.48
SIPA1L3-211	ENST00000601222	SNRPA1	P09661	255 aa	Known RBP	12.05	□□□□□ -0.48
SIPA1L3-211	ENST00000601222	CANX	P27824	592 aa	Known RBP	12.05	□□□□□ -0.48
SIPA1L3-211	ENST00000601222	EIF5	P55010	431 aa	Known RBP	12.05	□□□□□ -0.48
SIPA1L3-211	ENST00000601222	LMOD3	Q0VAK6	560 aa		12.05	□□□□□ -0.48
SIPA1L3-211	ENST00000601222	NLGN2	Q8NFZ4	835 aa		12.05	□□□□□ -0.48
SIPA1L3-211	ENST00000601222	THUMPD2	Q9BTF0	503 aa	Known RBP	12.05	□□□□□ -0.48
SIPA1L3-211	ENST00000601222	MIS18A	Q9NYP9	233 aa		12.05	□□□□□ -0.48
SIPA1L3-211	ENST00000601222	CHD4	Q14839	1912 aa		12.05	□□□□□ -0.48
SIPA1L3-211	ENST00000601222	ANP32C	O43423	234 aa		12.04	□□□□□ -0.48
SIPA1L3-211	ENST00000601222	A1BG	P04217	495 aa		12.04	□□□□□ -0.48
SIPA1L3-211	ENST00000601222	FKBP8	Q14318	412 aa		12.04	□□□□□ -0.48
SIPA1L3-211	ENST00000601222	NARF	Q9UHQ1	456 aa		12.04	□□□□□ -0.48
SIPA1L3-211	ENST00000601222	USP16	Q9Y5T5	823 aa		12.04	□□□□□ -0.48
SIPA1L3-211	ENST00000601222		A0A087WZG4	1122 aa		12.03	□□□□□ -0.48
SIPA1L3-211	ENST00000601222	IL6ST	P40189	918 aa	Predicted RBP	12.03	□□□□□ -0.48
SIPA1L3-211	ENST00000601222	USPL1	Q5W0Q7	1092 aa		12.03	□□□□□ -0.48
SIPA1L3-211	ENST00000601222	RRP7A	Q9Y3A4	280 aa	Known RBP	12.03	□□□□□ -0.48
SIPA1L3-211	ENST00000601222	PARP3	Q9Y6F1	533 aa		12.03	□□□□□ -0.48
SIPA1L3-211	ENST00000601222	LAMB4	A4D0S4	1761 aa		12.02	□□□□□ -0.48
SIPA1L3-211	ENST00000601222	PRAMEF22	A3QJZ6	481 aa		12.02	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	EIF4A1	P60842	406 aa	Known RBP	12.02	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	NEUROD2	Q15784	382 aa		12.02	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	BABAM1	Q9NWV8	329 aa		12.02	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	GIGYF1	O75420	1035 aa	Predicted RBP	12.01	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	TM4SF1	P30408	202 aa		12.01	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	GPR162	Q16538	588 aa		12.01	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	CCDC184	Q52MB2	194 aa		12.01	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	BCL2L12	Q9HB09	334 aa		12.01	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	TSPYL4	Q9UJ04	414 aa		12.01	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	TRIM35	Q9UPQ4	493 aa		12.01	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	AFDN	P55196	1824 aa	Known RBP	12.01	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	C10orf71	Q711Q0	1435 aa		12.01	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	SCN7A	Q01118	1682 aa		12	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	POLRMT	O00411	1230 aa	Known RBP	12	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	DDR1	Q08345	913 aa		12	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	NPM2	Q86SE8	214 aa	Known RBP	12	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	ZNF330	Q9Y3S2	320 aa	Predicted RBP	12	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	N4BP2	Q86UW6	1770 aa	Predicted RBP	12	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	APAF1	O14727	1248 aa		11.99	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	TGFB2	P61812	414 aa		11.99	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	NFIX	Q14938	502 aa		11.99	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	TBC1D2B	Q9UPU7	963 aa		11.99	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	KIAA1551	Q9HCM1	1747 aa		11.99	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	NRXN2	Q9P2S2	1712 aa		11.99	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	BCOR	Q6W2J9	1755 aa		11.99	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	NBPF26	B4DH59	902 aa		11.98	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	CHL1	O00533	1208 aa		11.98	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	YBX3	P16989	372 aa	Known RBP eCLIP	11.98	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	PIP4K2A	P48426	406 aa	Predicted RBP	11.98	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	NBPF10	Q6P3W6	841 aa	Known RBP	11.98	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	PELP1	Q8IZL8	1130 aa	Known RBP	11.98	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	NBPF15	Q8N660	670 aa		11.98	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	BRCA1	P38398	1863 aa	Known RBP	11.97	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	PXDNL	A1KZ92	1463 aa		11.97	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	GRIN3B	O60391	1043 aa		11.97	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	CAMTA2	O94983	1202 aa		11.97	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	YY1	P25490	414 aa		11.97	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	DZIP3	Q86Y13	1208 aa	Known RBP	11.97	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	MRS2	Q9HD23	443 aa		11.97	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	RGL2	O15211	777 aa		11.96	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	TBC1D9B	Q66K14	1250 aa		11.96	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	CLEC4G	Q6UXB4	293 aa		11.96	□□□□□ -0.49
SIPA1L3-211	ENST00000601222	ERBB4	Q15303	1308 aa		11.95	□□□□□ -0.5
SIPA1L3-211	ENST00000601222		A0A0G2JLW4	131 aa		11.95	□□□□□ -0.5
SIPA1L3-211	ENST00000601222	SERPINB2	P05120	415 aa		11.95	□□□□□ -0.5
SIPA1L3-211	ENST00000601222	CFAP44	Q96MT7	982 aa		11.95	□□□□□ -0.5
SIPA1L3-211	ENST00000601222	LAS1L	Q9Y4W2	734 aa	Known RBP	11.95	□□□□□ -0.5
SIPA1L3-211	ENST00000601222	NUP98	P52948	1817 aa		11.95	□□□□□ -0.5
SIPA1L3-211	ENST00000601222	CARMIL3	Q8ND23	1372 aa		11.94	□□□□□ -0.5
SIPA1L3-211	ENST00000601222	DPEP1	P16444	411 aa		11.94	□□□□□ -0.5
SIPA1L3-211	ENST00000601222	CALD1	Q05682	793 aa	Known RBP	11.94	□□□□□ -0.5
SIPA1L3-211	ENST00000601222	BICDL1	Q6ZP65	573 aa		11.94	□□□□□ -0.5
SIPA1L3-211	ENST00000601222	SETDB2	Q96T68	719 aa		11.94	□□□□□ -0.5
SIPA1L3-211	ENST00000601222	ZNF652	Q9Y2D9	606 aa		11.94	□□□□□ -0.5
SIPA1L3-211	ENST00000601222	ARFGEF1	Q9Y6D6	1849 aa		11.93	□□□□□ -0.5
SIPA1L3-211	ENST00000601222	ZNF853	P0CG23	659 aa		11.93	□□□□□ -0.5
SIPA1L3-211	ENST00000601222	KCNA3	P22001	575 aa		11.93	□□□□□ -0.5
SIPA1L3-211	ENST00000601222	IFT57	Q9NWB7	429 aa		11.93	□□□□□ -0.5
SIPA1L3-211	ENST00000601222	WWC3	Q9ULE0	1092 aa		11.93	□□□□□ -0.5
SIPA1L3-211	ENST00000601222	ANKRD31	Q8N7Z5	1873 aa		11.92	□□□□□ -0.5
SIPA1L3-211	ENST00000601222	ERVV-1	B6SEH8	477 aa		11.92	□□□□□ -0.5
SIPA1L3-211	ENST00000601222	HOXB7	P09629	217 aa		11.92	□□□□□ -0.5
SIPA1L3-211	ENST00000601222	MYL6B	P14649	208 aa		11.92	□□□□□ -0.5
SIPA1L3-211	ENST00000601222	EIF2S2	P20042	333 aa	Known RBP	11.92	□□□□□ -0.5
SIPA1L3-211	ENST00000601222	PDIA6	Q15084	440 aa		11.92	□□□□□ -0.5
SIPA1L3-211	ENST00000601222	CCDC27	Q2M243	656 aa		11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms