RNA–Protein interactions for RNA: ENST00000600020.5

USP29-203, Transcript of ubiquitin specific peptidase 29, humanhuman

TSL 3

Gene USP29, Length 437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-203ENST00000600020 DDR1Q08345 913 aa9.69□□□□□ -0.86
USP29-203ENST00000600020 FKBP8Q14318 412 aa9.69□□□□□ -0.86
USP29-203ENST00000600020 RC3H1Q5TC82 1133 aaKnown RBP9.69□□□□□ -0.86
USP29-203ENST00000600020 SLC52A2Q9HAB3 445 aa9.69□□□□□ -0.86
USP29-203ENST00000600020 MRS2Q9HD23 443 aa9.69□□□□□ -0.86
USP29-203ENST00000600020 CEMIPQ8WUJ3 1361 aa9.68□□□□□ -0.86
USP29-203ENST00000600020 U2SURPO15042 1029 aaKnown RBP9.68□□□□□ -0.86
USP29-203ENST00000600020 FCHSD2O94868 740 aa9.68□□□□□ -0.86
USP29-203ENST00000600020 TGFB2P61812 414 aa9.68□□□□□ -0.86
USP29-203ENST00000600020 CCDC184Q52MB2 194 aa9.68□□□□□ -0.86
USP29-203ENST00000600020 NLGN1Q8N2Q7 840 aa9.68□□□□□ -0.86
USP29-203ENST00000600020 PHACTR3Q96KR7 559 aa9.68□□□□□ -0.86
USP29-203ENST00000600020 NMRK2Q9NPI5 230 aa9.68□□□□□ -0.86
USP29-203ENST00000600020 LAMB4A4D0S4 1761 aa9.68□□□□□ -0.86
USP29-203ENST00000600020 USP42Q9H9J4 1324 aaKnown RBP9.67□□□□□ -0.86
USP29-203ENST00000600020 CHRNA5P30532 468 aa9.67□□□□□ -0.86
USP29-203ENST00000600020 ARHGAP27Q6ZUM4 889 aa9.67□□□□□ -0.86
USP29-203ENST00000600020 IL17REQ8NFR9 667 aa9.67□□□□□ -0.86
USP29-203ENST00000600020 GAS2L2Q8NHY3 880 aa9.67□□□□□ -0.86
USP29-203ENST00000600020 YTHDC1Q96MU7 727 aaKnown RBP9.67□□□□□ -0.86
USP29-203ENST00000600020 CCDC87Q9NVE4 849 aa9.67□□□□□ -0.86
USP29-203ENST00000600020 NUDCQ9Y266 331 aa9.67□□□□□ -0.86
USP29-203ENST00000600020 PARP3Q9Y6F1 533 aa9.67□□□□□ -0.86
USP29-203ENST00000600020 ARFGEF1Q9Y6D6 1849 aa9.66□□□□□ -0.86
USP29-203ENST00000600020 NRXN2Q9P2S2 1712 aa9.66□□□□□ -0.86
USP29-203ENST00000600020 GNAT3A8MTJ3 354 aa9.66□□□□□ -0.86
USP29-203ENST00000600020 PRKAR2BP31323 418 aa9.66□□□□□ -0.86
USP29-203ENST00000600020 SLC39A6Q13433 755 aa9.66□□□□□ -0.86
USP29-203ENST00000600020 INTS5Q6P9B9 1019 aaKnown RBP9.66□□□□□ -0.86
USP29-203ENST00000600020 DNAJC10Q8IXB1 793 aa9.66□□□□□ -0.86
USP29-203ENST00000600020 BCORQ6W2J9 1755 aa9.65□□□□□ -0.86
USP29-203ENST00000600020 POLRMTO00411 1230 aaKnown RBP9.65□□□□□ -0.86
USP29-203ENST00000600020 U2AF1L5P0DN76 240 aaPredicted RBP9.65□□□□□ -0.86
USP29-203ENST00000600020 U2AF1Q01081 240 aaKnown RBP eCLIP9.65□□□□□ -0.86
USP29-203ENST00000600020 C9orf131Q5VYM1 1079 aa9.65□□□□□ -0.86
USP29-203ENST00000600020 USPL1Q5W0Q7 1092 aa9.65□□□□□ -0.86
USP29-203ENST00000600020 DLEC1Q9Y238 1755 aa9.65□□□□□ -0.87
USP29-203ENST00000600020 SOS1Q07889 1333 aaPredicted RBP9.64□□□□□ -0.87
USP29-203ENST00000600020 HTRA3P83110 453 aa9.64□□□□□ -0.87
USP29-203ENST00000600020 CACNB1Q02641 598 aaPredicted RBP9.64□□□□□ -0.87
USP29-203ENST00000600020 VSIG10Q8N0Z9 540 aa9.64□□□□□ -0.87
USP29-203ENST00000600020 PNISRQ8TF01 805 aaKnown RBP9.64□□□□□ -0.87
USP29-203ENST00000600020 PLEKHF1Q96S99 279 aa9.64□□□□□ -0.87
USP29-203ENST00000600020 SCN7AQ01118 1682 aa9.64□□□□□ -0.87
USP29-203ENST00000600020 NUP98P52948 1817 aa9.63□□□□□ -0.87
USP29-203ENST00000600020 HTATSF1O43719 755 aaKnown RBP9.63□□□□□ -0.87
USP29-203ENST00000600020 CYP19A1P11511 503 aaPredicted RBP9.63□□□□□ -0.87
USP29-203ENST00000600020 RASSF7Q02833 373 aa9.63□□□□□ -0.87
USP29-203ENST00000600020 ZBTB1Q9Y2K1 713 aa9.63□□□□□ -0.87
USP29-203ENST00000600020 CARMIL3Q8ND23 1372 aa9.63□□□□□ -0.87
USP29-203ENST00000600020 SBF1O95248 1867 aa9.62□□□□□ -0.87
USP29-203ENST00000600020 CCDC88AQ3V6T2 1871 aa9.62□□□□□ -0.87
USP29-203ENST00000600020 ANKRD31Q8N7Z5 1873 aa9.62□□□□□ -0.87
USP29-203ENST00000600020 TOMM70O94826 608 aa9.62□□□□□ -0.87
USP29-203ENST00000600020 CENPBP07199 599 aaPredicted RBP9.62□□□□□ -0.87
USP29-203ENST00000600020 TM4SF1P30408 202 aa9.62□□□□□ -0.87
USP29-203ENST00000600020 PRELPP51888 382 aa9.62□□□□□ -0.87
USP29-203ENST00000600020 NFIXQ14938 502 aa9.62□□□□□ -0.87
USP29-203ENST00000600020 DALRD3Q5D0E6 543 aaKnown RBP9.62□□□□□ -0.87
USP29-203ENST00000600020 ZNF790Q6PG37 636 aa9.62□□□□□ -0.87
USP29-203ENST00000600020 FAM9BQ8IZU0 186 aa9.62□□□□□ -0.87
USP29-203ENST00000600020 RNF181Q9P0P0 153 aa9.62□□□□□ -0.87
USP29-203ENST00000600020 PIM2Q9P1W9 311 aa9.62□□□□□ -0.87
USP29-203ENST00000600020 COL15A1P39059 1388 aa9.62□□□□□ -0.87
USP29-203ENST00000600020 SLC34A2O95436 690 aa9.61□□□□□ -0.87
USP29-203ENST00000600020 APLP1P51693 650 aa9.61□□□□□ -0.87
USP29-203ENST00000600020 TEFQ10587 303 aa9.61□□□□□ -0.87
USP29-203ENST00000600020 DNAJC5GQ8N7S2 189 aa9.61□□□□□ -0.87
USP29-203ENST00000600020 BCL2L12Q9HB09 334 aa9.61□□□□□ -0.87
USP29-203ENST00000600020 HEG1Q9ULI3 1381 aa9.61□□□□□ -0.87
USP29-203ENST00000600020 CACNA1SQ13698 1873 aa9.6□□□□□ -0.87
USP29-203ENST00000600020 WDR90Q96KV7 1748 aa9.6□□□□□ -0.87
USP29-203ENST00000600020 ZPR1O75312 459 aa9.6□□□□□ -0.87
USP29-203ENST00000600020 ZNF496Q96IT1 587 aaPredicted RBP9.6□□□□□ -0.87
USP29-203ENST00000600020 MCM10Q7L590 875 aa9.59□□□□□ -0.87
USP29-203ENST00000600020 TEX13AQ9BXU3 409 aaPredicted RBP9.59□□□□□ -0.87
USP29-203ENST00000600020 PNNQ9H307 717 aaKnown RBP9.59□□□□□ -0.87
USP29-203ENST00000600020 NARFQ9UHQ1 456 aa9.59□□□□□ -0.87
USP29-203ENST00000600020 ARFGEF2Q9Y6D5 1785 aa9.58□□□□□ -0.88
USP29-203ENST00000600020 BTBD11A6QL63 1104 aa9.58□□□□□ -0.88
USP29-203ENST00000600020 CANXP27824 592 aaKnown RBP9.58□□□□□ -0.88
USP29-203ENST00000600020 NFE2L2Q16236 605 aa9.58□□□□□ -0.88
USP29-203ENST00000600020 BICDL1Q6ZP65 573 aa9.58□□□□□ -0.88
USP29-203ENST00000600020 TTC5Q8N0Z6 440 aa9.58□□□□□ -0.88
USP29-203ENST00000600020 CCDC24Q8N4L8 307 aa9.58□□□□□ -0.88
USP29-203ENST00000600020 RBM46Q8TBY0 533 aaKnown RBP9.58□□□□□ -0.88
USP29-203ENST00000600020 RTF1Q92541 710 aaKnown RBP9.58□□□□□ -0.88
USP29-203ENST00000600020 FMNL2Q96PY5 1086 aa9.58□□□□□ -0.88
USP29-203ENST00000600020 RRAGCQ9HB90 399 aa9.58□□□□□ -0.88
USP29-203ENST00000600020 TNRC6CQ9HCJ0 1690 aaKnown RBP9.58□□□□□ -0.88
USP29-203ENST00000600020 ANKRD36CQ5JPF3 1778 aa9.58□□□□□ -0.88
USP29-203ENST00000600020 COL11A2P13942 1736 aaPredicted RBP9.57□□□□□ -0.88
USP29-203ENST00000600020 TIAM2Q8IVF5 1701 aa9.57□□□□□ -0.88
USP29-203ENST00000600020 KCNQ3O43525 872 aa9.57□□□□□ -0.88
USP29-203ENST00000600020 STARD3NLO95772 234 aa9.57□□□□□ -0.88
USP29-203ENST00000600020 SERPINB2P05120 415 aa9.57□□□□□ -0.88
USP29-203ENST00000600020 EIF5P55010 431 aaKnown RBP9.57□□□□□ -0.88
USP29-203ENST00000600020 DCTN1Q14203 1278 aa9.57□□□□□ -0.88
USP29-203ENST00000600020 TAF7Q15545 349 aaPredicted RBP9.57□□□□□ -0.88
USP29-203ENST00000600020 C16orf71Q8IYS4 520 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms