RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 NPM2Q86SE8 214 aaKnown RBP19.34■□□□□ 0.69
XRCC1-208ENST00000598422 PLEKHF1Q96S99 279 aa19.34■□□□□ 0.69
XRCC1-208ENST00000598422 ZNF330Q9Y3S2 320 aaPredicted RBP19.34■□□□□ 0.69
XRCC1-208ENST00000598422 KCNQ3O43525 872 aa19.33■□□□□ 0.68
XRCC1-208ENST00000598422 YBX3P16989 372 aaKnown RBP eCLIP19.33■□□□□ 0.68
XRCC1-208ENST00000598422 USPL1Q5W0Q7 1092 aa19.33■□□□□ 0.68
XRCC1-208ENST00000598422 A0A087WZG4 1122 aa19.32■□□□□ 0.68
XRCC1-208ENST00000598422 WDR43Q15061 677 aaKnown RBP eCLIP19.32■□□□□ 0.68
XRCC1-208ENST00000598422 TAF7Q15545 349 aaPredicted RBP19.31■□□□□ 0.68
XRCC1-208ENST00000598422 NARFQ9UHQ1 456 aa19.31■□□□□ 0.68
XRCC1-208ENST00000598422 WWC3Q9ULE0 1092 aa19.31■□□□□ 0.68
XRCC1-208ENST00000598422 C10orf71Q711Q0 1435 aa19.31■□□□□ 0.68
XRCC1-208ENST00000598422 UBR2Q8IWV8 1755 aa19.31■□□□□ 0.68
XRCC1-208ENST00000598422 MYH14Q7Z406 1995 aaKnown RBP19.3■□□□□ 0.68
XRCC1-208ENST00000598422 PNISRQ8TF01 805 aaKnown RBP19.3■□□□□ 0.68
XRCC1-208ENST00000598422 C4AP0C0L4 1744 aa19.3■□□□□ 0.68
XRCC1-208ENST00000598422 SNRPA1P09661 255 aaKnown RBP19.29■□□□□ 0.68
XRCC1-208ENST00000598422 TGFB2P61812 414 aa19.29■□□□□ 0.68
XRCC1-208ENST00000598422 DDR1Q08345 913 aa19.29■□□□□ 0.68
XRCC1-208ENST00000598422 PRKRIP1Q9H875 184 aaPredicted RBP19.29■□□□□ 0.68
XRCC1-208ENST00000598422 IL6STP40189 918 aaPredicted RBP19.28■□□□□ 0.68
XRCC1-208ENST00000598422 EIF5P55010 431 aaKnown RBP19.28■□□□□ 0.68
XRCC1-208ENST00000598422 PXDNLA1KZ92 1463 aa19.28■□□□□ 0.68
XRCC1-208ENST00000598422 SIPA1L3O60292 1781 aaPredicted RBP19.27■□□□□ 0.68
XRCC1-208ENST00000598422 A1BGP04217 495 aa19.27■□□□□ 0.68
XRCC1-208ENST00000598422 LMOD3Q0VAK6 560 aa19.27■□□□□ 0.68
XRCC1-208ENST00000598422 THUMPD2Q9BTF0 503 aaKnown RBP19.27■□□□□ 0.68
XRCC1-208ENST00000598422 VIRMAQ69YN4 1812 aaKnown RBP19.27■□□□□ 0.68
XRCC1-208ENST00000598422 POLRMTO00411 1230 aaKnown RBP19.26■□□□□ 0.67
XRCC1-208ENST00000598422 NFIXQ14938 502 aa19.26■□□□□ 0.67
XRCC1-208ENST00000598422 MIS18AQ9NYP9 233 aa19.26■□□□□ 0.67
XRCC1-208ENST00000598422 A0A0G2JLW4 131 aa19.25■□□□□ 0.67
XRCC1-208ENST00000598422 TM4SF1P30408 202 aa19.25■□□□□ 0.67
XRCC1-208ENST00000598422 RIPK4P57078 832 aa19.25■□□□□ 0.67
XRCC1-208ENST00000598422 USP16Q9Y5T5 823 aa19.25■□□□□ 0.67
XRCC1-208ENST00000598422 UTRNP46939 3433 aa19.25■□□□□ 0.67
XRCC1-208ENST00000598422 PRAMEF22A3QJZ6 481 aa19.24■□□□□ 0.67
XRCC1-208ENST00000598422 DPEP1P16444 411 aa19.24■□□□□ 0.67
XRCC1-208ENST00000598422 BICDL1Q6ZP65 573 aa19.24■□□□□ 0.67
XRCC1-208ENST00000598422 CCDC146Q8IYE0 955 aa19.24■□□□□ 0.67
XRCC1-208ENST00000598422 ZNF784Q8NCA9 323 aaPredicted RBP19.24■□□□□ 0.67
XRCC1-208ENST00000598422 TBC1D2BQ9UPU7 963 aa19.24■□□□□ 0.67
XRCC1-208ENST00000598422 BCL2L12Q9HB09 334 aa19.23■□□□□ 0.67
XRCC1-208ENST00000598422 BCS1LQ9Y276 419 aa19.23■□□□□ 0.67
XRCC1-208ENST00000598422 TMPOP42166 694 aaKnown RBP19.22■□□□□ 0.67
XRCC1-208ENST00000598422 PIP4K2AP48426 406 aaPredicted RBP19.22■□□□□ 0.67
XRCC1-208ENST00000598422 DZIP3Q86Y13 1208 aaKnown RBP19.22■□□□□ 0.67
XRCC1-208ENST00000598422 RUNDC1Q96C34 613 aa19.22■□□□□ 0.67
XRCC1-208ENST00000598422 SERPINB2P05120 415 aa19.21■□□□□ 0.67
XRCC1-208ENST00000598422 NEUROD2Q15784 382 aa19.21■□□□□ 0.67
XRCC1-208ENST00000598422 TSPYL4Q9UJ04 414 aa19.21■□□□□ 0.67
XRCC1-208ENST00000598422 RRP7AQ9Y3A4 280 aaKnown RBP19.21■□□□□ 0.67
XRCC1-208ENST00000598422 NPHP1O15259 732 aa19.2■□□□□ 0.66
XRCC1-208ENST00000598422 ADAMTS8Q9UP79 889 aa19.2■□□□□ 0.66
XRCC1-208ENST00000598422 ZNF316A6NFI3 1004 aaPredicted RBP19.19■□□□□ 0.66
XRCC1-208ENST00000598422 CAMTA2O94983 1202 aa19.19■□□□□ 0.66
XRCC1-208ENST00000598422 EIF4A1P60842 406 aaKnown RBP19.19■□□□□ 0.66
XRCC1-208ENST00000598422 TBC1D9BQ66K14 1250 aa19.19■□□□□ 0.66
XRCC1-208ENST00000598422 PIM2Q9P1W9 311 aa19.19■□□□□ 0.66
XRCC1-208ENST00000598422 ZNF652Q9Y2D9 606 aa19.19■□□□□ 0.66
XRCC1-208ENST00000598422 CARMIL3Q8ND23 1372 aa19.19■□□□□ 0.66
XRCC1-208ENST00000598422 GIGYF1O75420 1035 aaPredicted RBP19.18■□□□□ 0.66
XRCC1-208ENST00000598422 DALRD3Q5D0E6 543 aaKnown RBP19.18■□□□□ 0.66
XRCC1-208ENST00000598422 GOLGB1Q14789 3259 aaKnown RBP19.18■□□□□ 0.66
XRCC1-208ENST00000598422 CHRNA5P30532 468 aa19.17■□□□□ 0.66
XRCC1-208ENST00000598422 SETDB2Q96T68 719 aa19.17■□□□□ 0.66
XRCC1-208ENST00000598422 NBPF26B4DH59 902 aa19.16■□□□□ 0.66
XRCC1-208ENST00000598422 NBPF10Q6P3W6 841 aaKnown RBP19.16■□□□□ 0.66
XRCC1-208ENST00000598422 NBPF15Q8N660 670 aa19.16■□□□□ 0.66
XRCC1-208ENST00000598422 SCN7AQ01118 1682 aa19.16■□□□□ 0.66
XRCC1-208ENST00000598422 KIF13BQ9NQT8 1826 aa19.16■□□□□ 0.66
XRCC1-208ENST00000598422 BABAM1Q9NWV8 329 aa19.15■□□□□ 0.66
XRCC1-208ENST00000598422 KCNA3P22001 575 aa19.14■□□□□ 0.65
XRCC1-208ENST00000598422 CLEC4GQ6UXB4 293 aa19.14■□□□□ 0.65
XRCC1-208ENST00000598422 ARHGAP27Q6ZUM4 889 aa19.14■□□□□ 0.65
XRCC1-208ENST00000598422 CNBD1Q8NA66 436 aa19.14■□□□□ 0.65
XRCC1-208ENST00000598422 ST5P78524 1137 aa19.13■□□□□ 0.65
XRCC1-208ENST00000598422 C2CD5Q86YS7 1000 aa19.13■□□□□ 0.65
XRCC1-208ENST00000598422 NGEFQ8N5V2 710 aa19.13■□□□□ 0.65
XRCC1-208ENST00000598422 LAS1LQ9Y4W2 734 aaKnown RBP19.13■□□□□ 0.65
XRCC1-208ENST00000598422 CHD4Q14839 1912 aa19.12■□□□□ 0.65
XRCC1-208ENST00000598422 KIAA1551Q9HCM1 1747 aa19.12■□□□□ 0.65
XRCC1-208ENST00000598422 ATP10DQ9P241 1426 aa19.12■□□□□ 0.65
XRCC1-208ENST00000598422 H0YIN7 160 aa19.12■□□□□ 0.65
XRCC1-208ENST00000598422 ANP32CO43423 234 aa19.12■□□□□ 0.65
XRCC1-208ENST00000598422 KIF6Q6ZMV9 814 aa19.12■□□□□ 0.65
XRCC1-208ENST00000598422 DLG5Q8TDM6 1919 aa19.12■□□□□ 0.65
XRCC1-208ENST00000598422 KDM3BQ7LBC6 1761 aa19.11■□□□□ 0.65
XRCC1-208ENST00000598422 ERBB4Q15303 1308 aa19.11■□□□□ 0.65
XRCC1-208ENST00000598422 RGL2O15211 777 aa19.11■□□□□ 0.65
XRCC1-208ENST00000598422 MYL6BP14649 208 aa19.11■□□□□ 0.65
XRCC1-208ENST00000598422 PDE6BP35913 854 aa19.11■□□□□ 0.65
XRCC1-208ENST00000598422 PRR5LQ6MZQ0 368 aa19.11■□□□□ 0.65
XRCC1-208ENST00000598422 NBPF5PQ86XG9 351 aaPredicted RBP19.11■□□□□ 0.65
XRCC1-208ENST00000598422 TRIM35Q9UPQ4 493 aa19.11■□□□□ 0.65
XRCC1-208ENST00000598422 N4BP2Q86UW6 1770 aaPredicted RBP19.11■□□□□ 0.65
XRCC1-208ENST00000598422 EIF2S2P20042 333 aaKnown RBP19.1■□□□□ 0.65
XRCC1-208ENST00000598422 CCDC24Q8N4L8 307 aa19.1■□□□□ 0.65
XRCC1-208ENST00000598422 BRIP1Q9BX63 1249 aa19.1■□□□□ 0.65
XRCC1-208ENST00000598422 PDZRN3Q9UPQ7 1066 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms