RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 WWC1Q8IX03 1113 aa15.25■□□□□ 0.03
CHMP2A-207ENST00000600804 IL17REQ8NFR9 667 aa15.25■□□□□ 0.03
CHMP2A-207ENST00000600804 SLC4A9Q96Q91 983 aa15.25■□□□□ 0.03
CHMP2A-207ENST00000600804 SIPA1L3O60292 1781 aaPredicted RBP15.25■□□□□ 0.03
CHMP2A-207ENST00000600804 WDR90Q96KV7 1748 aa15.25■□□□□ 0.03
CHMP2A-207ENST00000600804 IL16Q14005 1332 aa15.24■□□□□ 0.03
CHMP2A-207ENST00000600804 ZBED9Q6R2W3 1325 aa15.24■□□□□ 0.03
CHMP2A-207ENST00000600804 HSPA6P17066 643 aa15.24■□□□□ 0.03
CHMP2A-207ENST00000600804 CALD1Q05682 793 aaKnown RBP15.24■□□□□ 0.03
CHMP2A-207ENST00000600804 WDR63Q8IWG1 891 aa15.24■□□□□ 0.03
CHMP2A-207ENST00000600804 RRP7AQ9Y3A4 280 aaKnown RBP15.24■□□□□ 0.03
CHMP2A-207ENST00000600804 AFDNP55196 1824 aaKnown RBP15.23■□□□□ 0.03
CHMP2A-207ENST00000600804 GNPATO15228 680 aa15.23■□□□□ 0.03
CHMP2A-207ENST00000600804 HNRNPUQ00839 825 aaKnown RBP eCLIP15.23■□□□□ 0.03
CHMP2A-207ENST00000600804 NEUROD2Q15784 382 aa15.23■□□□□ 0.03
CHMP2A-207ENST00000600804 ATG3Q9NT62 314 aa15.23■□□□□ 0.03
CHMP2A-207ENST00000600804 BABAM1Q9NWV8 329 aa15.23■□□□□ 0.03
CHMP2A-207ENST00000600804 C10orf71Q711Q0 1435 aa15.23■□□□□ 0.03
CHMP2A-207ENST00000600804 LGR6Q9HBX8 967 aa15.22■□□□□ 0.03
CHMP2A-207ENST00000600804 CCDC88AQ3V6T2 1871 aa15.22■□□□□ 0.03
CHMP2A-207ENST00000600804 ATP6V1AP38606 617 aa15.21■□□□□ 0.03
CHMP2A-207ENST00000600804 SLC52A2Q9HAB3 445 aa15.21■□□□□ 0.03
CHMP2A-207ENST00000600804 TMOD3Q9NYL9 352 aa15.21■□□□□ 0.03
CHMP2A-207ENST00000600804 MMP10P09238 476 aa15.2■□□□□ 0.02
CHMP2A-207ENST00000600804 MCM10Q7L590 875 aa15.2■□□□□ 0.02
CHMP2A-207ENST00000600804 DLEC1Q9Y238 1755 aa15.19■□□□□ 0.02
CHMP2A-207ENST00000600804 ZNF853P0CG23 659 aa15.19■□□□□ 0.02
CHMP2A-207ENST00000600804 HMGB2P26583 209 aaKnown RBP15.19■□□□□ 0.02
CHMP2A-207ENST00000600804 DCTN1Q14203 1278 aa15.19■□□□□ 0.02
CHMP2A-207ENST00000600804 TAF7Q15545 349 aaPredicted RBP15.19■□□□□ 0.02
CHMP2A-207ENST00000600804 CFAP44Q96MT7 982 aa15.19■□□□□ 0.02
CHMP2A-207ENST00000600804 IFT57Q9NWB7 429 aa15.19■□□□□ 0.02
CHMP2A-207ENST00000600804 CABP4P57796 275 aa15.18■□□□□ 0.02
CHMP2A-207ENST00000600804 TEFQ10587 303 aa15.18■□□□□ 0.02
CHMP2A-207ENST00000600804 KDM3BQ7LBC6 1761 aa15.17■□□□□ 0.02
CHMP2A-207ENST00000600804 CHL1O00533 1208 aa15.17■□□□□ 0.02
CHMP2A-207ENST00000600804 GNAI1P63096 354 aa15.17■□□□□ 0.02
CHMP2A-207ENST00000600804 GOLGA2Q08379 1002 aa15.17■□□□□ 0.02
CHMP2A-207ENST00000600804 THUMPD2Q9BTF0 503 aaKnown RBP15.17■□□□□ 0.02
CHMP2A-207ENST00000600804 A0A0G2JLW4 131 aa15.16■□□□□ 0.02
CHMP2A-207ENST00000600804 E9PSI1 815 aa15.16■□□□□ 0.02
CHMP2A-207ENST00000600804 NFATC2IPQ8NCF5 419 aa15.16■□□□□ 0.02
CHMP2A-207ENST00000600804 TNRC6CQ9HCJ0 1690 aaKnown RBP15.16■□□□□ 0.02
CHMP2A-207ENST00000600804 NRXN2Q9P2S2 1712 aa15.15■□□□□ 0.02
CHMP2A-207ENST00000600804 GYS1P13807 737 aa15.15■□□□□ 0.02
CHMP2A-207ENST00000600804 KCNA3P22001 575 aa15.15■□□□□ 0.02
CHMP2A-207ENST00000600804 TRMT2AQ8IZ69 625 aaKnown RBP15.15■□□□□ 0.02
CHMP2A-207ENST00000600804 ARHGEF1Q92888 912 aaKnown RBP15.15■□□□□ 0.02
CHMP2A-207ENST00000600804 SALL2Q9Y467 1007 aaPredicted RBP15.15■□□□□ 0.02
CHMP2A-207ENST00000600804 UBR2Q8IWV8 1755 aa15.14■□□□□ 0.01
CHMP2A-207ENST00000600804 DPEP1P16444 411 aa15.14■□□□□ 0.01
CHMP2A-207ENST00000600804 SLFN5Q08AF3 891 aa15.14■□□□□ 0.01
CHMP2A-207ENST00000600804 BCS1LQ9Y276 419 aa15.14■□□□□ 0.01
CHMP2A-207ENST00000600804 CNTNAP4Q9C0A0 1308 aa15.14■□□□□ 0.01
CHMP2A-207ENST00000600804 BTBD11A6QL63 1104 aa15.13■□□□□ 0.01
CHMP2A-207ENST00000600804 TGFB2P61812 414 aa15.13■□□□□ 0.01
CHMP2A-207ENST00000600804 TRAPPC3LQ5T215 181 aa15.13■□□□□ 0.01
CHMP2A-207ENST00000600804 TIAM2Q8IVF5 1701 aa15.13■□□□□ 0.01
CHMP2A-207ENST00000600804 DNAJC5GQ8N7S2 189 aa15.13■□□□□ 0.01
CHMP2A-207ENST00000600804 MYH16Q9H6N6 1097 aa15.13■□□□□ 0.01
CHMP2A-207ENST00000600804 NMRK2Q9NPI5 230 aa15.13■□□□□ 0.01
CHMP2A-207ENST00000600804 RTCBQ9Y3I0 505 aaKnown RBP15.13■□□□□ 0.01
CHMP2A-207ENST00000600804 HEG1Q9ULI3 1381 aa15.12■□□□□ 0.01
CHMP2A-207ENST00000600804 RC3H1Q5TC82 1133 aaKnown RBP15.12■□□□□ 0.01
CHMP2A-207ENST00000600804 ZNF790Q6PG37 636 aa15.12■□□□□ 0.01
CHMP2A-207ENST00000600804 RBM42Q9BTD8 480 aaKnown RBP15.12■□□□□ 0.01
CHMP2A-207ENST00000600804 RPS6KA4O75676 772 aa15.11■□□□□ 0.01
CHMP2A-207ENST00000600804 NLGN1Q8N2Q7 840 aa15.11■□□□□ 0.01
CHMP2A-207ENST00000600804 SPINK5Q9NQ38 1064 aaPredicted RBP15.11■□□□□ 0.01
CHMP2A-207ENST00000600804 TSPYL4Q9UJ04 414 aa15.11■□□□□ 0.01
CHMP2A-207ENST00000600804 ANKRD31Q8N7Z5 1873 aa15.11■□□□□ 0.01
CHMP2A-207ENST00000600804 KCPQ6ZWJ8 1503 aa15.11■□□□□ 0.01
CHMP2A-207ENST00000600804 SOS1Q07889 1333 aaPredicted RBP15.11■□□□□ 0.01
CHMP2A-207ENST00000600804 CACNA1SQ13698 1873 aa15.1■□□□□ 0.01
CHMP2A-207ENST00000600804 DDR1Q08345 913 aa15.1■□□□□ 0.01
CHMP2A-207ENST00000600804 MBIPQ9NS73 344 aa15.1■□□□□ 0.01
CHMP2A-207ENST00000600804 SRP68Q9UHB9 627 aaKnown RBP15.1■□□□□ 0.01
CHMP2A-207ENST00000600804 FANCIQ9NVI1 1328 aa15.1■□□□□ 0.01
CHMP2A-207ENST00000600804 TOMM70O94826 608 aa15.09■□□□□ 0.01
CHMP2A-207ENST00000600804 ADRA2BP18089 450 aa15.09■□□□□ 0.01
CHMP2A-207ENST00000600804 DUSP27Q5VZP5 1158 aa15.09■□□□□ 0.01
CHMP2A-207ENST00000600804 ARHGAP27Q6ZUM4 889 aa15.09■□□□□ 0.01
CHMP2A-207ENST00000600804 TTC5Q8N0Z6 440 aa15.09■□□□□ 0.01
CHMP2A-207ENST00000600804 VSIG10Q8N0Z9 540 aa15.09■□□□□ 0.01
CHMP2A-207ENST00000600804 DICER1Q9UPY3 1922 aaKnown RBP15.09■□□□□ 0.01
CHMP2A-207ENST00000600804 HOXB7P09629 217 aa15.08■□□□□ 0
CHMP2A-207ENST00000600804 EIF4A1P60842 406 aaKnown RBP15.08■□□□□ 0
CHMP2A-207ENST00000600804 FKBP8Q14318 412 aa15.08■□□□□ 0
CHMP2A-207ENST00000600804 CDCA7LQ96GN5 454 aa15.08■□□□□ 0
CHMP2A-207ENST00000600804 CCDC87Q9NVE4 849 aa15.08■□□□□ 0
CHMP2A-207ENST00000600804 COL11A2P13942 1736 aaPredicted RBP15.08■□□□□ 0
CHMP2A-207ENST00000600804 CT47B1P0C2W7 299 aaPredicted RBP15.07■□□□□ 0
CHMP2A-207ENST00000600804 RFC4P35249 363 aa15.07■□□□□ 0
CHMP2A-207ENST00000600804 APLP1P51693 650 aa15.07■□□□□ 0
CHMP2A-207ENST00000600804 HTRA3P83110 453 aa15.07■□□□□ 0
CHMP2A-207ENST00000600804 SLC39A6Q13433 755 aa15.07■□□□□ 0
CHMP2A-207ENST00000600804 YTHDC1Q96MU7 727 aaKnown RBP15.07■□□□□ 0
CHMP2A-207ENST00000600804 FMNL2Q96PY5 1086 aa15.07■□□□□ 0
CHMP2A-207ENST00000600804 MIS18AQ9NYP9 233 aa15.07■□□□□ 0
CHMP2A-207ENST00000600804 LAS1LQ9Y4W2 734 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms