RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-208ENST00000598594 MTMR3Q13615 1198 aa6.77□□□□□ -1.33
PAF1-208ENST00000598594 PADI6Q6TGC4 694 aa6.77□□□□□ -1.33
PAF1-208ENST00000598594 CKAP2LQ8IYA6 745 aa6.77□□□□□ -1.33
PAF1-208ENST00000598594 ZNF654Q8IZM8 581 aa6.77□□□□□ -1.33
PAF1-208ENST00000598594 SECISBP2LQ93073 1101 aaKnown RBP6.77□□□□□ -1.33
PAF1-208ENST00000598594 TSR2Q969E8 191 aaKnown RBP6.77□□□□□ -1.33
PAF1-208ENST00000598594 ZNF512BQ96KM6 892 aaPredicted RBP6.77□□□□□ -1.33
PAF1-208ENST00000598594 DDX41Q9UJV9 622 aaKnown RBP6.77□□□□□ -1.33
PAF1-208ENST00000598594 DNMT3AQ9Y6K1 912 aaPredicted RBP6.77□□□□□ -1.33
PAF1-208ENST00000598594 TNFRSF10BO14763 440 aa6.76□□□□□ -1.33
PAF1-208ENST00000598594 MAPK8P45983 427 aa6.76□□□□□ -1.33
PAF1-208ENST00000598594 FMR1Q06787 632 aaKnown RBP eCLIP6.76□□□□□ -1.33
PAF1-208ENST00000598594 CBLBQ13191 982 aa6.76□□□□□ -1.33
PAF1-208ENST00000598594 ZNF394Q53GI3 561 aa6.76□□□□□ -1.33
PAF1-208ENST00000598594 IFFO2Q5TF58 517 aa6.76□□□□□ -1.33
PAF1-208ENST00000598594 SDR16C5Q8N3Y7 309 aa6.76□□□□□ -1.33
PAF1-208ENST00000598594 CXorf38Q8TB03 319 aa6.76□□□□□ -1.33
PAF1-208ENST00000598594 FAM174AQ8TBP5 190 aa6.76□□□□□ -1.33
PAF1-208ENST00000598594 KCNK17Q96T54 332 aa6.76□□□□□ -1.33
PAF1-208ENST00000598594 APBA2Q99767 749 aa6.76□□□□□ -1.33
PAF1-208ENST00000598594 PAGR1Q9BTK6 254 aa6.76□□□□□ -1.33
PAF1-208ENST00000598594 SLC4A5Q9BY07 1137 aa6.76□□□□□ -1.33
PAF1-208ENST00000598594 ARHGEF10LQ9HCE6 1279 aa6.76□□□□□ -1.33
PAF1-208ENST00000598594 PCDHGB7Q9Y5F8 929 aa6.76□□□□□ -1.33
PAF1-208ENST00000598594 EMILIN1Q9Y6C2 1016 aa6.76□□□□□ -1.33
PAF1-208ENST00000598594 KIF3BO15066 747 aa6.75□□□□□ -1.33
PAF1-208ENST00000598594 TREHO43280 583 aa6.75□□□□□ -1.33
PAF1-208ENST00000598594 COPB2P35606 906 aa6.75□□□□□ -1.33
PAF1-208ENST00000598594 PDE6BP35913 854 aa6.75□□□□□ -1.33
PAF1-208ENST00000598594 USP5P45974 858 aa6.75□□□□□ -1.33
PAF1-208ENST00000598594 SF3B2Q13435 895 aaKnown RBP6.75□□□□□ -1.33
PAF1-208ENST00000598594 SERINC3Q13530 473 aa6.75□□□□□ -1.33
PAF1-208ENST00000598594 HDAC1Q13547 482 aaPredicted RBP6.75□□□□□ -1.33
PAF1-208ENST00000598594 NCOA4Q13772 614 aa6.75□□□□□ -1.33
PAF1-208ENST00000598594 NR6A1Q15406 480 aa6.75□□□□□ -1.33
PAF1-208ENST00000598594 OCLNQ16625 522 aa6.75□□□□□ -1.33
PAF1-208ENST00000598594 SYCP2LQ5T4T6 812 aa6.75□□□□□ -1.33
PAF1-208ENST00000598594 TTC39BQ5VTQ0 682 aaPredicted RBP6.75□□□□□ -1.33
PAF1-208ENST00000598594 RAVER1Q8IY67 606 aaKnown RBP6.75□□□□□ -1.33
PAF1-208ENST00000598594 MKL1Q969V6 931 aa6.75□□□□□ -1.33
PAF1-208ENST00000598594 RELTQ969Z4 430 aa6.75□□□□□ -1.33
PAF1-208ENST00000598594 PCGF6Q9BYE7 350 aa6.75□□□□□ -1.33
PAF1-208ENST00000598594 RBCK1Q9BYM8 510 aa6.75□□□□□ -1.33
PAF1-208ENST00000598594 TMX1Q9H3N1 280 aa6.75□□□□□ -1.33
PAF1-208ENST00000598594 ANO8Q9HCE9 1232 aaPredicted RBP6.75□□□□□ -1.33
PAF1-208ENST00000598594 SEPT3Q9UH03 358 aa6.75□□□□□ -1.33
PAF1-208ENST00000598594 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.74□□□□□ -1.33
PAF1-208ENST00000598594 IFRD1O00458 451 aaPredicted RBP6.74□□□□□ -1.33
PAF1-208ENST00000598594 FGAP02671 866 aa6.74□□□□□ -1.33
PAF1-208ENST00000598594 CHMP4BP1P59074 171 aa6.74□□□□□ -1.33
PAF1-208ENST00000598594 RBM10P98175 930 aaKnown RBP6.74□□□□□ -1.33
PAF1-208ENST00000598594 POU5F1BQ06416 359 aa6.74□□□□□ -1.33
PAF1-208ENST00000598594 NR1H3Q13133 447 aa6.74□□□□□ -1.33
PAF1-208ENST00000598594 SLF2Q8IX21 1173 aa6.74□□□□□ -1.33
PAF1-208ENST00000598594 OGFOD1Q8N543 542 aa6.74□□□□□ -1.33
PAF1-208ENST00000598594 PDILTQ8N807 584 aa6.74□□□□□ -1.33
PAF1-208ENST00000598594 SLC39A13Q96H72 371 aa6.74□□□□□ -1.33
PAF1-208ENST00000598594 ZNF594Q96JF6 807 aaPredicted RBP6.74□□□□□ -1.33
PAF1-208ENST00000598594 SRPK1Q96SB4 655 aaKnown RBP6.74□□□□□ -1.33
PAF1-208ENST00000598594 INO80BQ9C086 356 aaPredicted RBP6.74□□□□□ -1.33
PAF1-208ENST00000598594 BCL2L12Q9HB09 334 aa6.74□□□□□ -1.33
PAF1-208ENST00000598594 HOMER2Q9NSB8 354 aa6.74□□□□□ -1.33
PAF1-208ENST00000598594 VPS9D1Q9Y2B5 631 aa6.74□□□□□ -1.33
PAF1-208ENST00000598594 SCINQ9Y6U3 715 aa6.74□□□□□ -1.33
PAF1-208ENST00000598594 SETD1BQ9UPS6 1966 aaKnown RBP6.73□□□□□ -1.33
PAF1-208ENST00000598594 CAND2O75155 1236 aa6.73□□□□□ -1.33
PAF1-208ENST00000598594 CDC45O75419 566 aa6.73□□□□□ -1.33
PAF1-208ENST00000598594 FOSP01100 380 aaPredicted RBP6.73□□□□□ -1.33
PAF1-208ENST00000598594 MAN1A1P33908 653 aa6.73□□□□□ -1.33
PAF1-208ENST00000598594 NBPF6Q5VWK0 638 aa6.73□□□□□ -1.33
PAF1-208ENST00000598594 PPP4R4Q6NUP7 873 aa6.73□□□□□ -1.33
PAF1-208ENST00000598594 NBPF4Q96M43 638 aa6.73□□□□□ -1.33
PAF1-208ENST00000598594 CEP63Q96MT8 703 aa6.73□□□□□ -1.33
PAF1-208ENST00000598594 ARPC5LQ9BPX5 153 aa6.73□□□□□ -1.33
PAF1-208ENST00000598594 C12orf49Q9H741 205 aa6.73□□□□□ -1.33
PAF1-208ENST00000598594 AVENQ9NQS1 362 aaPredicted RBP6.73□□□□□ -1.33
PAF1-208ENST00000598594 FANCLQ9NW38 375 aa6.73□□□□□ -1.33
PAF1-208ENST00000598594 DDX11L8A8MPP1 907 aa6.72□□□□□ -1.33
PAF1-208ENST00000598594 NRDCO43847 1150 aa6.72□□□□□ -1.33
PAF1-208ENST00000598594 KRT18P05783 430 aaKnown RBP6.72□□□□□ -1.33
PAF1-208ENST00000598594 ATF4P18848 351 aaPredicted RBP6.72□□□□□ -1.33
PAF1-208ENST00000598594 NOS2P35228 1153 aa6.72□□□□□ -1.33
PAF1-208ENST00000598594 PLCB3Q01970 1234 aa6.72□□□□□ -1.33
PAF1-208ENST00000598594 BRD3Q15059 726 aa6.72□□□□□ -1.33
PAF1-208ENST00000598594 VPS72Q15906 364 aa6.72□□□□□ -1.33
PAF1-208ENST00000598594 USP48Q86UV5 1035 aa6.72□□□□□ -1.33
PAF1-208ENST00000598594 SULF1Q8IWU6 871 aa6.72□□□□□ -1.33
PAF1-208ENST00000598594 SAMD3Q8N6K7 520 aa6.72□□□□□ -1.33
PAF1-208ENST00000598594 PAF1Q8N7H5 531 aa6.72□□□□□ -1.33
PAF1-208ENST00000598594 C1orf131Q8NDD1 294 aaKnown RBP6.72□□□□□ -1.33
PAF1-208ENST00000598594 PPM1EQ8WY54 764 aa6.72□□□□□ -1.33
PAF1-208ENST00000598594 CASS4Q9NQ75 786 aa6.72□□□□□ -1.33
PAF1-208ENST00000598594 TPX2Q9ULW0 747 aaKnown RBP6.72□□□□□ -1.33
PAF1-208ENST00000598594 PHF14O94880 888 aa6.71□□□□□ -1.34
PAF1-208ENST00000598594 FDX1P10109 184 aa6.71□□□□□ -1.34
PAF1-208ENST00000598594 POU5F1Q01860 360 aaKnown RBP6.71□□□□□ -1.34
PAF1-208ENST00000598594 KCNH2Q12809 1159 aa6.71□□□□□ -1.34
PAF1-208ENST00000598594 ICE2Q659A1 982 aa6.71□□□□□ -1.34
PAF1-208ENST00000598594 ZNF454Q8N9F8 522 aa6.71□□□□□ -1.34
PAF1-208ENST00000598594 TMC1Q8TDI8 760 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms